Error in re-building vignettes:
  ...
Observations with missing time information found - removing 1 rows
Discrete time points created:  4
Extracting first non-missing value for time independent predictors
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
Running ctsemCarefulFit with 16 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4345.18029918369

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 25762712926.4318, 2988599.61949969, 514746.419212356, 354768.388562541, 2401.54106475358, 1771.41906591861, 700.422945945992, 417.995365385335, 307.528011978376, 80.9312529728637, 76.5096660159468, 0.064503626115966, 0.0000000000000431448135098157, -3.40613063692363e-18, -0.000394158396937386, -420.197413128141

Begin fit attempt 2 of at maximum 16 tries

 Lowest minimum so far:  4344.47977220695

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 226188866145.016, 26515941.0563872, 3174456.18606351, 1543442.08740492, 2397.15475004095, 2060.36291637377, 572.042441162827, 436.500406131466, 337.092552017628, 80.9253603355394, 28.3354530763129, 0.00000000000000480644975170214, 1.39676353810562e-17, -0.000327113338039587, -0.188080745895686, -572.445196317853

Begin fit attempt 3 of at maximum 16 tries

 Lowest minimum so far:  4344.44953366298

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 7177553350.86935, 24116801.5250444, 2967409.79551149, 1109775.85242874, 2396.98407238775, 1490.14335873274, 493.456898669256, 389.500416291251, 336.194605991069, 81.1302445500596, 54.0562524510732, 14.5254040001453, 0.0262683990599629, 0.00326751429018772, -8.9802047544887e-20, -0.0000000000000341848076584235

Begin fit attempt 4 of at maximum 16 tries

 Lowest minimum so far:  4344.34867770642

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

Begin fit attempt 5 of at maximum 16 tries

 Fit attempt worse than current best:  4355.74003950251 vs 4344.34867770642

Begin fit attempt 6 of at maximum 16 tries

 Fit attempt worse than current best:  4359.28362837294 vs 4344.34867770642

Begin fit attempt 7 of at maximum 16 tries

 Lowest minimum so far:  4298.37315056425

 Not all eigenvalues of Hessian are greater than 0: 32170.7996205747, 27887.710230098, 1900.11512262616, 1274.60327709378, 697.040367353461, 371.140585077622, 309.930486338589, 233.927921377875, 96.5768798083644, 6.69523004611953, 4.23636234130678, 1.26110461387861, 0.967071870450928, 0.0000000000000017129216296947, 2.61673087217628e-21, -0.0000597767301335822

Begin fit attempt 8 of at maximum 16 tries

 Lowest minimum so far:  4298.37315056425

 Not all eigenvalues of Hessian are greater than 0: 32170.8000346991, 27887.7128286939, 1900.11906898015, 1274.62620622197, 697.044677176923, 371.139471747155, 309.953481940361, 233.948794117643, 96.5852516944137, 6.71496010487282, 4.23872441260318, 1.26558250121798, 0.970475291966617, 0.0000648943994083583, -1.12771769657151e-19, -0.000000000000032145776912872

Begin fit attempt 9 of at maximum 16 tries

 Not all eigenvalues of Hessian are greater than 0: 32170.8000346991, 27887.7128286939, 1900.11906898015, 1274.62620622197, 697.044677176923, 371.139471747155, 309.953481940361, 233.948794117643, 96.5852516944137, 6.71496010487282, 4.23872441260318, 1.26558250121798, 0.970475291966617, 0.0000648943994083583, -1.12771769657151e-19, -0.000000000000032145776912872

Begin fit attempt 10 of at maximum 16 tries

Solution found

Running ctsemCarefulFit with 15 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4196.73541494046

Solution found

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 16 parameters
Running ctsemCarefulFit with 19 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4151.1313211327

Solution found

Plotting fit
Plotting fit
Running ctsemCarefulFit with 23 parameters

Begin fit attempt 1 of at maximum 16 tries

 Fit attempt generated errors

Begin fit attempt 2 of at maximum 16 tries

 Lowest minimum so far:  4285.63643170348

 Not all eigenvalues of Hessian are greater than 0: 43659.8143330896, 3532.08646616619, 1689.31289199627, 906.553204441235, 491.950312779006, 399.997182764754, 265.575578481233, 223.766629407101, 197.188799512252, 187.910948729178, 155.303615417354, 148.761636099368, 132.976685946424, 36.5209284602982, 0.0644630230330804, 0.0629378259717344, 0.00550404952334249, 0.0000247220609003924, 0.00000000000000700958028265529, 4.24023832759571e-18, -0.00000000000000461002993603765, -0.0000000000000563985759766582, -0.0000790020847041408

Begin fit attempt 3 of at maximum 16 tries

 Lowest minimum so far:  4282.35373642775

 Not all eigenvalues of Hessian are greater than 0: 46850.9304000027, 3263.56025890353, 1411.29531563236, 785.882714985573, 498.708210337899, 399.995920052057, 314.289150367326, 227.125465158905, 203.545527398545, 197.188850527, 152.100213412115, 96.8440626300739, 41.6543586977652, 15.2988089415572, 0.000329476756046134, 0.00000957143750023893, 0.000000000116525985334085, 0.0000000000000770635356979041, 0.0000000000000251460727113114, 3.0881618447403e-22, -4.26762310173081e-17, -0.0000000000000356728724671219, -0.000279802399264042

Begin fit attempt 4 of at maximum 16 tries

 Lowest minimum so far:  4282.35373642191

 Not all eigenvalues of Hessian are greater than 0: 46850.970414904, 3263.55742614477, 1411.29866318064, 785.893000051901, 498.708928350693, 399.995262688442, 314.307080455843, 227.130518414119, 203.546506407046, 197.195201797124, 152.10707952132, 96.8549677352619, 41.6603744927495, 15.2988990498782, 0.000329443472678834, 0.00000957154252209455, 0.000000000116857580474847, 0.0000000000000338851856745282, 0.000000000000000338339009117921, -1.34529770823191e-23, -2.35221037177963e-17, -0.0000000000000353881076368936, -0.000279800434506067

Begin fit attempt 5 of at maximum 16 tries

 Fit attempt worse than current best:  12008.8644601236 vs 4282.35373642191

Begin fit attempt 6 of at maximum 16 tries

 Fit attempt worse than current best:  4424.24251986334 vs 4282.35373642191

Begin fit attempt 7 of at maximum 16 tries

 Fit attempt generated errors

Begin fit attempt 8 of at maximum 16 tries

 Fit attempt generated errors

Begin fit attempt 9 of at maximum 16 tries

 Lowest minimum so far:  4259.92417582054

 Not all eigenvalues of Hessian are greater than 0: 21772.7606687499, 6219.56858454807, 1158.98735193957, 544.071486730038, 400.002972412215, 321.617514047574, 304.484418394474, 263.481904012613, 199.04504942417, 197.204306374705, 144.243659387216, 129.212316334088, 95.7861787166975, 42.2464781708837, 39.4559232695223, 19.045200868378, 2.66554901742874, 0.423885180577774, 0.0661522030965772, 0.000190423720510815, 0.0000882899447816238, -0.00000000000000833187685386656, -0.000016405320045624

Begin fit attempt 10 of at maximum 16 tries

 Lowest minimum so far:  4259.92417581374

 Not all eigenvalues of Hessian are greater than 0: 21773.3321014535, 6219.68091813032, 1159.0159602016, 544.071209381185, 400.003651735003, 321.572186432995, 304.486522758184, 263.489155766865, 199.045696613912, 197.203594133814, 144.252891644452, 129.216427824843, 95.7766518444135, 42.2421434289283, 39.454136870417, 19.0446108656808, 2.66540232063411, 0.423793778684225, 0.0664458730539791, 0.000194841617765462, 0.0000908197740499491, -0.000000000000000155610119351787, -0.0000058730544940003

Begin fit attempt 11 of at maximum 16 tries

 Not all eigenvalues of Hessian are greater than 0: 21773.3321014535, 6219.68091813032, 1159.0159602016, 544.071209381185, 400.003651735003, 321.572186432995, 304.486522758184, 263.489155766865, 199.045696613912, 197.203594133814, 144.252891644452, 129.216427824843, 95.7766518444135, 42.2421434289283, 39.454136870417, 19.0446108656808, 2.66540232063411, 0.423793778684225, 0.0664458730539791, 0.000194841617765462, 0.0000908197740499491, -0.000000000000000155610119351787, -0.0000058730544940003

Begin fit attempt 12 of at maximum 16 tries

 Not all eigenvalues of Hessian are greater than 0: 21764.3780410639, 6143.59385128531, 1153.88173486728, 544.075314236769, 400.003661993194, 321.594937211237, 304.407081275651, 263.488938800896, 199.043145924505, 197.195881491602, 144.200312974149, 129.049415171946, 95.7845770750834, 42.573639956608, 40.4191219885769, 19.414618072005, 2.75783270096357, 0.43838046945323, 0.0682709274240706, 0.000108013431707113, 0.0000287363979607866, 0.000000000000000187306086966472, -0.0000268754855537778

Begin fit attempt 13 of at maximum 16 tries

 Fit attempt worse than current best:  4276.07116035868 vs 4259.92417581374

Begin fit attempt 14 of at maximum 16 tries

 Not all eigenvalues of Hessian are greater than 0: 21793.5536895566, 6405.76536237211, 1170.87400524014, 544.062655577161, 400.012063111385, 321.560510337153, 304.676085502878, 263.478427956084, 199.046750131647, 197.204294024026, 144.355689632571, 129.605782368546, 95.7842739575988, 41.9956227889179, 36.7944887029826, 18.188917939977, 2.46167924808445, 0.391473950487725, 0.0613478249132414, 0.000109897082645053, 0.0000784916068227667, 0.0000230352174638868, -0.000000000000000496138158900297

Begin fit attempt 15 of at maximum 16 tries

 Not all eigenvalues of Hessian are greater than 0: 25010.574725889, 15860.8942656036, 1388.95800114228, 543.920814037518, 400.005020207089, 321.544991108139, 308.836529448728, 263.461219089377, 199.258235076254, 197.196555690314, 154.882897486518, 137.665178376165, 95.8606941760042, 42.0134758373963, 9.71604464992246, 1.01111705334643, 0.385314367966843, 0.0623467775066809, 0.0097173562129847, 0.0000333272228631287, 0.0000000000000257600884483808, -0.00000507754019431037, -0.000118886504449315

Begin fit attempt 16 of at maximum 16 tries

 Not all eigenvalues of Hessian are greater than 0: 21760.8262286631, 6111.12784652915, 1151.65063990084, 544.077459117377, 400.00296097084, 321.597373987409, 304.38110280091, 263.49210821305, 199.043330249736, 197.204295840169, 144.197548752167, 128.985437178366, 95.7821410656201, 42.8325852892447, 40.736008815559, 19.5722019581172, 2.79906098312557, 0.444830191984581, 0.0693979501867481, 0.000126066877443269, 0.000027962925636619, -0.000000000000000216623594930369, -0.00000585532359607557

Retry limit reached
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
No missing time dependent predictors - TDPREDVAR and TDPREDMEANS fixed to observed moments for speed
Running ctsemCarefulFit with 18 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  -692.13116974276

 Not all eigenvalues of Hessian are greater than 0: 8301.11837438483, 4391.86278028029, 713.06032772648, 516.427296893348, 194.882192744612, 155.846340833666, 112.745777355757, 61.582935003919, 26.1705085301884, 24.3415472164753, 20.2555841286977, 15.725038211119, 9.50579693762873, 6.29207372917803, 4.80240106443273, 0.641904367157557, -0.000000000000000631927236227884, -0.000013603260782237

Begin fit attempt 2 of at maximum 16 tries

 Lowest minimum so far:  -692.13116974276

Solution found

No missing time dependent predictors - TDPREDVAR and TDPREDMEANS fixed to observed moments for speed
transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.
Running ctsemCarefulFit with 18 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  -690.337113171428

Solution found

Single subject dataset or Kalman objective specified - ignoring any specified between subject 
      variance matrices (TRAITVAR, T0TRAITEFFECT,MANIFESTTRAITVAR, TIPREDEFFECT, TIPREDVAR, TDTIPREDCOV, T0TIPREDEFFECT)
Running ctsemCarefulFit with 10 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  -119.382333796713

Solution found

Begin carefulFit start value estimation for group g1
Begin carefulFit start value estimation for group g2

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  7.71913101579037

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 122853.564069179, 46506.0504146083, 27712.6092499405, 15132.9433923826, 5965.30361689119, 1420.72071359142, 1292.27498985686, 1161.49307788796, 311.109655235557, 164.253430145978, 85.0281824280198, 28.24066309039, -2.13360852834562e-26

Begin fit attempt 2 of at maximum 16 tries

 Lowest minimum so far:  7.71913101537524

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 122853.55685196, 46506.0300182083, 27712.6087693029, 15132.9448678126, 5965.30356375736, 1420.71665530484, 1292.27830190477, 1161.4888474708, 311.109777435577, 164.247127956561, 85.0250223350265, 28.2403315692002, -1.15322411746852e-27

Begin fit attempt 3 of at maximum 16 tries

 Lowest minimum so far:  7.719131009688

 Not all eigenvalues of Hessian are greater than 0: 122852.806586336, 46505.6740211068, 27712.4296672626, 15132.8356006392, 5965.31523565729, 1420.71278147192, 1292.27477753881, 1161.49908942912, 311.110700180222, 164.249027655766, 85.0252345236937, 28.2376050927456, -0.000000000000113686837721703

Begin fit attempt 4 of at maximum 16 tries

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 122853.274803169, 46505.9840261193, 27712.5889309777, 15132.9248395402, 5965.30495959905, 1420.71743163093, 1292.27490199481, 1161.48938148934, 311.110629853424, 164.244986285423, 85.022971552965, 28.2355816260208, -0.0000000000000507669796535053

Begin fit attempt 5 of at maximum 16 tries

 Lowest minimum so far:  -70.8548131911836

Solution found

T0VAR contained character labels - setting matrix to diagonal 0.00001
T0MEANS contained character labels - setting matrix to 0
MANIFESTMEANS contained character labels - setting matrix to 0
Discrete time points created:  200
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
Plotting rows 1, 
Single subject dataset or Kalman objective specified - ignoring any specified between subject 
      variance matrices (TRAITVAR, T0TRAITEFFECT,MANIFESTTRAITVAR, TIPREDEFFECT, TIPREDVAR, TDTIPREDCOV, T0TIPREDEFFECT)
transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.
Running ctsemCarefulFit with 7 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  735.750087175518

Solution found

transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  -3462.15389493048

Solution found

Running ctsemCarefulFit with 16 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4285.19277879219

Solution found

Running ctsemCarefulFit with 19 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4151.1313211327

Solution found

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 19 parameters
Running ctsemCarefulFit with 19 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4208.25569679577

Solution found

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 19 parameters
Unique discreteDRIFT calculations per step required = 5
Unique discreteCINT calculations per step required = 5
Unique discreteDIFFUSION calculations per step required = 5
2 / 2 latent variables required for covariance calculations
Compiling model, ignore forthcoming warning re number of chains...
the number of chains is less than 1; sampling not done
Sampling...
The following numerical problems occurred the indicated number of times on chain 1
                                                                            count
Exception thrown at line 385: multiply: A[1] is nan, but must not be nan!       5
Exception thrown at line 247: multiply: A[22] is -nan, but must not be nan!     1
Exception thrown at line 447: multiply: A[1] is -nan, but must not be nan!      1
When a numerical problem occurs, the Hamiltonian proposal gets rejected.
See http://mc-stan.org/misc/warnings.html#exception-hamiltonian-proposal-rejected
If the number in the 'count' column is small, there is no need to ask about this message on stan-users.
The following numerical problems occurred the indicated number of times on chain 2
                                                                            count
Exception thrown at line 385: multiply: A[1] is nan, but must not be nan!       3
Exception thrown at line 247: multiply: A[21] is -nan, but must not be nan!     1
Exception thrown at line 385: multiply: B[1] is -nan, but must not be nan!      1
Exception thrown at line 444: multiply: B[1] is -nan, but must not be nan!      1
When a numerical problem occurs, the Hamiltonian proposal gets rejected.
See http://mc-stan.org/misc/warnings.html#exception-hamiltonian-proposal-rejected
If the number in the 'count' column is small, there is no need to ask about this message on stan-users.
Warning: There were 200 transitions after warmup that exceeded the maximum treedepth. Increase max_treedepth above 6. See
http://mc-stan.org/misc/warnings.html#maximum-treedepth-exceeded
Warning: Examine the pairs() plot to diagnose sampling problems

Getting discreteDRIFT, may take a moment...
Unique discreteDRIFT calculations per step required = 1
Unique discreteCINT calculations per step required = 1
Unique discreteDIFFUSION calculations per step required = 1
2 / 2 latent variables required for covariance calculations
Compiling model, ignore forthcoming warning re number of chains...
the number of chains is less than 1; sampling not done
Sampling...
The following numerical problems occurred the indicated number of times on chain 2
                                                                          count
Exception thrown at line 308: multiply: A[1] is nan, but must not be nan!     7
When a numerical problem occurs, the Hamiltonian proposal gets rejected.
See http://mc-stan.org/misc/warnings.html#exception-hamiltonian-proposal-rejected
If the number in the 'count' column is small, there is no need to ask about this message on stan-users.
The following numerical problems occurred the indicated number of times on chain 1
                                                                                    count
Exception thrown at line 308: multiply: A[1] is nan, but must not be nan!               7
Exception thrown at line 368: cholesky_decompose: Matrix m is not positive definite     4
When a numerical problem occurs, the Hamiltonian proposal gets rejected.
See http://mc-stan.org/misc/warnings.html#exception-hamiltonian-proposal-rejected
If the number in the 'count' column is small, there is no need to ask about this message on stan-users.
Warning: There were 13 divergent transitions after warmup. Increasing adapt_delta above 0.9 may help. See
http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
Warning: Examine the pairs() plot to diagnose sampling problems

Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet,  : 
  Running ‘texi2dvi’ on ‘hierarchical.tex’ failed.
LaTeX errors:
! Dimension too large.
\fb@put@frame ...p \ifdim \dimen@ >\ht \@tempboxa 
                                                  \fb@putboxa #1\fb@afterfra...
l.2052 \end{kframe}
                   
! Dimension too large.
\fb@put@frame ...p \ifdim \dimen@ >\ht \@tempboxa 
                                                  \fb@putboxa #1\fb@afterfra...
l.2052 \end{kframe}
                   
! Dimension too large.
\fb@put@frame ...p \ifdim \dimen@ >\ht \@tempboxa 
                                                  \fb@putboxa #1\fb@afterfra...
l.2052 \end{kframe}
                   
! Dimension too large.
\fb@put@frame ...p \ifdim \dimen@ >\ht \@tempboxa 
                                                  \fb@putboxa #1\fb@afterfra...
l.2052 \end{kframe}
                   
! Dimension too large.
\fb@put@frame ...p \ifdim \dimen@ >\ht \@tempboxa 
                                                  \fb@putboxa #1\fb@a
Calls: buildVignettes -> texi2pdf -> texi2dvi
Execution halted