Error in re-building vignettes:
  ...
Loading required package: HSAUR3
Loading required package: tools
Loading required package: Matrix
Loading required package: mvtnorm
Loading required package: survival
Loading required package: TH.data
Loading required package: MASS

Attaching package: 'TH.data'

The following object is masked from 'package:MASS':

    geyser

The following object is masked from 'package:HSAUR3':

    birds

Loading required package: HSAUR3
Loading required package: tools
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Loading required package: Matrix
Warning in checkConv(attr(opt, "derivs"), opt$par, ctrl = control$checkConv,  :
  Model failed to converge with max|grad| = 0.197379 (tol = 0.001, component 1)
Loading required package: HSAUR3
Loading required package: tools
Loading required package: NLP
Loading required package: RColorBrewer
Loading required package: HSAUR3
Loading required package: tools
Loading required package: survival
Waiting for profiling to be done...
Waiting for profiling to be done...

 *** caught segfault ***
address fe08, cause 'memory not mapped'

Traceback:
 1: glm.fit(x = Xi, y = Y, weights = W, etastart = LP, offset = o,     family = fam, control = fitted$control)
 2: profile.glm(object, which = parm, alpha = (1 - level)/4, trace = trace)
 3: profile(object, which = parm, alpha = (1 - level)/4, trace = trace)
 4: confint.glm(model)
 5: confint(model)
 6: cbind(`Odds (Ratio)` = exp(coef(model)), exp(confint(model)))
 7: eci(glm(Smoking_Mueller1940 ~ smoking, family = binomial()))
 8: eval(expr, envir, enclos)
 9: eval(expr, .GlobalEnv)
10: withVisible(eval(expr, .GlobalEnv))
11: doTryCatch(return(expr), name, parentenv, handler)
12: tryCatchOne(expr, names, parentenv, handlers[[1L]])
13: tryCatchList(expr, classes, parentenv, handlers)
14: tryCatch(expr, error = function(e) {    call <- conditionCall(e)    if (!is.null(call)) {        if (identical(call[[1L]], quote(doTryCatch)))             call <- sys.call(-4L)        dcall <- deparse(call)[1L]        prefix <- paste("Error in", dcall, ": ")        LONG <- 75L        msg <- conditionMessage(e)        sm <- strsplit(msg, "\n")[[1L]]        w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")        if (is.na(w))             w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],                 type = "b")        if (w > LONG)             prefix <- paste0(prefix, "\n  ")    }    else prefix <- "Error : "    msg <- paste0(prefix, conditionMessage(e), "\n")    .Internal(seterrmessage(msg[1L]))    if (!silent && identical(getOption("show.error.messages"),         TRUE)) {        cat(msg, file = stderr())        .Internal(printDeferredWarnings())    }    invisible(structure(msg, class = "try-error", condition = e))})
15: try(withVisible(eval(expr, .GlobalEnv)), silent = TRUE)
16: evalFunc(ce, options)
17: tryCatchList(expr, classes, parentenv, handlers)
18: tryCatch(evalFunc(ce, options), finally = {    cat("\n")    sink()})
19: driver$runcode(drobj, chunk, chunkopts)
20: utils::Sweave(...)
21: engine$weave(file, quiet = quiet, encoding = enc)
22: doTryCatch(return(expr), name, parentenv, handler)
23: tryCatchOne(expr, names, parentenv, handlers[[1L]])
24: tryCatchList(expr, classes, parentenv, handlers)
25: tryCatch({    engine$weave(file, quiet = quiet, encoding = enc)    setwd(startdir)    find_vignette_product(name, by = "weave", engine = engine)}, error = function(e) {    stop(gettextf("processing vignette '%s' failed with diagnostics:\n%s",         file, conditionMessage(e)), domain = NA, call. = FALSE)})
26: buildVignettes(dir = "/home/ripley/R/packages/tests32/HSAUR3.Rcheck/vign_test/HSAUR3")
An irrecoverable exception occurred. R is aborting now ...