- using R version 4.5.1 (2025-06-13 ucrt)
- using platform: x86_64-w64-mingw32
- R was compiled by
gcc.exe (GCC) 14.2.0
GNU Fortran (GCC) 14.2.0
- running under: Windows Server 2022 x64 (build 20348)
- using session charset: UTF-8
- checking for file 'rLakeHabitat/DESCRIPTION' ... OK
- checking extension type ... Package
- this is package 'rLakeHabitat' version '1.0.0'
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking whether package 'rLakeHabitat' can be installed ... OK
See the install log for details.
- checking installed package size ... OK
- checking package directory ... OK
- checking 'build' directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [8s] OK
- checking whether the package can be loaded with stated dependencies ... [7s] OK
- checking whether the package can be unloaded cleanly ... [8s] OK
- checking whether the namespace can be loaded with stated dependencies ... [8s] OK
- checking whether the namespace can be unloaded cleanly ... [8s] OK
- checking loading without being on the library search path ... [8s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [19s] OK
- checking Rd files ... [1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from 'inst/doc' ... OK
- checking files in 'vignettes' ... OK
- checking examples ... [18s] OK
- checking for unstated dependencies in 'tests' ... OK
- checking tests ... [25s] ERROR
Running 'testthat.R' [24s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(rLakeHabitat)
>
> test_check("rLakeHabitat")
[inverse distance weighted interpolation]
[inverse distance weighted interpolation]
[inverse distance weighted interpolation]
[inverse distance weighted interpolation]
[inverse distance weighted interpolation]
[inverse distance weighted interpolation]
[inverse distance weighted interpolation]
[inverse distance weighted interpolation]
[using ordinary kriging]
[using ordinary kriging]
[using ordinary kriging]
[using ordinary kriging]
[ FAIL 1 | WARN 3 | SKIP 0 | PASS 212 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-crossValidate.R:52:3'): crossValidate output check ─────────────
Error in `interpBathy(outline, trainDat, x = x, y = y, z = z, zeros = zeros,
separation = separation, crsUnits = crsUnits, res = res,
fact = fact, method = method, nmax = nmax, idp = idp, model = model,
psill = psill, range = range, nugget = nugget, kappa = kappa)`: nmax cannot exceed number of observations in df
Backtrace:
▆
1. ├─testthat::expect_equal(...) at test-crossValidate.R:52:3
2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─rLakeHabitat::crossValidate(...)
5. └─rLakeHabitat::interpBathy(...)
[ FAIL 1 | WARN 3 | SKIP 0 | PASS 212 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [2s] OK
- checking PDF version of manual ... [28s] OK
- checking HTML version of manual ... [3s] OK
- DONE
Status: 1 ERROR