* installing *source* package 'harmony' ...
** this is package 'harmony' version '2.0.3'
** package 'harmony' successfully unpacked and MD5 sums checked
** using staged installation
checking for single-precision BLAS procedures (sdot_, sgemm_)...
  single-precision BLAS NOT found
checking for single-precision LAPACK procedures (sgesv_)...
  single-precision LAPACK NOT found
checking for double-precision BLAS procedures (ddot_, dgemm_)...
  double-precision BLAS found
checking for double-precision LAPACK procedures (dgesv_)...
  double-precision LAPACK found
  single-precision routines not fully available -- using double scalar
configure: src/Makevars written
  PKG_CXXFLAGS = -DARMA_USE_CURRENT -DHARMONY_SCALAR_DOUBLE
  PKG_LIBS     = -LD:/RCompile/recent/R-4.6.0/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.6.0/bin/x64 -lRblas -lgfortran -lquadmath
** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_05_15_01_50_01_4727/RtmpKAZFCh/R.INSTALL526458c7b/harmony/src'
g++ -std=gnu++20  -I"D:/RCompile/recent/R-4.6.0/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppProgress/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -DARMA_USE_CURRENT -DHARMONY_SCALAR_DOUBLE   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20  -I"D:/RCompile/recent/R-4.6.0/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppProgress/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -DARMA_USE_CURRENT -DHARMONY_SCALAR_DOUBLE   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c harmony.cpp -o harmony.o
harmony.cpp: In member function 'void harmony::moe_correct_ridge_cpp()':
harmony.cpp:374:64: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
  374 |       if ((current_covariate < covariate_bounds.size()) && !(b < covariate_bounds[current_covariate])) {
harmony.cpp:395:64: warning: comparison of integer expressions of different signedness: 'unsigned int' and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
  395 |       if ((current_covariate < covariate_bounds.size()) && !(b < covariate_bounds[current_covariate])) {
g++ -std=gnu++20  -I"D:/RCompile/recent/R-4.6.0/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppProgress/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -DARMA_USE_CURRENT -DHARMONY_SCALAR_DOUBLE   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c timer.cpp -o timer.o
g++ -std=gnu++20  -I"D:/RCompile/recent/R-4.6.0/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppProgress/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -DARMA_USE_CURRENT -DHARMONY_SCALAR_DOUBLE   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c utils.cpp -o utils.o
g++ -std=gnu++20 -shared -s -static-libgcc -o harmony.dll tmp.def RcppExports.o harmony.o timer.o utils.o -LD:/RCompile/recent/R-4.6.0/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.6.0/bin/x64 -lRblas -lgfortran -lquadmath -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.6.0/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_05_15_01_50_01_4727/RtmpKAZFCh/R.INSTALL526458c7b/harmony/src'
make[1]: Entering directory '/d/temp/2026_05_15_01_50_01_4727/RtmpKAZFCh/R.INSTALL526458c7b/harmony/src'
make[1]: Leaving directory '/d/temp/2026_05_15_01_50_01_4727/RtmpKAZFCh/R.INSTALL526458c7b/harmony/src'
installing to d:/Rcompile/CRANpkg/lib/4.6/00LOCK-harmony/00new/harmony/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'harmony' as harmony_2.0.3.zip
* DONE (harmony)