NB: .First.lib is obsolete and will not be used in R >= 3.0.0

NSAByTotalAndFracB.matrix: no visible global function definition for
  'throw'
NSANormalization: no visible global function definition for 'throw'
NSANormalization: no visible global function definition for
  'getChipType'
NSANormalization: no visible global function definition for
  'nbrOfFiles'
NSANormalization: no visible global function definition for 'getNames'
NSANormalization: no visible global function definition for 'extend'
NSANormalization: no visible global function definition for 'Object'
NSANormalization: no visible global function definition for 'setTags'
SNPsNormalization: no visible global function definition for 'throw'
SNPsNormalization: no visible global function definition for
  'getChipType'
SNPsNormalization: no visible global function definition for 'getNames'
SNPsNormalization: no visible global function definition for 'extend'
SNPsNormalization: no visible global function definition for 'Object'
SNPsNormalization: no visible global function definition for 'setTags'
SampleNormalization: no visible global function definition for 'throw'
SampleNormalization: no visible global function definition for
  'getChipType'
SampleNormalization: no visible global function definition for
  'nbrOfFiles'
SampleNormalization: no visible global function definition for
  'getNames'
SampleNormalization: no visible global function definition for 'extend'
SampleNormalization: no visible global function definition for 'Object'
SampleNormalization: no visible global function definition for
  'setTags'
allocateOutputDataSets.NSANormalization: no visible global function
  definition for 'getPath'
allocateOutputDataSets.NSANormalization: no visible global function
  definition for 'getName'
allocateOutputDataSets.NSANormalization: no visible global function
  definition for 'getFile'
allocateOutputDataSets.NSANormalization: no visible global function
  definition for 'getPathname'
allocateOutputDataSets.NSANormalization: no visible global function
  definition for 'newInstance'
allocateOutputDataSets.NSANormalization: no visible global function
  definition for 'throw'
allocateOutputDataSets.NSANormalization: no visible global function
  definition for 'byPath'
allocateOutputDataSets.SNPsNormalization: no visible global function
  definition for 'getPath'
allocateOutputDataSets.SNPsNormalization: no visible global function
  definition for 'getName'
allocateOutputDataSets.SNPsNormalization: no visible global function
  definition for 'getFile'
allocateOutputDataSets.SNPsNormalization: no visible global function
  definition for 'nbrOfFiles'
allocateOutputDataSets.SNPsNormalization: no visible global function
  definition for 'getPathname'
allocateOutputDataSets.SNPsNormalization: no visible global function
  definition for 'newInstance'
allocateOutputDataSets.SNPsNormalization: no visible global function
  definition for 'throw'
allocateOutputDataSets.SNPsNormalization: no visible global function
  definition for 'byPath'
allocateOutputDataSets.SNPsNormalization: no visible global function
  definition for 'getPathnames'
allocateOutputDataSets.SampleNormalization: no visible global function
  definition for 'getPath'
allocateOutputDataSets.SampleNormalization: no visible global function
  definition for 'getName'
allocateOutputDataSets.SampleNormalization: no visible global function
  definition for 'getFile'
allocateOutputDataSets.SampleNormalization: no visible global function
  definition for 'nbrOfFiles'
allocateOutputDataSets.SampleNormalization: no visible global function
  definition for 'getPathname'
allocateOutputDataSets.SampleNormalization: no visible global function
  definition for 'newInstance'
allocateOutputDataSets.SampleNormalization: no visible global function
  definition for 'throw'
allocateOutputDataSets.SampleNormalization: no visible global function
  definition for 'byPath'
allocateOutputDataSets.SampleNormalization: no visible global function
  definition for 'getPathnames'
findArraysTodo.NSANormalization: no visible global function definition
  for 'getNames'
findArraysTodo.NSANormalization: no visible global function definition
  for 'getChipType'
findArraysTodo.NSANormalization: no visible binding for global variable
  'AffymetrixCdfFile'
findArraysTodo.NSANormalization: no visible global function definition
  for 'getGenomeInformation'
findArraysTodo.NSANormalization: no visible global function definition
  for 'getUnitsOnChromosome'
findArraysTodo.NSANormalization: no visible global function definition
  for 'getFile'
findArraysTodo.NSANormalization: no visible global function definition
  for 'getName'
findArraysTodo.SampleNormalization: no visible global function
  definition for 'getNames'
findArraysTodo.SampleNormalization: no visible global function
  definition for 'getChipType'
findArraysTodo.SampleNormalization: no visible binding for global
  variable 'AffymetrixCdfFile'
findArraysTodo.SampleNormalization: no visible global function
  definition for 'getGenomeInformation'
findArraysTodo.SampleNormalization: no visible global function
  definition for 'getUnitsOnChromosome'
findArraysTodo.SampleNormalization: no visible global function
  definition for 'getFile'
findArraysTodo.SampleNormalization: no visible global function
  definition for 'getName'
findUnitsTodo.SNPsNormalization: no visible global function definition
  for 'getFullNames'
findUnitsTodo.SNPsNormalization: no visible global function definition
  for 'getFile'
fitNSA.matrix: no visible binding for global variable 'verbose'
fitOneNSA: no visible global function definition for 'CNA'
fitOneNSA: no visible global function definition for 'segment'
fitSNPsN: no visible global function definition for 'rowMedians'
getFullName.NSANormalization: no visible global function definition for
  'getName'
getFullName.NSANormalization: no visible global function definition for
  'getTags'
getFullName.SNPsNormalization: no visible global function definition
  for 'getName'
getFullName.SNPsNormalization: no visible global function definition
  for 'getTags'
getFullName.SampleNormalization: no visible global function definition
  for 'getName'
getFullName.SampleNormalization: no visible global function definition
  for 'getTags'
getName.NSANormalization: no visible global function definition for
  'getName'
getName.SNPsNormalization: no visible global function definition for
  'getName'
getName.SampleNormalization: no visible global function definition for
  'getName'
getPath.NSANormalization: no visible global function definition for
  'getRootPath'
getPath.NSANormalization: no visible global function definition for
  'getFullName'
getPath.NSANormalization: no visible global function definition for
  'getChipType'
getPath.NSANormalization: no visible global function definition for
  'getPath'
getPath.NSANormalization: no visible global function definition for
  'throw'
getPath.SNPsNormalization: no visible global function definition for
  'getRootPath'
getPath.SNPsNormalization: no visible global function definition for
  'getFullName'
getPath.SNPsNormalization: no visible global function definition for
  'getChipType'
getPath.SNPsNormalization: no visible global function definition for
  'getPath'
getPath.SNPsNormalization: no visible global function definition for
  'throw'
getPath.SampleNormalization: no visible global function definition for
  'getRootPath'
getPath.SampleNormalization: no visible global function definition for
  'getFullName'
getPath.SampleNormalization: no visible global function definition for
  'getChipType'
getPath.SampleNormalization: no visible global function definition for
  'getPath'
getPath.SampleNormalization: no visible global function definition for
  'throw'
getTags.NSANormalization: no visible global function definition for
  'getTags'
getTags.NSANormalization: no visible global function definition for
  'getAsteriskTags'
getTags.SNPsNormalization: no visible global function definition for
  'getTags'
getTags.SNPsNormalization: no visible global function definition for
  'getAsteriskTags'
getTags.SampleNormalization: no visible global function definition for
  'getTags'
getTags.SampleNormalization: no visible global function definition for
  'getAsteriskTags'
nbrOfFiles.NSANormalization: no visible global function definition for
  'nbrOfFiles'
nbrOfFiles.SNPsNormalization: no visible global function definition for
  'nbrOfFiles'
nbrOfFiles.SampleNormalization: no visible global function definition
  for 'nbrOfFiles'
process.NSANormalization: no visible global function definition for
  'getChipType'
process.NSANormalization: no visible binding for global variable
  'AffymetrixCdfFile'
process.NSANormalization: no visible global function definition for
  'getGenomeInformation'
process.NSANormalization: no visible global function definition for
  'throw'
process.NSANormalization: no visible global function definition for
  'getRam'
process.NSANormalization: no visible binding for global variable
  'aromaSettings'
process.NSANormalization: no visible global function definition for
  'getNames'
process.NSANormalization: no visible global function definition for
  'getPath'
process.NSANormalization: no visible global function definition for
  'getFile'
process.NSANormalization: no visible global function definition for
  'getName'
process.NSANormalization: no visible global function definition for
  'getUnitsOnChromosome'
process.NSANormalization: no visible global function definition for
  'getPositions'
process.SNPsNormalization: no visible global function definition for
  'throw'
process.SNPsNormalization: no visible global function definition for
  'getNames'
process.SNPsNormalization: no visible global function definition for
  'getFile'
process.SNPsNormalization: no visible global function definition for
  'findUnitsTodo'
process.SNPsNormalization: no visible global function definition for
  'getRam'
process.SNPsNormalization: no visible binding for global variable
  'aromaSettings'
process.SNPsNormalization: no visible global function definition for
  'getChipType'
process.SNPsNormalization: no visible global function definition for
  'getPath'
process.SNPsNormalization: no visible global function definition for
  'extractMatrix'
process.SNPsNormalization: no visible global function definition for
  'getName'
process.SNPsNormalization: no visible global function definition for
  'getFullNames'
process.SampleNormalization: no visible global function definition for
  'getChipType'
process.SampleNormalization: no visible binding for global variable
  'AffymetrixCdfFile'
process.SampleNormalization: no visible global function definition for
  'getGenomeInformation'
process.SampleNormalization: no visible global function definition for
  'throw'
process.SampleNormalization: no visible global function definition for
  'getNames'
process.SampleNormalization: no visible global function definition for
  'getRam'
process.SampleNormalization: no visible binding for global variable
  'aromaSettings'
process.SampleNormalization: no visible global function definition for
  'getPath'
process.SampleNormalization: no visible global function definition for
  'getFile'
process.SampleNormalization: no visible global function definition for
  'getName'
sampleNByTotalAndFracB.numeric: no visible global function definition
  for 'throw'
setTags.NSANormalization: no visible global function definition for
  'trim'
setTags.SNPsNormalization: no visible global function definition for
  'trim'
setTags.SampleNormalization: no visible global function definition for
  'trim'
snpsNByTotalAndFracB.matrix: no visible global function definition for
  'throw'
snpsNByTotalAndFracB.matrix: no visible global function definition for
  'rowAlls'