Error in re-building vignettes:
  ...
Observations with missing time information found - removing 1 rows
Discrete time points created:  4
Extracting first non-missing value for time independent predictors
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
Running ctsemCarefulFit with 16 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4345.16619414188

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 11968169755.4727, 2305347.43332266, 325812.548413978, 271958.464229852, 2401.3364241815, 1778.94952039478, 675.617460712029, 411.533710353421, 338.926844933593, 82.8827641659354, 80.6939981491883, 0.0822596579293518, 0.0000000000000261168160817441, 7.9983902458187e-18, -0.000883409952793771, -505.36800017997

Begin fit attempt 2 of at maximum 16 tries

 Lowest minimum so far:  4345.04298586341

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 14466214935.9961, 2749742.83882781, 366188.800076096, 330039.313864182, 2397.80160859793, 1793.65795056451, 687.204980667165, 422.93316868093, 337.59706166389, 81.7322787042038, 78.7802169238019, 0.0921954530646353, 0.00000000000000803819311996539, 0.000000000000000732616399935304, -0.000550288377592211, -432.251650975622

Begin fit attempt 3 of at maximum 16 tries

 Lowest minimum so far:  4344.54119098604

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 266906823537.12, 86869853.236793, 10434156.1989394, 3928784.49853919, 2398.24325321783, 1747.40602522068, 508.212590542846, 411.8548866628, 336.636439478697, 106.30087079908, 81.0203236299424, 21.0304830921386, 0.0135487437491133, -8.64951890047145e-17, -0.000000000000000897424207333621, -0.000147614201769563

Begin fit attempt 4 of at maximum 16 tries

 Fit attempt worse than current best:  5121.73113144925 vs 4344.54119098604

Begin fit attempt 5 of at maximum 16 tries

 Lowest minimum so far:  4176.87456133366

Solution found

Running ctsemCarefulFit with 15 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4196.73541494047

Solution found

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 16 parameters
Running ctsemCarefulFit with 19 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4151.1313211327

Solution found

Plotting fit
Plotting fit
Running ctsemCarefulFit with 23 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4245.25700750461

Solution found

MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
MANIFESTMEANS contained character labels - setting matrix to 0
MANIFESTVAR contained character labels - setting matrix to diagonal 0.00001
TDPREDVAR contained character labels - setting matrix to diagonal 0.00001
Discrete time points created:  19
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
No missing time dependent predictors - TDPREDVAR and TDPREDMEANS fixed to observed moments for speed
Running ctsemCarefulFit with 21 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  -696.245094961827

 Not all eigenvalues of Hessian are greater than 0: 11523.7133266342, 6731.18837049385, 878.068391525803, 749.694719438287, 228.380507442085, 197.332382833533, 120.815196680336, 61.3593601578339, 31.6998468230014, 26.7028348545656, 23.7746516952663, 19.997890787821, 18.0132355004943, 16.0352405455036, 14.0726174337673, 7.7714838543032, 3.21635340657295, 1.65410600928561, 0.173746655187788, 4.79927321949754e-19, -0.00000000000000642329646028759

Begin fit attempt 2 of at maximum 16 tries

 Lowest minimum so far:  -696.245094961827

 Not all eigenvalues of Hessian are greater than 0: 11523.7147692678, 6731.19128198555, 878.071600837815, 749.695957386512, 228.382320209515, 197.326647898079, 120.81773855911, 61.3626874585005, 31.7003526607295, 26.7023103763695, 23.7784404872215, 19.9997428044409, 18.0133758916565, 16.0377375636564, 14.0769965738919, 7.78046584934539, 3.21982229209011, 1.65868060058479, 0.174226733189952, -0.00000000000000366673436698397, -0.0000000000317871833057261

Begin fit attempt 3 of at maximum 16 tries

 Not all eigenvalues of Hessian are greater than 0: 11523.7147692678, 6731.19128198555, 878.071600837815, 749.695957386512, 228.382320209515, 197.326647898079, 120.81773855911, 61.3626874585005, 31.7003526607295, 26.7023103763695, 23.7784404872215, 19.9997428044409, 18.0133758916565, 16.0377375636564, 14.0769965738919, 7.78046584934539, 3.21982229209011, 1.65868060058479, 0.174226733189952, -0.00000000000000366673436698397, -0.0000000000317871833057261

Begin fit attempt 4 of at maximum 16 tries

 Lowest minimum so far:  -696.245094961832

Solution found

No missing time dependent predictors - TDPREDVAR and TDPREDMEANS fixed to observed moments for speed
transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.
Running ctsemCarefulFit with 21 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  -699.386824292274

 Not all eigenvalues of Hessian are greater than 0: 10009.4761945221, 4495.39346338926, 2192.6546796053, 915.601740048357, 239.160288809862, 152.890261549143, 138.423992179049, 112.440883425412, 50.5082939168886, 30.634971948506, 24.1269756920839, 22.2592891105134, 18.7740609810543, 16.9291541517296, 15.118760929335, 10.9443402465995, 6.11433360812791, 5.06592778259945, 1.4740745396305, 0.768618131888512, -0.0000208505049394243

Begin fit attempt 2 of at maximum 16 tries

 Lowest minimum so far:  -699.386824292275

 Not all eigenvalues of Hessian are greater than 0: 10009.4906670546, 4495.41693868657, 2192.65089077794, 915.616264682653, 239.190660821277, 152.908642736824, 138.42388423741, 112.46029452074, 50.5244973804077, 30.6354638947068, 24.1200375028714, 22.2679771091341, 18.7902341059894, 16.9352465898188, 15.1319536452176, 10.9652364195834, 6.12824107010719, 5.08632650056755, 1.47800668495, 0.772412366821058, -0.0000000107762737558921

Begin fit attempt 3 of at maximum 16 tries

 Not all eigenvalues of Hessian are greater than 0: 10009.4906670546, 4495.41693868657, 2192.65089077794, 915.616264682653, 239.190660821277, 152.908642736824, 138.42388423741, 112.46029452074, 50.5244973804077, 30.6354638947068, 24.1200375028714, 22.2679771091341, 18.7902341059894, 16.9352465898188, 15.1319536452176, 10.9652364195834, 6.12824107010719, 5.08632650056755, 1.47800668495, 0.772412366821058, -0.0000000107762737558921

Begin fit attempt 4 of at maximum 16 tries

 Not all eigenvalues of Hessian are greater than 0: 10009.4802948714, 4495.40171541435, 2192.65394529565, 915.613812549758, 239.180946149515, 152.899982554109, 138.422883442255, 112.45544867283, 50.5229437241535, 30.6357800793099, 24.1253671992643, 22.2669313665237, 18.7815452917756, 16.9318906319258, 15.1255649599943, 10.9566285202647, 6.12635529849098, 5.07680984756976, 1.47461366130966, 0.768904974524468, -0.000013160876613676

Begin fit attempt 5 of at maximum 16 tries

 Lowest minimum so far:  -699.386824294133

 Not all eigenvalues of Hessian are greater than 0: 10009.4825331811, 4495.40199377837, 2192.65242499894, 915.60694497873, 239.188292433763, 152.899270345283, 138.423336218085, 112.458460679505, 50.5205320307618, 30.635131025827, 24.1252985070736, 22.2677616115397, 18.7775317364482, 16.9307282417587, 15.1214390634712, 10.9587780522464, 6.12142562838365, 5.08063321444314, 1.475070474741, 0.770566005632104, -0.00000000232342131626688

Begin fit attempt 6 of at maximum 16 tries

 Lowest minimum so far:  -699.386824294134

Solution found

Single subject dataset or Kalman objective specified - ignoring any specified between subject 
      variance matrices (TRAITVAR, T0TRAITEFFECT,MANIFESTTRAITVAR, TIPREDEFFECT, TIPREDVAR, TDTIPREDCOV, T0TIPREDEFFECT)
Running ctsemCarefulFit with 10 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  -118.068727887277

Solution found

Begin carefulFit start value estimation for group g1
Begin carefulFit start value estimation for group g2

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  -70.8548131896258

Solution found

T0VAR contained character labels - setting matrix to diagonal 0.00001
T0MEANS contained character labels - setting matrix to 0
MANIFESTMEANS contained character labels - setting matrix to 0
Discrete time points created:  200
imputedefs==FALSE (default, recommended) so setting observations with no time value to NA
Plotting rows 1, 
Single subject dataset or Kalman objective specified - ignoring any specified between subject 
      variance matrices (TRAITVAR, T0TRAITEFFECT,MANIFESTTRAITVAR, TIPREDEFFECT, TIPREDVAR, TDTIPREDCOV, T0TIPREDEFFECT)
transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.
Running ctsemCarefulFit with 7 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  753.827773619172

Solution found

transformedParams=TRUE and non positive DIFFUSION diagonal specified, setting to .00001.

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  -3462.15389493048

Solution found

Running ctsemCarefulFit with 16 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4345.16924542368

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 14084871158.2079, 2186357.37494269, 380179.712820148, 259647.676330096, 2396.8151884537, 1548.4681044074, 705.97507871435, 386.306778024886, 341.95555355545, 81.8180611820248, 69.7024592560567, 0.10172820300048, -4.14999517742259e-18, -0.0000000000000181549756070358, -0.000133107374948529, -292.580951816132

Begin fit attempt 2 of at maximum 16 tries

 Lowest minimum so far:  4344.4217000167

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 476845555927.476, 81885904.8748185, 9869652.15390646, 3830610.91724257, 2396.2848995794, 1950.19538894964, 703.397208358199, 474.234383609053, 344.195980594652, 284.912867258552, 80.8517156071702, 4.39034567588661, 0.0000000000000242958279691692, 0.0000000000000100078372502457, -0.0000430885282021557, -0.110718645965309

Begin fit attempt 3 of at maximum 16 tries

 Lowest minimum so far:  4344.42169987509

 OpenMx status code 6 not in list of acceptable status codes, 0
 OpenMx status code 6 not in list of acceptable status codes, 0

 Not all eigenvalues of Hessian are greater than 0: 476858075533.292, 81889408.7009688, 9869941.18889363, 3830654.24926619, 2396.59421946264, 2360.91818868588, 1269.882452105, 505.073622933212, 345.722071210808, 307.29669475638, 102.49128465315, 80.8539642654255, 0.0911464656212898, 0.0000345842540807952, -0.000000000000000241350486160149, -0.0000000000000849192211690987

Begin fit attempt 4 of at maximum 16 tries

 Fit attempt worse than current best:  155432.127505439 vs 4344.42169987509

Begin fit attempt 5 of at maximum 16 tries

 Lowest minimum so far:  4176.87456133366

Solution found

Running ctsemCarefulFit with 19 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4151.1313211327

Solution found

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 19 parameters
Running ctsemCarefulFit with 19 parameters

Begin fit attempt 1 of at maximum 16 tries

 Lowest minimum so far:  4203.31303209733

Solution found

NPSOL optimizer not available - switching to CSOLNP - consider installing OpenMx using command:  source('http://openmx.psyc.virginia.edu/getOpenMx.R') 
Running ctsem with 19 parameters
Unique discreteDRIFT calculations per step required = 5
Unique discreteCINT calculations per step required = 5
Unique discreteDIFFUSION calculations per step required = 5
2 / 2 latent variables required for covariance calculations
Compiling model, ignore forthcoming warning re number of chains...
the number of chains is less than 1; sampling not done
Sampling...
passing deprecated arguments: enable_random_init.
passing deprecated arguments: enable_random_init.
passing deprecated arguments: enable_random_init.
The following numerical problems occurred the indicated number of times on chain 1
                                                                            count
Exception thrown at line 383: multiply: A[1] is nan, but must not be nan!       5
Exception thrown at line 247: multiply: A[22] is -nan, but must not be nan!     1
Exception thrown at line 445: multiply: A[1] is -nan, but must not be nan!      1
When a numerical problem occurs, the Hamiltonian proposal gets rejected.
See http://mc-stan.org/misc/warnings.html#exception-hamiltonian-proposal-rejected
If the number in the 'count' column is small, there is no need to ask about this message on stan-users.
The following numerical problems occurred the indicated number of times on chain 2
                                                                            count
Exception thrown at line 383: multiply: A[1] is nan, but must not be nan!       3
Exception thrown at line 247: multiply: A[21] is -nan, but must not be nan!     1
Exception thrown at line 383: multiply: B[1] is -nan, but must not be nan!      1
Exception thrown at line 442: multiply: B[1] is -nan, but must not be nan!      1
When a numerical problem occurs, the Hamiltonian proposal gets rejected.
See http://mc-stan.org/misc/warnings.html#exception-hamiltonian-proposal-rejected
If the number in the 'count' column is small, there is no need to ask about this message on stan-users.
Warning: There were 200 transitions after warmup that exceeded the maximum treedepth. Increase max_treedepth above 6. See
http://mc-stan.org/misc/warnings.html#maximum-treedepth-exceeded
Warning: Examine the pairs() plot to diagnose sampling problems

Getting discreteDRIFT, may take a moment...
Unique discreteDRIFT calculations per step required = 1
Unique discreteCINT calculations per step required = 1
Unique discreteDIFFUSION calculations per step required = 1
2 / 2 latent variables required for covariance calculations
Compiling model, ignore forthcoming warning re number of chains...
the number of chains is less than 1; sampling not done
Sampling...
passing deprecated arguments: enable_random_init.
passing deprecated arguments: enable_random_init.
passing deprecated arguments: enable_random_init.
The following numerical problems occurred the indicated number of times on chain 2
                                                                                    count
Exception thrown at line 306: multiply: A[1] is nan, but must not be nan!               7
Exception thrown at line 366: cholesky_decompose: Matrix m is not positive definite     4
When a numerical problem occurs, the Hamiltonian proposal gets rejected.
See http://mc-stan.org/misc/warnings.html#exception-hamiltonian-proposal-rejected
If the number in the 'count' column is small, there is no need to ask about this message on stan-users.
The following numerical problems occurred the indicated number of times on chain 1
                                                                                    count
Exception thrown at line 306: multiply: A[1] is nan, but must not be nan!               7
Exception thrown at line 366: cholesky_decompose: Matrix m is not positive definite     1
When a numerical problem occurs, the Hamiltonian proposal gets rejected.
See http://mc-stan.org/misc/warnings.html#exception-hamiltonian-proposal-rejected
If the number in the 'count' column is small, there is no need to ask about this message on stan-users.
Warning: There were 10 divergent transitions after warmup. Increasing adapt_delta above 0.9 may help. See
http://mc-stan.org/misc/warnings.html#divergent-transitions-after-warmup
Warning: Examine the pairs() plot to diagnose sampling problems

Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet,  : 
  Running 'texi2dvi' on 'hierarchical.tex' failed.
LaTeX errors:
! Dimension too large.
\fb@put@frame ...p \ifdim \dimen@ >\ht \@tempboxa 
                                                  \fb@putboxa #1\fb@afterfra...
l.2210 \end{kframe}
                   
! Dimension too large.
\fb@put@frame ...p \ifdim \dimen@ >\ht \@tempboxa 
                                                  \fb@putboxa #1\fb@afterfra...
l.2210 \end{kframe}
                   
! Dimension too large.
\fb@put@frame ...p \ifdim \dimen@ >\ht \@tempboxa 
                                                  \fb@putboxa #1\fb@afterfra...
l.2210 \end{kframe}
                   
! Dimension too large.
\fb@put@frame ...p \ifdim \dimen@ >\ht \@tempboxa 
                                                  \fb@putboxa #1\fb@afterfra...
l.2210 \end{kframe}
                   
! Dimension too large.
\fb@put@frame ...p \ifdim \dimen@ >\ht \@tempboxa 
                                                  \fb@putboxa #1\fb@afterfra.
Calls: buildVignettes -> texi2pdf -> texi2dvi
Execution halted