* installing *source* package 'lessSEM' ...
** this is package 'lessSEM' version '1.5.6'
** package 'lessSEM' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.2.0'
using C++17
make[1]: Entering directory '/d/temp/2025_10_06_01_50_00_7952/RtmpADwMCL/R.INSTALL19be852855958/lessSEM/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from ../inst/include/lesstimate/include/lesstimate/common_headers.h:21,
from ../inst/include/lesstimate/include/lesstimate.h:4,
from ../inst/include/lessSEM.h:4,
from RcppExports.cpp:4:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c SEM.cpp -o SEM.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from SEM.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c WLS.cpp -o WLS.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from WLS.h:3,
from WLS.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c callFitFunction.cpp -o callFitFunction.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from callFitFunction.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cappedL1.cpp -o cappedL1.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from cappedL1.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from cappedL1.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersCappedL1; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
cappedL1.cpp:89:52: required from 'Rcpp::List istaCappedL1<sem>::optimize(Rcpp::NumericVector, sem&, double, double, double) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
89 | lessSEM::fitResults fitResults_ = lessSEM::ista(
| ~~~~~~~~~~~~~^
90 | SEMFF,
| ~~~~~~
91 | startingValues_,
| ~~~~~~~~~~~~~~~~
92 | proximalOperatorCappedL1_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~
93 | penalty_,
| ~~~~~~~~~
94 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
95 | tp,
| ~~~
96 | smoothTp,
| ~~~~~~~~~
97 | controlIsta
| ~~~~~~~~~~~
98 | );
| ~
cappedL1.cpp:133:44: required from here
133 | .method( "optimize", &istaCappedL1SEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, theta, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c dataset.cpp -o dataset.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from dataset.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c derivativeStructure.cpp -o derivativeStructure.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from derivativeStructure.h:4,
from derivativeStructure.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c elasticNet.cpp -o elasticNet.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from elasticNet.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from elasticNet.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersEnet; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
elasticNet.cpp:80:52: required from 'Rcpp::List istaEnet<sem>::optimize(Rcpp::NumericVector, sem&, double, double) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
80 | lessSEM::fitResults fitResults_ = lessSEM::ista(
| ~~~~~~~~~~~~~^
81 | SEMFF,
| ~~~~~~
82 | startingValues_,
| ~~~~~~~~~~~~~~~~
83 | proximalOperatorLasso_,
| ~~~~~~~~~~~~~~~~~~~~~~~
84 | penalty_,
| ~~~~~~~~~
85 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
86 | tp,
| ~~~
87 | smoothTp,
| ~~~~~~~~~
88 | controlIsta
| ~~~~~~~~~~~
89 | );
| ~
elasticNet.cpp:462:40: required from here
462 | .method( "optimize", &istaEnetSEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In instantiation of 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int) [with T = tuningParametersSmoothElasticNet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:341:36: required from 'lessSEM::fitResults lessSEM::bfgsOptim(model&, numericVector, smoothPenalty<T>&, const T&, const controlBFGS&) [with T = tuningParametersSmoothElasticNet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
341 | parameters_k = bfgsLineSearch(model_,
| ~~~~~~~~~~~~~~^~~~~~~~
342 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
343 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
344 | parameterLabels,
| ~~~~~~~~~~~~~~~~
345 | direction,
| ~~~~~~~~~~
346 | fit_kMinus1,
| ~~~~~~~~~~~~
347 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
348 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
349 |
|
350 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
351 |
|
352 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
353 | control_.sigma,
| ~~~~~~~~~~~~~~~
354 | control_.gamma,
| ~~~~~~~~~~~~~~~
355 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
356 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
elasticNet.cpp:329:57: required from 'Rcpp::List bfgsEnet<sem>::optimize(Rcpp::NumericVector, sem&, double, double) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
329 | lessSEM::fitResults fitResults_ = lessSEM::bfgsOptim(
| ~~~~~~~~~~~~~~~~~~^
330 | SEMFF,
| ~~~~~~
331 | startingValues_,
| ~~~~~~~~~~~~~~~~
332 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
333 | tp,
| ~~~
334 | control_
| ~~~~~~~~
335 | );
| ~
elasticNet.cpp:373:40: required from here
373 | .method( "optimize", &bfgsEnetSEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyLASSOGlmnet; smoothPenalty = penaltyRidgeGlmnet; tuning = tuningParametersEnetGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyLASSOGlmnet; smoothPenalty = penaltyRidgeGlmnet; tuning = tuningParametersEnetGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
elasticNet.cpp:209:54: required from 'Rcpp::List glmnetEnet<sem>::optimize(Rcpp::NumericVector, sem&, arma::rowvec, arma::rowvec) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>; arma::rowvec = arma::Row<double>]'
209 | lessSEM::fitResults fitResults_ = lessSEM::glmnet(
| ~~~~~~~~~~~~~~~^
210 | SEMFF,
| ~~~~~~
211 | startingValues_,
| ~~~~~~~~~~~~~~~~
212 | penalty_,
| ~~~~~~~~~
213 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
214 | tp,
| ~~~
215 | control_
| ~~~~~~~~
216 | );
| ~
elasticNet.cpp:418:42: required from here
418 | .method( "optimize", &glmnetEnetSEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c generalPurposeElasticNet.cpp -o generalPurposeElasticNet.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from generalPurposeElasticNet.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from gpFitFramework.h:4,
from generalPurposeElasticNet.cpp:3:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersEnet; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
generalPurposeElasticNet.cpp:89:52: required from here
89 | lessSEM::fitResults fitResults_ = lessSEM::ista(
| ~~~~~~~~~~~~~^
90 | gpFF,
| ~~~~~
91 | startingValues_,
| ~~~~~~~~~~~~~~~~
92 | proximalOperatorLasso_,
| ~~~~~~~~~~~~~~~~~~~~~~~
93 | penalty_,
| ~~~~~~~~~
94 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
95 | tp,
| ~~~
96 | smoothTp,
| ~~~~~~~~~
97 | controlIsta
| ~~~~~~~~~~~
98 | );
| ~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyLASSOGlmnet; smoothPenalty = penaltyRidgeGlmnet; tuning = tuningParametersEnetGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyLASSOGlmnet; smoothPenalty = penaltyRidgeGlmnet; tuning = tuningParametersEnetGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
generalPurposeElasticNet.cpp:231:54: required from here
231 | lessSEM::fitResults fitResults_ = lessSEM::glmnet(
| ~~~~~~~~~~~~~~~^
232 | gpFF,
| ~~~~~
233 | startingValues_,
| ~~~~~~~~~~~~~~~~
234 | penalty_,
| ~~~~~~~~~
235 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
236 | tp,
| ~~~
237 | control_
| ~~~~~~~~
238 | );
| ~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c glmnet_cappedL1.cpp -o glmnet_cappedL1.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from glmnet_cappedL1.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from glmnet_cappedL1.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyCappedL1Glmnet; smoothPenalty = noSmoothPenalty<tuningParametersCappedL1Glmnet>; tuning = tuningParametersCappedL1Glmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyCappedL1Glmnet; smoothPenalty = noSmoothPenalty<tuningParametersCappedL1Glmnet>; tuning = tuningParametersCappedL1Glmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
glmnet_cappedL1.cpp:91:56: required from 'Rcpp::List glmnetCappedL1<sem>::optimize(Rcpp::NumericVector, sem&, double, double) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
91 | lessSEM::fitResults fitResults_ = lessSEM::glmnet(
| ~~~~~~~~~~~~~~~^
92 | SEMFF,
| ~~~~~~
93 | startingValues_,
| ~~~~~~~~~~~~~~~~
94 | penalty_,
| ~~~~~~~~~
95 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
96 | tp,
| ~~~
97 | control_
| ~~~~~~~~
98 | );
| ~
glmnet_cappedL1.cpp:136:44: required from here
136 | .method( "optimize", &glmnetCappedL1SEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c glmnet_generalPurposeMixedPenalty.cpp -o glmnet_generalPurposeMixedPenalty.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from glmnet_generalPurposeMixedPenalty.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from gpFitFramework.h:4,
from glmnet_generalPurposeMixedPenalty.cpp:3:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c glmnet_lsp.cpp -o glmnet_lsp.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from glmnet_lsp.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from glmnet_lsp.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyLSPGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersLspGlmnet>; tuning = tuningParametersLspGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyLSPGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersLspGlmnet>; tuning = tuningParametersLspGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
glmnet_lsp.cpp:95:56: required from 'Rcpp::List glmnetLsp<sem>::optimize(Rcpp::NumericVector, sem&, double, double) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
95 | lessSEM::fitResults fitResults_ = lessSEM::glmnet(
| ~~~~~~~~~~~~~~~^
96 | SEMFF,
| ~~~~~~
97 | startingValues_,
| ~~~~~~~~~~~~~~~~
98 | penalty_,
| ~~~~~~~~~
99 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
100 | tp,
| ~~~
101 | control_
| ~~~~~~~~
102 | );
| ~
glmnet_lsp.cpp:140:39: required from here
140 | .method( "optimize", &glmnetLspSEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c glmnet_mcp.cpp -o glmnet_mcp.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from glmnet_mcp.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from glmnet_mcp.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMcpGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMcpGlmnet>; tuning = tuningParametersMcpGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMcpGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMcpGlmnet>; tuning = tuningParametersMcpGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
glmnet_mcp.cpp:95:54: required from 'Rcpp::List glmnetMcp<sem>::optimize(Rcpp::NumericVector, sem&, double, double) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
95 | lessSEM::fitResults fitResults_ = lessSEM::glmnet(
| ~~~~~~~~~~~~~~~^
96 | SEMFF,
| ~~~~~~
97 | startingValues_,
| ~~~~~~~~~~~~~~~~
98 | penalty_,
| ~~~~~~~~~
99 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
100 | tp,
| ~~~
101 | control_
| ~~~~~~~~
102 | );
| ~
glmnet_mcp.cpp:140:41: required from here
140 | .method( "optimize", &glmnetMcpSEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c glmnet_mixed.cpp -o glmnet_mixed.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from glmnet_mixed.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from glmnet_mixed.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c glmnet_scad.cpp -o glmnet_scad.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from glmnet_scad.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from glmnet_scad.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltySCADGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersScadGlmnet>; tuning = tuningParametersScadGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltySCADGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersScadGlmnet>; tuning = tuningParametersScadGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
glmnet_scad.cpp:95:54: required from 'Rcpp::List glmnetScad<sem>::optimize(Rcpp::NumericVector, sem&, double, double) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
95 | lessSEM::fitResults fitResults_ = lessSEM::glmnet(
| ~~~~~~~~~~~~~~~^
96 | SEMFF,
| ~~~~~~
97 | startingValues_,
| ~~~~~~~~~~~~~~~~
98 | penalty_,
| ~~~~~~~~~
99 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
100 | tp,
| ~~~
101 | control_
| ~~~~~~~~
102 | );
| ~
glmnet_scad.cpp:140:42: required from here
140 | .method( "optimize", &glmnetScadSEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c gradients.cpp -o gradients.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from gradients.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c implied.cpp -o implied.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from implied.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c impliedDerivatives.cpp -o impliedDerivatives.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from impliedDerivatives.h:4,
from impliedDerivatives.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ista_generalPurposeMixedPenalty.cpp -o ista_generalPurposeMixedPenalty.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from ista_generalPurposeMixedPenalty.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from gpFitFramework.h:4,
from ista_generalPurposeMixedPenalty.cpp:3:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ista_lsp.cpp -o ista_lsp.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from ista_lsp.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from ista_lsp.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersLSP; U = tuningParametersLSP; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
ista_lsp.cpp:82:52: required from 'Rcpp::List istaLSP<sem>::optimize(Rcpp::NumericVector, sem&, double, double) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
82 | lessSEM::fitResults fitResults_ = lessSEM::ista(
| ~~~~~~~~~~~~~^
83 | SEMFF,
| ~~~~~~
84 | startingValues_,
| ~~~~~~~~~~~~~~~~
85 | proximalOperatorLSP_,
| ~~~~~~~~~~~~~~~~~~~~~
86 | penalty_,
| ~~~~~~~~~
87 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
88 | tp,
| ~~~
89 | smoothTp,
| ~~~~~~~~~
90 | controlIsta
| ~~~~~~~~~~~
91 | );
| ~
ista_lsp.cpp:127:39: required from here
127 | .method( "optimize", &istaLSPSEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, theta, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ista_mcp.cpp -o ista_mcp.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from ista_mcp.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from ista_mcp.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMcp; U = tuningParametersMcp; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
ista_mcp.cpp:95:52: required from 'Rcpp::List istaMcp<sem>::optimize(Rcpp::NumericVector, sem&, double, double) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
95 | lessSEM::fitResults fitResults_ = lessSEM::ista(
| ~~~~~~~~~~~~~^
96 | SEMFF,
| ~~~~~~
97 | startingValues_,
| ~~~~~~~~~~~~~~~~
98 | proximalOperatorMcp_,
| ~~~~~~~~~~~~~~~~~~~~~
99 | penalty_,
| ~~~~~~~~~
100 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
101 | tp,
| ~~~
102 | smoothTp,
| ~~~~~~~~~
103 | controlIsta
| ~~~~~~~~~~~
104 | );
| ~
ista_mcp.cpp:139:37: required from here
139 | .method( "optimize", &istaMcpSEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, theta, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ista_mixed.cpp -o ista_mixed.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from ista_mixed.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from ista_mixed.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ista_scad.cpp -o ista_scad.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from ista_scad.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
In file included from ../inst/include/lesstimate/include/lesstimate.h:5,
from ../inst/include/lessSEM.h:4,
from SEMFitFramework.h:4,
from ista_scad.cpp:4:
../inst/include/lesstimate/include/lesstimate/ista_class.h: In function 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&)':
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:518:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_class.h:10,
from ../inst/include/lesstimate/include/lesstimate.h:7:
../inst/include/lesstimate/include/lesstimate/bfgs.h: In function 'arma::mat lessSEM::BFGS(const arma::rowvec&, const arma::rowvec&, const arma::mat&, const arma::rowvec&, const arma::rowvec&, bool, double, bool)':
../inst/include/lesstimate/include/lesstimate/bfgs.h:71:25: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
71 | if (!arma::is_finite(Hessian_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In function 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:9,
from ../inst/include/lesstimate/include/lesstimate.h:8:
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h: In member function 'double lessSEM::penaltyMcpGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersMcpGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_mcp.h:282:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
282 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate/glmnet_penalties.h:10:
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h: In member function 'double lessSEM::penaltyLSPGlmnet::getZ(unsigned int, const arma::rowvec&, const arma::rowvec&, const arma::rowvec&, const arma::mat&, const lessSEM::tuningParametersLspGlmnet&)':
../inst/include/lesstimate/include/lesstimate/glmnet_lsp.h:216:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
216 | if (!arma::is_finite(z[i]))
| ~~~~~~~~~~~~~~~^~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
In file included from ../inst/include/lesstimate/include/lesstimate.h:9:
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h: In function 'arma::rowvec lessSEM::bfgsLineSearch(model&, smoothPenalty<T>&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const T&, double, double, double, int, int)':
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:188:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
188 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/bfgsOptim.h:226:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
226 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersMixedPenalty; U = tuningParametersEnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:308:34: required from here
308 | fitResults fitResults_ = ista(
| ~~~~^
309 | userModel,
| ~~~~~~~~~~
310 | startingValues,
| ~~~~~~~~~~~~~~~
311 | proximalOperatorMixedPenalty_,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
312 | penalty_,
| ~~~~~~~~~
313 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
314 | tp,
| ~~~
315 | smoothTp,
| ~~~~~~~~~
316 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h: In instantiation of 'arma::rowvec lessSEM::glmnetLineSearch(model&, nonsmoothPenalty&, smoothPenalty&, const arma::rowvec&, const stringVector&, const arma::rowvec&, double, const arma::rowvec&, const arma::mat&, const tuning&, double, double, double, int, int) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; arma::rowvec = arma::Row<double>; stringVector = Rcpp::Vector<16>; arma::mat = arma::Mat<double>]':
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:491:38: required from 'lessSEM::fitResults lessSEM::glmnet(model&, numericVector, nonsmoothPenalty&, smoothPenalty&, const tuning&, const controlGLMNET&) [with nonsmoothPenalty = penaltyMixedGlmnet; smoothPenalty = noSmoothPenalty<tuningParametersMixedGlmnet>; tuning = tuningParametersMixedGlmnet; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
491 | parameters_k = glmnetLineSearch(model_,
| ~~~~~~~~~~~~~~~~^~~~~~~~
492 | penalty_,
| ~~~~~~~~~
493 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
494 | parameters_kMinus1,
| ~~~~~~~~~~~~~~~~~~~
495 | parameterLabels,
| ~~~~~~~~~~~~~~~~
496 | direction,
| ~~~~~~~~~~
497 | fit_kMinus1,
| ~~~~~~~~~~~~
498 | gradients_kMinus1,
| ~~~~~~~~~~~~~~~~~~
499 | Hessian_kMinus1,
| ~~~~~~~~~~~~~~~~
500 |
|
501 | tuningParameters,
| ~~~~~~~~~~~~~~~~~
502 |
|
503 | control_.stepSize,
| ~~~~~~~~~~~~~~~~~~
504 | control_.sigma,
| ~~~~~~~~~~~~~~~
505 | control_.gamma,
| ~~~~~~~~~~~~~~~
506 | control_.maxIterLine,
| ~~~~~~~~~~~~~~~~~~~~~
507 | control_.verbose);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/simplified_interfaces.h:131:36: required from here
131 | fitResults fitResults_ = glmnet(
| ~~~~~~^
132 | userModel,
| ~~~~~~~~~~
133 | startingValues,
| ~~~~~~~~~~~~~~~
134 | pen,
| ~~~~
135 | smoothPen,
| ~~~~~~~~~~
136 | tp,
| ~~~
137 | controlOptimizer);
| ~~~~~~~~~~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:306:27: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/glmnet_class.h:346:29: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
346 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h: In instantiation of 'lessSEM::fitResults lessSEM::ista(model&, numericVector, proximalOperator<T>&, penalty<T>&, smoothPenalty<U>&, const T&, const U&, const control&) [with T = tuningParametersScad; U = tuningParametersScad; numericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]':
ista_scad.cpp:102:52: required from 'Rcpp::List istaScad<sem>::optimize(Rcpp::NumericVector, sem&, double, double) [with sem = SEMCpp; Rcpp::List = Rcpp::Vector<19>; Rcpp::NumericVector = Rcpp::Vector<14, Rcpp::PreserveStorage>]'
102 | lessSEM::fitResults fitResults_ = lessSEM::ista(
| ~~~~~~~~~~~~~^
103 | SEMFF,
| ~~~~~~
104 | startingValues_,
| ~~~~~~~~~~~~~~~~
105 | proximalOperatorScad_,
| ~~~~~~~~~~~~~~~~~~~~~~
106 | penalty_,
| ~~~~~~~~~
107 | smoothPenalty_,
| ~~~~~~~~~~~~~~~
108 | tp,
| ~~~
109 | smoothTp,
| ~~~~~~~~~
110 | controlIsta
| ~~~~~~~~~~~
111 | );
| ~
ista_scad.cpp:146:40: required from here
146 | .method( "optimize", &istaScadSEM::optimize, "Optimizes the model. Expects SEM, labeled vector with starting values, theta, lambda, and alpha")
| ^~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:306:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
306 | if (!arma::is_finite(fit_k))
| ~~~~~~~~~~~~~~~^~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:318:29: warning: 'bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]' is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
318 | if (!arma::is_finite(penalizedFit_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
../inst/include/lesstimate/include/lesstimate/ista_class.h:369:31: warning: 'bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = Mat<double>; typename T1::elem_type = double]' is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
369 | if (!arma::is_finite(gradients_k))
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c logicalMatch.cpp -o logicalMatch.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mgSEM.cpp -o mgSEM.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from mgSEM.h:4,
from mgSEM.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c multivariateNormal.cpp -o multivariateNormal.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from multivariateNormal.h:3,
from multivariateNormal.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c parameters.cpp -o parameters.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from parameters.h:4,
from parameters.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppParallel/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -fopenmp -I../inst/include/ -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c scores.cpp -o scores.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo:26,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:32,
from scores.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported'
373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported")
| ^
g++ -shared -s -static-libgcc -o lessSEM.dll tmp.def RcppExports.o SEM.o WLS.o callFitFunction.o cappedL1.o dataset.o derivativeStructure.o elasticNet.o generalPurposeElasticNet.o glmnet_cappedL1.o glmnet_generalPurposeMixedPenalty.o glmnet_lsp.o glmnet_mcp.o glmnet_mixed.o glmnet_scad.o gradients.o implied.o impliedDerivatives.o ista_generalPurposeMixedPenalty.o ista_lsp.o ista_mcp.o ista_mixed.o ista_scad.o logicalMatch.o mgSEM.o multivariateNormal.o parameters.o scores.o -fopenmp -LD:/RCompile/recent/R-4.5.1/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.5.1/bin/x64 -lRblas -lgfortran -lquadmath -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/libs/x64 -lRcppParallel -LD:/RCompile/CRANpkg/lib/4.5/RcppParallel/lib/x64 -ltbb -ltbbmalloc -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.1/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2025_10_06_01_50_00_7952/RtmpADwMCL/R.INSTALL19be852855958/lessSEM/src'
make[1]: Entering directory '/d/temp/2025_10_06_01_50_00_7952/RtmpADwMCL/R.INSTALL19be852855958/lessSEM/src'
make[1]: Leaving directory '/d/temp/2025_10_06_01_50_00_7952/RtmpADwMCL/R.INSTALL19be852855958/lessSEM/src'
installing to d:/Rcompile/CRANpkg/lib/4.5/00LOCK-lessSEM/00new/lessSEM/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'lessSEM' as lessSEM_1.5.6.zip
* DONE (lessSEM)