* installing *source* package 'stpphawkes' ...
** this is package 'stpphawkes' version '0.2.2'
** package 'stpphawkes' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.2.0'
make[1]: Entering directory '/d/temp/2025_10_26_01_50_00_14777/RtmpaA7JT3/R.INSTALL79040dc44/stpphawkes/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from RcppExports.cpp:4:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c areapl.cpp -o areapl.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from areapl.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c condInt_mcmc_stpp.cpp -o condInt_mcmc_stpp.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from condInt_mcmc_stpp.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c condInt_mcmc_stpp_branching.cpp -o condInt_mcmc_stpp_branching.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from condInt_mcmc_stpp_branching.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c condInt_mcmc_stpp_branching_md.cpp -o condInt_mcmc_stpp_branching_md.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from condInt_mcmc_stpp_branching_md.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c condInt_mcmc_stpp_branching_nonunif.cpp -o condInt_mcmc_stpp_branching_nonunif.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from condInt_mcmc_stpp_branching_nonunif.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c condInt_mcmc_stpp_branching_nonunif_md.cpp -o condInt_mcmc_stpp_branching_nonunif_md.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from condInt_mcmc_stpp_branching_nonunif_md.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
condInt_mcmc_stpp_branching_nonunif_md.cpp: In function 'Rcpp::List condInt_mcmc_stpp_branching_nonunif_md(Rcpp::DataFrame, arma::mat, double, std::vector<int, std::allocator<int> >, double, double, double, double, double, double, double, double, arma::mat, std::vector<double>, std::vector<double>, std::vector<double>, std::vector<double>, double, double, std::vector<double>, std::vector<double>, std::vector<double>, std::vector<double>, int, int, bool, bool)':
condInt_mcmc_stpp_branching_nonunif_md.cpp:354:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
354 | for (int i = 0; i < z_curr_t_all.size(); ++i) {
| ~~^~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c condInt_mcmc_temporal.cpp -o condInt_mcmc_temporal.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from condInt_mcmc_temporal.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c condInt_mcmc_temporal_branching.cpp -o condInt_mcmc_temporal_branching.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from condInt_mcmc_temporal_branching.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c condInt_mcmc_temporal_branching_md.cpp -o condInt_mcmc_temporal_branching_md.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from condInt_mcmc_temporal_branching_md.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c condInt_mcmc_temporal_md.cpp -o condInt_mcmc_temporal_md.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from condInt_mcmc_temporal_md.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c helper_functions.cpp -o helper_functions.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from helper_functions.h:4,
from helper_functions.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c homo_ppp.cpp -o homo_ppp.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from homo_ppp.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c model_likelihood.cpp -o model_likelihood.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from model_likelihood.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c nonunif_ppp.cpp -o nonunif_ppp.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from nonunif_ppp.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c polygon.cpp -o polygon.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from polygon.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ptinpoly.cpp -o ptinpoly.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from ptinpoly.h:1,
from ptinpoly.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c simulate_stpp_hawkes.cpp -o simulate_stpp_hawkes.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from simulate_stpp_hawkes.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c simulate_stpp_hawkes_nonunif.cpp -o simulate_stpp_hawkes_nonunif.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from simulate_stpp_hawkes_nonunif.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c simulate_temporal_hawkes.cpp -o simulate_temporal_hawkes.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from simulate_temporal_hawkes.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c spatio_temporal_common.cpp -o spatio_temporal_common.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from helper_functions.h:4,
from spatio_temporal_common.h:4,
from spatio_temporal_common.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
spatio_temporal_common.cpp: In function 'double stpp::sample_a_accumulate(const std::vector<double>&, double, double)':
spatio_temporal_common.cpp:16:12: warning: unused variable 'epsilon' [-Wunused-variable]
16 | double epsilon = t_max - 36.0 / b_curr;
| ^~~~~~~
spatio_temporal_common.cpp: In function 'std::vector<int, std::allocator<int> > stpp::sample_y(const std::vector<double>&, const std::vector<double>&, const std::vector<double>&, double, double, double, double, arma::mat)':
spatio_temporal_common.cpp:67:12: warning: unused variable 'epsilon' [-Wunused-variable]
67 | double epsilon = 36.0 / b_curr;
| ^~~~~~~
spatio_temporal_common.cpp: In function 'double stpp::b_posterior(const std::vector<double>&, double, double, double, const std::vector<double>&, const std::vector<double>&)':
spatio_temporal_common.cpp:112:12: warning: unused variable 'epsilon' [-Wunused-variable]
112 | double epsilon = t_max - 38 / b;
| ^~~~~~~
spatio_temporal_common.cpp: In function 'double stpp::missing_data::log_lik(std::vector<double>&, std::vector<double>&, std::vector<double>&, double, double, double, double, double, arma::mat)':
spatio_temporal_common.cpp:205:12: warning: unused variable 'epsilon' [-Wunused-variable]
205 | double epsilon = 36.0 / b;
| ^~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c spatio_temporal_common_nonunif.cpp -o spatio_temporal_common_nonunif.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from helper_functions.h:4,
from spatio_temporal_common_nonunif.h:4,
from spatio_temporal_common_nonunif.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
spatio_temporal_common_nonunif.cpp: In function 'double stpp_nonunif::sample_a_accumulate(const std::vector<double>&, double, double)':
spatio_temporal_common_nonunif.cpp:16:10: warning: unused variable 'epsilon' [-Wunused-variable]
16 | double epsilon = t_max - 36.0 / b_curr;
| ^~~~~~~
spatio_temporal_common_nonunif.cpp: In function 'std::vector<int, std::allocator<int> > stpp_nonunif::sample_y(const std::vector<double>&, const std::vector<double>&, const std::vector<double>&, double, double, double, double, double, double, double, double)':
spatio_temporal_common_nonunif.cpp:100:10: warning: unused variable 'epsilon' [-Wunused-variable]
100 | double epsilon = 36.0 / b_curr;
| ^~~~~~~
spatio_temporal_common_nonunif.cpp: In function 'double stpp_nonunif::b_posterior(const std::vector<double>&, double, double, double, const std::vector<double>&, const std::vector<double>&)':
spatio_temporal_common_nonunif.cpp:152:10: warning: unused variable 'epsilon' [-Wunused-variable]
152 | double epsilon = t_max - 38 / b;
| ^~~~~~~
spatio_temporal_common_nonunif.cpp: In function 'double stpp_nonunif::missing_data::log_lik(std::vector<double>&, std::vector<double>&, std::vector<double>&, double, double, double, double, double, double, double, double, double)':
spatio_temporal_common_nonunif.cpp:235:11: warning: unused variable 'epsilon' [-Wunused-variable]
235 | double epsilon = 36.0 / b;
| ^~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c temporal_catmark.cpp -o temporal_catmark.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from helper_functions.h:4,
from temporal_catmark.cpp:3:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c temporal_catmark_common.cpp -o temporal_catmark_common.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from temporal_catmark_common.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c temporal_catmark_md.cpp -o temporal_catmark_md.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from temporal_catmark_md.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c temporal_common.cpp -o temporal_common.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from temporal_common.h:4,
from temporal_common.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c temporal_contmark.cpp -o temporal_contmark.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from helper_functions.h:4,
from temporal_contmark.cpp:3:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c temporal_contmark_common.cpp -o temporal_contmark_common.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from temporal_contmark_common.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
temporal_contmark_common.cpp: In function 'double contmark::sample_wscale(const std::vector<double>&, const std::vector<double>&, double)':
temporal_contmark_common.cpp:16:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
16 | for(int i = 0; i < marks.size(); ++i){
| ~~^~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppProgress/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppGSL/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I/include -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c utilities.cpp -o utilities.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from utilities.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -shared -s -static-libgcc -o stpphawkes.dll tmp.def RcppExports.o areapl.o condInt_mcmc_stpp.o condInt_mcmc_stpp_branching.o condInt_mcmc_stpp_branching_md.o condInt_mcmc_stpp_branching_nonunif.o condInt_mcmc_stpp_branching_nonunif_md.o condInt_mcmc_temporal.o condInt_mcmc_temporal_branching.o condInt_mcmc_temporal_branching_md.o condInt_mcmc_temporal_md.o helper_functions.o homo_ppp.o model_likelihood.o nonunif_ppp.o polygon.o ptinpoly.o simulate_stpp_hawkes.o simulate_stpp_hawkes_nonunif.o simulate_temporal_hawkes.o spatio_temporal_common.o spatio_temporal_common_nonunif.o temporal_catmark.o temporal_catmark_common.o temporal_catmark_md.o temporal_common.o temporal_contmark.o temporal_contmark_common.o utilities.o -L/lib -lgsl -lgslcblas -LD:/RCompile/recent/R-4.5.1/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.5.1/bin/x64 -lRblas -lgfortran -lquadmath -fopenmp -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.1/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2025_10_26_01_50_00_14777/RtmpaA7JT3/R.INSTALL79040dc44/stpphawkes/src'
make[1]: Entering directory '/d/temp/2025_10_26_01_50_00_14777/RtmpaA7JT3/R.INSTALL79040dc44/stpphawkes/src'
make[1]: Leaving directory '/d/temp/2025_10_26_01_50_00_14777/RtmpaA7JT3/R.INSTALL79040dc44/stpphawkes/src'
installing to d:/Rcompile/CRANpkg/lib/4.5/00LOCK-stpphawkes/00new/stpphawkes/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'stpphawkes' as stpphawkes_0.2.2.zip
* DONE (stpphawkes)