Rd file 'adonis.pertables.Rd':
  \examples lines wider than 100 characters:
     # Define a new index that includes the terms used in the \code{Amazonia} dataset to define undetermined taxa at different taxonomic lev ... [TRUNCATED]
     #Generate a pertables object (i.e. a list of biological data tables simulated from taxonomic uncertainty)
     # Assess the effects of taxonomic uncertainty on a Mantel test of biological dissimilarity  correlated to soil dissimilarity among site ... [TRUNCATED]

Rd file 'cca.pertables.Rd':
  \examples lines wider than 100 characters:
     # Define a new index that includes the terms used in the \code{Amazonia} dataset to define undetermined 
     #Generate a pertables object (i.e. a list of biological data tables simulated from taxonomic uncertainty)
     # Assess the effects of taxonomic uncertainty on a CCA analysis of biological data explained by all the 

Rd file 'mantel.pertables.Rd':
  \usage lines wider than 90 characters:
     mantel.pertables(pertab, env, dist.method = "bray", binary = FALSE, cor.method = "pearson", permutations = 100)
      plot(x, xlab = "Environmental distance", ylab = "Sorensen's similarity index", pch = 19, ...)
  \examples lines wider than 100 characters:
     # Define a new index that includes the terms used in the \code{Amazonia} dataset to define undetermined taxa at different taxonomic lev ... [TRUNCATED]
     #Generate a pertables object (i.e. a list of biological data tables simulated from taxonomic uncertainty)
     # Assess the effects of taxonomic uncertainty on a Mantel test of biological dissimilarity  correlated to soil dissimilarity among site ... [TRUNCATED]

Rd file 'pertables.Rd':
  \examples lines wider than 100 characters:
     # Define a new index that includes the terms used in the \code{Amazonia} dataset to define undetermined taxa at different taxonomic lev ... [TRUNCATED]
     #Generate a pertables object (i.e. a list of biological data tables simulated from taxonomic uncertainty)

Rd file 'rda.pertables.Rd':
  \examples lines wider than 100 characters:
     # Define a new index that includes the terms used in the \code{Amazonia} dataset to define undetermined taxa at different taxonomic lev ... [TRUNCATED]
     #Generate a pertables object (i.e. a list of biological data tables simulated from taxonomic uncertainty)
     # Assess the effects of taxonomic uncertainty on a RDA analysis of biological data explained by all the environmental variables of the  ... [TRUNCATED]

These lines will be truncated in the PDF manual.