calcMSCritDMC: warning in ls(all = TRUE): partial argument match of
  ‘all’ to ‘all.names’
calcMSCritDMCExt: warning in ls(all = TRUE): partial argument match of
  ‘all’ to ‘all.names’
calcMSCritMCC: warning in ls(all = TRUE): partial argument match of
  ‘all’ to ‘all.names’
calcMSCritMCCExt: warning in ls(all = TRUE): partial argument match of
  ‘all’ to ‘all.names’
MNLAuxMix: no visible global function definition for ‘runif’
MNLAuxMix: no visible global function definition for ‘mvrnorm’
MNLAuxMix: no visible global function definition for ‘flush.console’
calcAllocationsDMC: no visible global function definition for
  ‘flush.console’
calcAllocationsDMC: no visible global function definition for ‘dev.new’
calcAllocationsDMC: no visible global function definition for ‘par’
calcAllocationsDMC: no visible global function definition for ‘matplot’
calcAllocationsDMC: no visible global function definition for ‘axis’
calcAllocationsDMCExt: no visible global function definition for
  ‘flush.console’
calcAllocationsMCC: no visible global function definition for
  ‘flush.console’
calcAllocationsMCC: no visible global function definition for ‘dev.new’
calcAllocationsMCC: no visible global function definition for ‘par’
calcAllocationsMCC: no visible global function definition for ‘matplot’
calcAllocationsMCC: no visible global function definition for ‘axis’
calcAllocationsMCCExt: no visible global function definition for
  ‘flush.console’
calcAllocationsMNL: no visible global function definition for
  ‘flush.console’
calcEntropy: no visible global function definition for ‘xtable’
calcEquiDist: no visible global function definition for ‘xtable’
calcEquiDist: no visible global function definition for ‘dev.new’
calcEquiDist: no visible global function definition for ‘par’
calcEquiDist: no visible global function definition for ‘barplot2’
calcEquiDist: no visible global function definition for ‘rainbow’
calcLongRunDist: no visible global function definition for ‘dev.new’
calcLongRunDist: no visible global function definition for ‘par’
calcLongRunDist: no visible global function definition for ‘barplot2’
calcLongRunDist: no visible global function definition for ‘rainbow’
calcLongRunDist: no visible global function definition for ‘xtable’
calcMSCritDMC: no visible global function definition for
  ‘flush.console’
calcMSCritDMC: no visible global function definition for ‘postscript’
calcMSCritDMC: no visible global function definition for ‘par’
calcMSCritDMC: no visible global function definition for ‘plot’
calcMSCritDMC: no visible global function definition for ‘mtext’
calcMSCritDMC: no visible global function definition for ‘dev.off’
calcMSCritDMC: no visible global function definition for ‘pdf’
calcMSCritDMCExt: no visible global function definition for
  ‘flush.console’
calcMSCritDMCExt: no visible global function definition for
  ‘postscript’
calcMSCritDMCExt: no visible global function definition for ‘par’
calcMSCritDMCExt: no visible global function definition for ‘plot’
calcMSCritDMCExt: no visible global function definition for ‘mtext’
calcMSCritDMCExt: no visible global function definition for ‘dev.off’
calcMSCritDMCExt: no visible global function definition for ‘pdf’
calcMSCritMCC: no visible global function definition for
  ‘flush.console’
calcMSCritMCC: no visible global function definition for ‘postscript’
calcMSCritMCC: no visible global function definition for ‘par’
calcMSCritMCC: no visible global function definition for ‘plot’
calcMSCritMCC: no visible global function definition for ‘mtext’
calcMSCritMCC: no visible global function definition for ‘dev.off’
calcMSCritMCC: no visible global function definition for ‘pdf’
calcMSCritMCCExt: no visible global function definition for ‘cov’
calcMSCritMCCExt: no visible global function definition for ‘rmnorm’
calcMSCritMCCExt: no visible global function definition for ‘dmnorm’
calcMSCritMCCExt: no visible global function definition for
  ‘flush.console’
calcMSCritMCCExt: no visible global function definition for
  ‘postscript’
calcMSCritMCCExt: no visible global function definition for ‘par’
calcMSCritMCCExt: no visible global function definition for ‘plot’
calcMSCritMCCExt: no visible global function definition for ‘mtext’
calcMSCritMCCExt: no visible global function definition for ‘dev.off’
calcMSCritMCCExt: no visible global function definition for ‘pdf’
calcNumEff : <anonymous>: no visible global function definition for
  ‘numEff’
calcNumEff: no visible global function definition for ‘xtable’
calcParMatDMC: no visible global function definition for ‘xtable’
calcRegCoeffs: no visible binding for global variable ‘sd’
calcRegCoeffs: no visible binding for global variable ‘boa.hpd’
calcRegCoeffs: no visible global function definition for ‘xtable’
calcRegCoeffs: no visible global function definition for ‘dev.new’
calcRegCoeffs: no visible global function definition for ‘par’
calcRegCoeffs: no visible global function definition for ‘matplot’
calcRegCoeffs: no visible global function definition for ‘acf’
calcRegCoeffs: no visible global function definition for ‘mtext’
calcSegmentationPower: no visible global function definition for
  ‘xtable’
calcTransProbs: no visible binding for global variable ‘sd’
calcTransProbs: no visible global function definition for ‘xtable’
calcTransProbs: no visible global function definition for ‘dev.new’
calcTransProbs: no visible global function definition for ‘par’
calcTransProbs: no visible global function definition for ‘plot’
calcTransProbs: no visible global function definition for ‘axis’
calcTransProbs: no visible global function definition for ‘lines’
calcVariationDMC: no visible global function definition for ‘xtable’
calcVariationDMC: no visible binding for global variable ‘sd’
dmClust : ehjUpdate_k: no visible global function definition for
  ‘rbinom’
dmClust : priorDens: no visible global function definition for
  ‘dnbinom’
dmClust : monitor_e_h: no visible global function definition for ‘plot’
dmClust : monitor_e_h: no visible global function definition for
  ‘lines’
dmClust : monitor_xi_h: no visible global function definition for
  ‘plot’
dmClust : monitor_xi_h: no visible global function definition for
  ‘lines’
dmClust: no visible global function definition for ‘flush.console’
dmClust: no visible global function definition for ‘rmultinom’
dmClust: no visible global function definition for ‘dev.new’
dmClust: no visible global function definition for ‘par’
dmClust: no visible global function definition for ‘dev.cur’
dmClust: no visible global function definition for ‘ddirichlet’
dmClust: no visible global function definition for ‘dev.set’
dmClustExtended : ehjUpdate_k: no visible global function definition
  for ‘rbinom’
dmClustExtended : priorDens: no visible global function definition for
  ‘dnbinom’
dmClustExtended : monitor_e_h: no visible global function definition
  for ‘plot’
dmClustExtended : monitor_e_h: no visible global function definition
  for ‘lines’
dmClustExtended : monitor_xi_h: no visible global function definition
  for ‘plot’
dmClustExtended : monitor_xi_h: no visible global function definition
  for ‘lines’
dmClustExtended: no visible global function definition for
  ‘flush.console’
dmClustExtended: no visible global function definition for ‘runif’
dmClustExtended: no visible global function definition for ‘mvrnorm’
dmClustExtended: no visible global function definition for ‘rmultinom’
dmClustExtended: no visible global function definition for ‘dev.new’
dmClustExtended: no visible global function definition for ‘par’
dmClustExtended: no visible global function definition for ‘dev.cur’
dmClustExtended: no visible global function definition for ‘dnorm’
dmClustExtended: no visible global function definition for ‘dev.set’
mcClust : dirDensFun: no visible global function definition for
  ‘ddirichlet’
mcClust: no visible global function definition for ‘runif’
mcClust: no visible global function definition for ‘ddirichlet’
mcClust: no visible global function definition for ‘flush.console’
mcClustExtended : dirDensFun: no visible global function definition for
  ‘ddirichlet’
mcClustExtended: no visible global function definition for ‘runif’
mcClustExtended: no visible global function definition for ‘mvrnorm’
mcClustExtended: no visible global function definition for ‘dnorm’
mcClustExtended: no visible global function definition for
  ‘flush.console’
plotLikeliPaths: no visible global function definition for ‘dev.new’
plotLikeliPaths: no visible global function definition for ‘par’
plotLikeliPaths: no visible global function definition for ‘plot’
plotLikeliPaths: no visible global function definition for ‘abline’
plotScatter: no visible global function definition for ‘dev.new’
plotScatter: no visible global function definition for ‘par’
plotScatter: no visible global function definition for ‘plot’
plotScatter: no visible global function definition for ‘points’
plotTransProbs: no visible global function definition for ‘dev.new’
plotTransProbs: no visible global function definition for ‘par’
plotTransProbs : <anonymous>: no visible global function definition for
  ‘balloonplot’
plotTransProbs : <anonymous>: no visible global function definition for
  ‘strwidth’
plotTransProbs : <anonymous>: no visible global function definition for
  ‘strheight’
plotTransProbs: no visible global function definition for ‘balloonplot’
plotTransProbs: no visible global function definition for ‘strwidth’
plotTransProbs: no visible global function definition for ‘strheight’
plotTransProbs: no visible global function definition for ‘xtable’
plotTypicalMembers: no visible global function definition for ‘dev.new’
plotTypicalMembers: no visible global function definition for ‘par’
plotTypicalMembers: no visible global function definition for ‘plot’
plotTypicalMembers: no visible global function definition for ‘axis’
Undefined global functions or variables:
  abline acf axis balloonplot barplot2 boa.hpd cov ddirichlet dev.cur
  dev.new dev.off dev.set dmnorm dnbinom dnorm flush.console lines
  matplot mtext mvrnorm numEff par pdf plot points postscript rainbow
  rbinom rmnorm rmultinom runif sd strheight strwidth xtable
Consider adding
  importFrom("grDevices", "dev.cur", "dev.new", "dev.off", "dev.set",
             "pdf", "postscript", "rainbow")
  importFrom("graphics", "abline", "axis", "lines", "matplot", "mtext",
             "par", "plot", "points", "strheight", "strwidth")
  importFrom("stats", "acf", "cov", "dnbinom", "dnorm", "rbinom",
             "rmultinom", "runif", "sd")
  importFrom("utils", "flush.console")
to your NAMESPACE file.