* installing *source* package 'r2sbml' ...
** this is package 'r2sbml' version '0.1.0'
** package 'r2sbml' successfully unpacked and MD5 sums checked
** using staged installation
set CMAKE_BIN=/x86_64-w64-mingw32.static.posix/bin/cmake
Extracting bundled libsbml-5.21.0 source...
set CC=gcc
set CC_LAUNCHER=
set CFLAGS= -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign
set CXX_LAUNCHER=
set CXX=g++
set CXXFLAGS=-std=gnu++20 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign
set LDFLAGS=
-- Building for: Unix Makefiles
-- The C compiler identification is GNU 14.3.0
-- The CXX compiler identification is GNU 14.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: D:/rtools45/x86_64-w64-mingw32.static.posix/bin/gcc.exe - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: D:/rtools45/x86_64-w64-mingw32.static.posix/bin/g++.exe - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Check for working C compiler: D:/rtools45/x86_64-w64-mingw32.static.posix/bin/gcc.exe - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Could NOT find SWIG (missing: SWIG_EXECUTABLE SWIG_DIR)
-- Looking for gzopen in D:/rtools45/x86_64-w64-mingw32.static.posix/lib/libz.a
-- Looking for gzopen in D:/rtools45/x86_64-w64-mingw32.static.posix/lib/libz.a - found
-- Looking for sin in m
-- Looking for sin in m - found
-- Performing Test LIBXML_LIBXML_TEST
-- Performing Test LIBXML_LIBXML_TEST - Failed
-- LIBXML_LIBXML_TEST =
-- LIBXML_LIBXML_TEST2 = TRUE
-- Found LIBXML: D:/rtools45/x86_64-w64-mingw32.static.posix/lib/libxml2.a (found version "2.12.10")
-- Looking for BZ2_bzCompressInit in D:/rtools45/x86_64-w64-mingw32.static.posix/lib/libbz2.a
-- Looking for BZ2_bzCompressInit in D:/rtools45/x86_64-w64-mingw32.static.posix/lib/libbz2.a - found
-- Found BZ2: D:/rtools45/x86_64-w64-mingw32.static.posix/lib/libbz2.a (found version "1.0.8")
-- Found ZLIB: D:/rtools45/x86_64-w64-mingw32.static.posix/lib/libz.a
-- Looking for include file check.h
-- Looking for include file check.h - not found
-- Looking for include file expat.h
-- Looking for include file expat.h - found
-- Looking for include file errno.h
-- Looking for include file errno.h - found
-- Looking for include file ieeefp.h
-- Looking for include file ieeefp.h - found
-- Looking for include file math.h
-- Looking for include file math.h - found
-- Looking for include file sys/types.h
-- Looking for include file sys/types.h - found
-- Looking for include file float.h
-- Looking for include file float.h - found
-- Looking for sqrt in m
-- Looking for sqrt in m - found
--
----------------------------------------------------------------------
libSBML version 5.21.0
----------------------------------------------------------------------
More information and the latest version are available online at
https://sbml.org/software/libsbml/
Please report problems using the issue tracker at
https://github.com/sbmlteam/libsbml/issues
To contact the developers directly, email libsbml-team@googlegroups.com
Configured on host 'CRANWIN3'
host type = Windows
host operating system = Windows 6.2.9200
host CPU architecture = AMD64
General build flags:
CC = D:/rtools45/x86_64-w64-mingw32.static.posix/bin/gcc.exe
CXX = D:/rtools45/x86_64-w64-mingw32.static.posix/bin/g++.exe
CPPFLAGS = -DWIN32 -DLIBSBML_EXPORTS -DLIBLAX_EXPORTS
CFLAGS = -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x -mfpmath=sse -msse2 -mstackrealign -Wno-format-truncation -Wno-format-overflow -Wno-stringop-overflow -Wno-old-style-definition -Wno-strict-prototypes -std=gnu17
CXXFLAGS = -std=gnu++20 -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -Wno-format-truncation -Wno-format-overflow -Wno-stringop-overflow -Wno-overloaded-virtual -Wno-reorder -Wno-parentheses -Wno-switch -Wno-array-bounds
LDFLAGS =
XML parser library configuration:
XML library = libxml2
CPPFLAGS for XML = -ID:/rtools45/x86_64-w64-mingw32.static.posix/include/libxml2
LIBS for XML = D:/rtools45/x86_64-w64-mingw32.static.posix/lib/libxml2.a
Other libSBML configuration settings:
Installation $prefix = D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install
-- Using SWIG = SWIG_EXECUTABLE-NOTFOUND (Version )
-- Using C++ namespace ('libsbml') = no
--
-- Build examples = no
--
--
-- Support for SBML Level 3 Packages:
-- SBML 'arrays' package = OFF
-- SBML 'comp' package = OFF
-- SBML 'distrib' package = OFF
-- SBML 'dyn' package = OFF
-- SBML 'fbc' package = OFF
-- SBML 'groups' package = OFF
-- SBML 'l3v2extendedmath' package = ON
-- SBML 'layout' package = OFF
-- SBML 'multi' package = OFF
-- SBML 'qual' package = OFF
-- SBML 'render' package = OFF
-- SBML 'req' package = OFF
-- SBML 'spatial' package = OFF
--
-- Other potentially important settings:
-- Compression support is enabled for .zip and .gz files
-- Compression support is enabled for .bz2 files
--
----------------------------------------------------------------------
-- Configuring done (23.6s)
-- Generating done (0.4s)
CMake Warning:
Manually-specified variables were not used by the project:
BUILD_TESTING
-- Build files have been written to: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-build
gmake.exe[1]: Entering directory 'D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-build'
make[2]: Entering directory '/d/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-build'
make[2]: invalid --jobserver-auth string 'gmake_semaphore_554240'
make[3]: Entering directory '/d/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-build'
make[3]: Leaving directory '/d/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-build'
make[3]: Entering directory '/d/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-build'
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[ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/extension/L3v2extendedmathSBMLDocumentPlugin.cpp.obj
[ 1%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathMathMLConsistencyValidator.cpp.obj
[ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathUnitConsistencyValidator.cpp.obj
[ 2%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/L3v2extendedmathValidator.cpp.obj
[ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMArgumentsUnitsCheck.cpp.obj
[ 3%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2EMNumberArgsMathCheck.cpp.obj
[ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathMathMLConsistencyConstraints.cpp.obj
[ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/packages/l3v2extendedmath/validator/constraints/L3v2extendedmathUnitConsistencyConstraints.cpp.obj
[ 4%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/CVTerm.cpp.obj
[ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/Date.cpp.obj
[ 5%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelCreator.cpp.obj
[ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/ModelHistory.cpp.obj
[ 6%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/annotation/RDFAnnotationParser.cpp.obj
[ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/libsbml-version.cpp.obj
[ 7%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/common/operationReturnValues.cpp.obj
[ 8%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/ConversionOption.cpp.obj
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[ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/RegisterConverters.cpp.obj
[ 9%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverter.cpp.obj
[ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLConverterRegistry.cpp.obj
[ 10%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLFunctionDefinitionConverter.cpp.obj
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[ 11%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInferUnitsConverter.cpp.obj
[ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLInitialAssignmentConverter.cpp.obj
[ 12%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLevel1Version1Converter.cpp.obj
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[ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLLocalParameterConverter.cpp.obj
[ 13%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateOfConverter.cpp.obj
[ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRateRuleConverter.cpp.obj
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/conversion/SBMLRateRuleConverter.cpp: In function 'void print_vectors(setCoeff)':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/conversion/SBMLRateRuleConverter.cpp:64:18: warning: unused variable 'term' [-Wunused-variable]
64 | ASTNode* term = co.at(n).first;
| ^~~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/conversion/SBMLRateRuleConverter.cpp: At global scope:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/conversion/SBMLRateRuleConverter.cpp:59:13: warning: 'void print_vectors(setCoeff)' defined but not used [-Wunused-function]
59 | static void print_vectors(setCoeff co)
| ^~~~~~~~~~~~~
[ 14%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLReactionConverter.cpp.obj
[ 15%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/conversion/SBMLRuleConverter.cpp.obj
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[ 28%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Parameter.cpp.obj
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D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/SBase.cpp: In member function 'virtual int SBase::setAnnotation(const XMLNode*)':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/SBase.cpp:1398:8: warning: variable 'hasNestedTerms' set but not used [-Wunused-but-set-variable]
1398 | bool hasNestedTerms = false;
| ^~~~~~~~~~~~~~
[ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SimpleSpeciesReference.cpp.obj
[ 36%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Species.cpp.obj
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[ 38%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/SyntaxChecker.cpp.obj
[ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Trigger.cpp.obj
[ 39%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/Unit.cpp.obj
[ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/UnitDefinition.cpp.obj
[ 40%] Building C object src/CMakeFiles/sbml-static.dir/sbml/UnitKind.c.obj
[ 40%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/html2md/html2md.cpp.obj
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/html2md/html2md.cpp: In member function 'html2md::Converter* html2md::Converter::appendToMd(const char*)':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/html2md/html2md.cpp:230:22: warning: comparison of integer expressions of different signedness: 'int' and 'long long unsigned int' [-Wsign-compare]
230 | for (auto i = 0; i < str_len; ++i) {
| ~~^~~~~~~~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/html2md/html2md.cpp: In member function 'bool html2md::Converter::ParseCharInTagContent(char)':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/html2md/html2md.cpp:582:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
582 | if (chars_in_curr_line_ > option.softBreak && !is_in_table_ && !is_in_list_ &&
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/html2md/html2md.cpp:588:36: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
588 | } else if (chars_in_curr_line_ > option.hardBreak) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/html2md/html2md.cpp: At global scope:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/html2md/html2md.cpp:50:8: warning: 'size_t {anonymous}::ReplaceAll(std::string*, const std::string&, char)' defined but not used [-Wunused-function]
50 | size_t ReplaceAll(string *haystack, const string &needle, const char c) {
| ^~~~~~~~~~
[ 41%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/html2md/table.cpp.obj
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D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/ASTNode.cpp: In member function 'void ASTNode::fillListOfNodesWithLevel(ASTNodePredicate, ASTNodeLevels&, unsigned int) const':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/ASTNode.cpp:1180:74: warning: 'nonnull' argument 'this' compared to NULL [-Wnonnull-compare]
1180 | (vector_pairs.size() == 1 && vector_pairs.back().second == NULL) ||
| ^
[ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/DefinitionURLRegistry.cpp.obj
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/DefinitionURLRegistry.cpp: In static member function 'static int DefinitionURLRegistry::addDefinitionURL(const std::string&, int)':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/DefinitionURLRegistry.cpp:82:30: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
82 | if (getNumDefinitionURLs() == n + 1)
| ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/DefinitionURLRegistry.cpp: In static member function 'static std::string DefinitionURLRegistry::getDefinitionUrlByIndex(int)':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/DefinitionURLRegistry.cpp:106:11: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
106 | if (i == index)
| ~~^~~~~~~~
[ 42%] Building CXX object src/CMakeFiles/sbml-static.dir/sbml/math/FormulaFormatter.cpp.obj
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D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/FormulaParser.cpp: In function 'ASTNode_t* SBML_parseFormula(const char*)':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/FormulaParser.cpp:471:26: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
471 | Stack_push( stack, (void *) FormulaParser_getGoto(state, rule) );
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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L3Parser.cpp: In function 'void yy_stack_print(yy_state_t*, yy_state_t*)':
L3Parser.cpp:1113:11: warning: unused variable 'yybot' [-Wunused-variable]
L3Parser.cpp: In function 'void yy_reduce_print(yy_state_t*, SBML_YYSTYPE*, int)':
L3Parser.cpp:1133:7: warning: unused variable 'yylno' [-Wunused-variable]
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D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/MathML.cpp: In function 'bool isValidCSymbol(SBMLNamespaces*, ASTNodeType_t)':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/MathML.cpp:404:18: warning: unused variable 'version' [-Wunused-variable]
404 | unsigned int version = sbmlns->getVersion();
| ^~~~~~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/MathML.cpp: In function 'void setTypeCI(ASTNode&, const XMLToken&, XMLInputStream&)':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/MathML.cpp:424:16: warning: unused variable 'n' [-Wunused-variable]
424 | unsigned int n = DefinitionURLRegistry::getInstance().getNumDefinitionURLs();
| ^
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/MathML.cpp: In function 'ASTNode* readMathML(XMLInputStream&, std::string, bool)':
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-src/src/sbml/math/MathML.cpp:2177:21: warning: unused variable 'name' [-Wunused-variable]
2177 | const string& name = element1.getName();
| ^~~~
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-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/L3v1CompatibilityValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/L3v2CompatibilityValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/MathMLConsistencyValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/ModelingPracticeValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/OverdeterminedValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/SBMLExternalValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/SBMLInternalValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/SBMLValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/SBOConsistencyValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/StrictUnitConsistencyValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/UnitConsistencyValidator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/VConstraint.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/validator/Validator.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/ExpatAttributes.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/ExpatHandler.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/ExpatParser.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/LibXMLAttributes.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/LibXMLHandler.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/LibXMLNamespaces.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/LibXMLParser.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/LibXMLTranscode.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLAttributes.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLBuffer.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLConstructorException.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLError.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLExtern.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLFileBuffer.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLHandler.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLInputStream.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLLogOverride.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLMemoryBuffer.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLNamespaces.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLNode.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLOutputStream.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLParser.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLToken.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLTokenizer.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLTriple.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XercesAttributes.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XercesHandler.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XercesNamespaces.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XercesParser.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XercesTranscode.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/AlgebraicRule.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/AssignmentRule.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/Compartment.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/CompartmentType.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/Constraint.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/Delay.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/Event.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/EventAssignment.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/ExpectedAttributes.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/FunctionDefinition.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/InitialAssignment.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/KineticLaw.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/ListOf.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/LocalParameter.h
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-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/ModifierSpeciesReference.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/Parameter.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/Priority.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/RateRule.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/Reaction.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/Rule.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLConstructorException.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLError.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorTable.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLNamespaces.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLReader.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTransforms.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypeCodes.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLVisitor.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLWriter.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBO.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBase.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SimpleSpeciesReference.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/Species.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SpeciesReference.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SpeciesType.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/StoichiometryMath.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SyntaxChecker.h
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-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/Unit.h
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-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/UnitKind.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/common/libsbml-config-common.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/common/libsbml-config-packages.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/common/libsbml-namespace.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/common/libsbml-package.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/common/libsbml-version.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/extension/RegisterExtensions.h
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/lib/libsbml-static.a
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/lib/cmake/sbml-static-targets.cmake
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/lib/cmake/sbml-static-targets-release.cmake
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/lib/cmake/sbml-static-config-version.cmake
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/lib/cmake/sbml-static-config.cmake
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/./COPYING.txt
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/./FUNDING.txt
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/./LICENSE.txt
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/./NEWS.txt
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/./README.md
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/./VERSION.txt
-- Installing: D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/lib/pkgconfig/libsbml.pc
Final src/Makevars.win
PKG_CPPFLAGS= -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/
PKG_LIBS= -LD:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/lib/ -lsbml-static -lxml2 -lbz2 -lz -llzma -liconv -lws2_32
all: $(SHLIB) strippedLib
strippedLib: $(SHLIB)
@if command -v strip >/dev/null 2>&1; then strip --strip-debug $(SHLIB) || true; fi
.PHONY: all strippedLib
** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src'
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c compartmentInfo.cpp -o compartmentInfo.o
In file included from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:112,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h:305,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h:48,
from compartmentInfo.cpp:5:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:211:16: warning: 'virtual void XMLErrorLog::add(const std::vector<XMLError*>&)' was hidden [-Woverloaded-virtual=]
211 | virtual void add (const std::vector<XMLError*>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:200:16: warning: 'virtual void XMLErrorLog::add(const std::__cxx11::list<XMLError>&)' was hidden [-Woverloaded-virtual=]
200 | virtual void add (const std::list<XMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c convertReactions.cpp -o convertReactions.o
In file included from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:112,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h:305,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h:48,
from convertReactions.cpp:57:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:211:16: warning: 'virtual void XMLErrorLog::add(const std::vector<XMLError*>&)' was hidden [-Woverloaded-virtual=]
211 | virtual void add (const std::vector<XMLError*>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:200:16: warning: 'virtual void XMLErrorLog::add(const std::__cxx11::list<XMLError>&)' was hidden [-Woverloaded-virtual=]
200 | virtual void add (const std::list<XMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c echoSBML.cpp -o echoSBML.o
In file included from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:112,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h:305,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h:48,
from echoSBML.cpp:3:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:211:16: warning: 'virtual void XMLErrorLog::add(const std::vector<XMLError*>&)' was hidden [-Woverloaded-virtual=]
211 | virtual void add (const std::vector<XMLError*>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:200:16: warning: 'virtual void XMLErrorLog::add(const std::__cxx11::list<XMLError>&)' was hidden [-Woverloaded-virtual=]
200 | virtual void add (const std::list<XMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c getMath.cpp -o getMath.o
In file included from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:112,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h:305,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h:48,
from getMath.cpp:47:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:211:16: warning: 'virtual void XMLErrorLog::add(const std::vector<XMLError*>&)' was hidden [-Woverloaded-virtual=]
211 | virtual void add (const std::vector<XMLError*>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:200:16: warning: 'virtual void XMLErrorLog::add(const std::__cxx11::list<XMLError>&)' was hidden [-Woverloaded-virtual=]
200 | virtual void add (const std::list<XMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c getModel.cpp -o getModel.o
In file included from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:112,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h:305,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h:48,
from getModel.cpp:3:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:211:16: warning: 'virtual void XMLErrorLog::add(const std::vector<XMLError*>&)' was hidden [-Woverloaded-virtual=]
211 | virtual void add (const std::vector<XMLError*>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:200:16: warning: 'virtual void XMLErrorLog::add(const std::__cxx11::list<XMLError>&)' was hidden [-Woverloaded-virtual=]
200 | virtual void add (const std::list<XMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c getSpeciesNum.cpp -o getSpeciesNum.o
In file included from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:112,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h:305,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h:48,
from getSpeciesNum.cpp:3:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:211:16: warning: 'virtual void XMLErrorLog::add(const std::vector<XMLError*>&)' was hidden [-Woverloaded-virtual=]
211 | virtual void add (const std::vector<XMLError*>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:200:16: warning: 'virtual void XMLErrorLog::add(const std::__cxx11::list<XMLError>&)' was hidden [-Woverloaded-virtual=]
200 | virtual void add (const std::list<XMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c paramInfo.cpp -o paramInfo.o
In file included from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:112,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h:305,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h:48,
from paramInfo.cpp:10:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:211:16: warning: 'virtual void XMLErrorLog::add(const std::vector<XMLError*>&)' was hidden [-Woverloaded-virtual=]
211 | virtual void add (const std::vector<XMLError*>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:200:16: warning: 'virtual void XMLErrorLog::add(const std::__cxx11::list<XMLError>&)' was hidden [-Woverloaded-virtual=]
200 | virtual void add (const std::list<XMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c printSBML.cpp -o printSBML.o
In file included from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:112,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h:305,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h:48,
from printSBML.cpp:3:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:211:16: warning: 'virtual void XMLErrorLog::add(const std::vector<XMLError*>&)' was hidden [-Woverloaded-virtual=]
211 | virtual void add (const std::vector<XMLError*>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:200:16: warning: 'virtual void XMLErrorLog::add(const std::__cxx11::list<XMLError>&)' was hidden [-Woverloaded-virtual=]
200 | virtual void add (const std::list<XMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c reactionInfo.cpp -o reactionInfo.o
In file included from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:112,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h:305,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h:48,
from reactionInfo.cpp:10:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:211:16: warning: 'virtual void XMLErrorLog::add(const std::vector<XMLError*>&)' was hidden [-Woverloaded-virtual=]
211 | virtual void add (const std::vector<XMLError*>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:200:16: warning: 'virtual void XMLErrorLog::add(const std::__cxx11::list<XMLError>&)' was hidden [-Woverloaded-virtual=]
200 | virtual void add (const std::list<XMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
g++ -std=gnu++20 -I"D:/RCompile/recent/R-4.6.2/include" -DNDEBUG -ID:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/ -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c speciesInfo.cpp -o speciesInfo.o
In file included from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:112,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLDocument.h:305,
from D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLTypes.h:48,
from speciesInfo.cpp:5:
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:211:16: warning: 'virtual void XMLErrorLog::add(const std::vector<XMLError*>&)' was hidden [-Woverloaded-virtual=]
211 | virtual void add (const std::vector<XMLError*>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/xml/XMLErrorLog.h:200:16: warning: 'virtual void XMLErrorLog::add(const std::__cxx11::list<XMLError>&)' was hidden [-Woverloaded-virtual=]
200 | virtual void add (const std::list<XMLError>& errors);
| ^~~
D:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/include/sbml/SBMLErrorLog.h:326:8: note: by 'SBMLErrorLog::add'
326 | void add (const std::vector<SBMLError>& errors);
| ^~~
g++ -std=gnu++20 -shared -s -static-libgcc -o r2sbml.dll tmp.def RcppExports.o compartmentInfo.o convertReactions.o echoSBML.o getMath.o getModel.o getSpeciesNum.o paramInfo.o printSBML.o reactionInfo.o speciesInfo.o -LD:/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src/libsbml-install/lib/ -lsbml-static -lxml2 -lbz2 -lz -llzma -liconv -lws2_32 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.6.2/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src'
make[1]: Entering directory '/d/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src'
make[1]: Leaving directory '/d/temp/2026_11_04_01_50_00_3425/Rtmp6LxeD9/R.INSTALLf9d9c2cf11ed9/r2sbml/src'
installing to d:/Rcompile/CRANpkg/lib/4.6/00LOCK-r2sbml/00new/r2sbml/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'r2sbml' as r2sbml_0.1.0.zip
* DONE (r2sbml)