Error in re-building vignettes:
  ...
Loading required package: tcltk
Loading required package: tkrplot
Loading required package: waveslim

waveslim: Wavelet Method for 1/2/3D Signals (version = 1.7.5)

Loading required package: nonlinearTseries
Loading required package: Matrix
Loading required package: rgl
Loading required package: tseries
Loading required package: TSA
Loading required package: leaps
Loading required package: locfit
locfit 1.5-9.1 	 2013-03-22
Loading required package: mgcv
Loading required package: nlme
This is mgcv 1.8-16. For overview type 'help("mgcv-package")'.

Attaching package: ‘TSA’

The following objects are masked from ‘package:stats’:

    acf, arima

The following object is masked from ‘package:utils’:

    tar

Loading required package: Rcpp

Attaching package: ‘nonlinearTseries’

The following object is masked from ‘package:grDevices’:

    contourLines

Loading required package: lomb
 Loading beats positions for record: example.beats 
 Path: beatsFolder 
 Scale: 1 
 Date:  01 / 01 / 1900 
  Time:  00 : 00 : 00 
 Number of beats: 17360 
 Calculating non-interpolated heart rate 
 Number of beats: 17360 
 Filtering non-interpolated Heart Rate 
 Number of original beats: 17360 
 Number of accepted beats: 17249 
 Interpolating instantaneous heart rate 
 Frequency: 4 Hz 
 Number of beats: 17249 
 Number of points: 29592 
 Plotting non-interpolated instantaneous heart rate 
 Number of points: 17249 
 Plotting non-interpolated instantaneous heart rate 
 Number of points: 17249 
 Plotting interpolated instantaneous heart rate 
 Number of points: 29592 
 Plotting interpolated instantaneous heart rate 
 Number of points: 29592 
 Creating time analysis 
 Size of window: 300 seconds 
 Width of bins in histogram: 7.8125 milliseconds 
 Number of windows: 24 
 Data has now 1 time analyses
   SDNN: 39.7538 msec.
   SDANN: 31.1092 msec.
   SDNNIDX: 24.9669 msec.
   pNN50: 9.317 %
   SDSD: 30.8877 msec.
   r-MSSD: 30.8868 msec.
   IRRR: 56 msec.
   MADRR: 16 msec.
   TINN: 172.1045 msec.
   HRV index: 11.0147 
 Creating time analysis 
 Size of window: 300 seconds 
 Width of bins in histogram: 7.8125 milliseconds 
 Number of windows: 24 
 Data has now 1 time analyses
   SDNN: 39.7538 msec.
   SDANN: 31.1092 msec.
   SDNNIDX: 24.9669 msec.
   pNN50: 9.317 %
   SDSD: 30.8877 msec.
   r-MSSD: 30.8868 msec.
   IRRR: 56 msec.
   MADRR: 16 msec.
   TINN: 172.1045 msec.
   HRV index: 11.0147 
 Creating frequency analysis 
 Data has now 1 frequency analysis 
 Calculating power per band 
 Using Fourier analysis 
 Windowing signal... 237 windows 
 Power per band calculated 
 Calculating power per band 
 Using Wavelet analysis 
 Power per band calculated 
 Calculating power per band 
 Using Fourier analysis 
 Windowing signal... 237 windows 
 Power per band calculated 
 Creating frequency analysis 
 Data has now 2 frequency analysis 
 Calculating power per band 
 Using Wavelet analysis 
 Power per band calculated 
 Plotting power per band 
 Plotted LF/HF 
 Plotted ULF 
 Plotted VLF 
 Plotted LF 
 Plotted HF 
 Power per band plotted 
 Plotting power per band 
 Plotted LF/HF 
 Plotted ULF 
 Plotted VLF 
 Plotted LF 
 Plotted HF 
 Power per band plotted 
 Plotting power per band 
 Plotted LF/HF 
 Plotted ULF 
 Plotted VLF 
 Plotted LF 
 Plotted HF 
 Power per band plotted 
 Plotting power per band 
 Plotted LF/HF 
 Plotted ULF 
 Plotted VLF 
 Plotted LF 
 Plotted HF 
 Power per band plotted 
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RHRV.Rcheck/vign_test/RHRV/vignettes'
rm -f index.html
rm -f *.tex *.bbl *.blg *.aux *.out *.log *.spl
# Generate the concordance.tex
/data/gannet/ripley/R/R-clang/bin/R CMD Sweave --clean --pdf RHRV-quickstart.Rnw
Loading required package: tcltk
Loading required package: tkrplot
Loading required package: waveslim

waveslim: Wavelet Method for 1/2/3D Signals (version = 1.7.5)

Loading required package: nonlinearTseries
Loading required package: Matrix
Loading required package: rgl
Loading required package: tseries
Loading required package: TSA
Loading required package: leaps
Loading required package: locfit
locfit 1.5-9.1 	 2013-03-22
Loading required package: mgcv
Loading required package: nlme
This is mgcv 1.8-16. For overview type 'help("mgcv-package")'.

Attaching package: ‘TSA’

The following objects are masked from ‘package:stats’:

    acf, arima

The following object is masked from ‘package:utils’:

    tar

Loading required package: Rcpp

Attaching package: ‘nonlinearTseries’

The following object is masked from ‘package:grDevices’:

    contourLines

Loading required package: lomb
 Loading beats positions for record: example.beats 
 Path: beatsFolder 
 Scale: 1 
 Date:  01 / 01 / 1900 
  Time:  00 : 00 : 00 
 Number of beats: 17360 
 Calculating non-interpolated heart rate 
 Number of beats: 17360 
 Filtering non-interpolated Heart Rate 
 Number of original beats: 17360 
 Number of accepted beats: 17249 
 Interpolating instantaneous heart rate 
 Frequency: 4 Hz 
 Number of beats: 17249 
 Number of points: 29592 
 Plotting non-interpolated instantaneous heart rate 
 Number of points: 17249 
 Plotting non-interpolated instantaneous heart rate 
 Number of points: 17249 
 Plotting interpolated instantaneous heart rate 
 Number of points: 29592 
 Plotting interpolated instantaneous heart rate 
 Number of points: 29592 
 Creating time analysis 
 Size of window: 300 seconds 
 Width of bins in histogram: 7.8125 milliseconds 
 Number of windows: 24 
 Data has now 1 time analyses
   SDNN: 39.7538 msec.
   SDANN: 31.1092 msec.
   SDNNIDX: 24.9669 msec.
   pNN50: 9.317 %
   SDSD: 30.8877 msec.
   r-MSSD: 30.8868 msec.
   IRRR: 56 msec.
   MADRR: 16 msec.
   TINN: 172.1045 msec.
   HRV index: 11.0147 
 Creating time analysis 
 Size of window: 300 seconds 
 Width of bins in histogram: 7.8125 milliseconds 
 Number of windows: 24 
 Data has now 1 time analyses
   SDNN: 39.7538 msec.
   SDANN: 31.1092 msec.
   SDNNIDX: 24.9669 msec.
   pNN50: 9.317 %
   SDSD: 30.8877 msec.
   r-MSSD: 30.8868 msec.
   IRRR: 56 msec.
   MADRR: 16 msec.
   TINN: 172.1045 msec.
   HRV index: 11.0147 
 Creating frequency analysis 
 Data has now 1 frequency analysis 
 Calculating power per band 
 Using Fourier analysis 
 Windowing signal... 237 windows 
 Power per band calculated 
 Calculating power per band 
 Using Wavelet analysis 
 Power per band calculated 
 Calculating power per band 
 Using Fourier analysis 
 Windowing signal... 237 windows 
 Power per band calculated 
 Creating frequency analysis 
 Data has now 2 frequency analysis 
 Calculating power per band 
 Using Wavelet analysis 
 Power per band calculated 
 Plotting power per band 
 Plotted LF/HF 
 Plotted ULF 
 Plotted VLF 
 Plotted LF 
 Plotted HF 
 Power per band plotted 
 Plotting power per band 
 Plotted LF/HF 
 Plotted ULF 
 Plotted VLF 
 Plotted LF 
 Plotted HF 
 Power per band plotted 
 Plotting power per band 
 Plotted LF/HF 
 Plotted ULF 
 Plotted VLF 
 Plotted LF 
 Plotted HF 
 Power per band plotted 
 Plotting power per band 
 Plotted LF/HF 
 Plotted ULF 
 Plotted VLF 
 Plotted LF 
 Plotted HF 
 Power per band plotted 
Output file:  RHRV-quickstart.pdf
Makefile:11: recipe for target 'RHRV-quickstart.pdf' failed
make[2]: *** [RHRV-quickstart.pdf] Error 1
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RHRV.Rcheck/vign_test/RHRV/vignettes'
Error in buildVignettes(dir = "/data/gannet/ripley/R/packages/tests-clang/RHRV.Rcheck/vign_test/RHRV") : 
  running 'make' failed
Execution halted