* installing *source* package 'gamselBayes' ...
** this is package 'gamselBayes' version '2.0-3'
** package 'gamselBayes' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.2.0'
make[1]: Entering directory '/d/temp/2025_07_19_01_50_00_654/RtmpItE8nW/R.INSTALL2f6a429eb56f0/gamselBayes/src'
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c approxLogML.cpp -o approxLogML.o
approxLogML.cpp: In function 'double approxLogML(double, double, double, arma::vec, double, arma::vec, arma::vec, arma::mat, double, double, double, double, double, arma::vec, arma::vec, arma::vec, arma::mat, arma::mat, arma::vec, arma::vec, double, arma::vec, double, double, double, double, double, int, arma::uvec, int, arma::vec, arma::vec)':
approxLogML.cpp:71:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
   71 |       for (int k=0; k<ncZvec(j); k++)
      |                     ~^~~~~~~~~~
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c drawInvGaussVec.cpp -o drawInvGaussVec.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c gamselBayesMCMCinner.cpp -o gamselBayesMCMCinner.o
gamselBayesMCMCinner.cpp: In function 'Rcpp::List gamselBayesMCMCinner(arma::vec, arma::mat, arma::mat, int, arma::uvec, int, int, arma::uvec, arma::uvec, arma::vec, arma::mat, arma::vec, arma::mat, arma::mat, double, double, double, double, double, double, int, int)':
gamselBayesMCMCinner.cpp:125:25: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
  125 |          for (int k=0; k<ncZvec(j); k++)
      |                        ~^~~~~~~~~~
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c gamselBayesMFVBinner.cpp -o gamselBayesMFVBinner.o
gamselBayesMFVBinner.cpp: In function 'Rcpp::List gamselBayesMFVBinner(arma::vec, arma::mat, arma::mat, int, arma::uvec, int, int, arma::uvec, arma::uvec, arma::vec, arma::mat, arma::vec, arma::mat, arma::mat, double, double, double, double, double, double, int, double, int)':
gamselBayesMFVBinner.cpp:150:25: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
  150 |          for (int k=0; k<ncZvec(j); k++)
      |                        ~^~~~~~~~~~
gamselBayesMFVBinner.cpp:373:40: warning: 'lambdaqaEps' may be used uninitialized [-Wmaybe-uninitialized]
  373 |       logMargLik(itNum-1) = approxLogML(muqBeta0,sigsqqBeta0,logitBeta,muqgammaBeta,
      |                             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  374 |                                         muqrecipSigsqBeta,muqbBeta,muqBetaTilde,SigmaqBetaTilde,
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  375 |                                         muqrecipaBeta,lambdaqSigsqBeta,sBetaHYP,lambdaqaBeta,logitU,
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  376 |                                         muqgammaU,muqrecipSigsqU,muqbU,muqUtilde,sigsqqUtilde,
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  377 |                                         muqrecipaU,lambdaqSigsqU,sUHYP,lambdaqaU,muqrecipaEps,
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  378 |                                         muqrecipSigsqEps,lambdaqaEps,lambdaqSigsqEps,sEpsHYP,n,ncZvec,
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  379 |                                         familyNum,ySign,omega20);
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~
gamselBayesMFVBinner.cpp:65:11: note: 'lambdaqaEps' was declared here
   65 |    double lambdaqaEps;
      |           ^~~~~~~~~~~
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c logPhi.cpp -o logPhi.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c omitVecEnt.cpp -o omitVecEnt.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c printPercMsgs.cpp -o printPercMsgs.o
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c rTruncNormPos.cpp -o rTruncNormPos.o
rTruncNormPos.cpp: In function 'double rTruncNormPos(double)':
rTruncNormPos.cpp:59:13: warning: 'x' may be used uninitialized [-Wmaybe-uninitialized]
   59 |    return (x);
      |             ^
rTruncNormPos.cpp:25:11: note: 'x' was declared here
   25 |    double x;
      |           ^
g++ -std=gnu++17  -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c zetad.cpp -o zetad.o
g++ -std=gnu++17 -shared -s -static-libgcc -o gamselBayes.dll tmp.def RcppExports.o approxLogML.o drawInvGaussVec.o gamselBayesMCMCinner.o gamselBayesMFVBinner.o logPhi.o omitVecEnt.o printPercMsgs.o rTruncNormPos.o zetad.o -LD:/RCompile/recent/R-4.5.1/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.5.1/bin/x64 -lRblas -lgfortran -lquadmath -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.1/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2025_07_19_01_50_00_654/RtmpItE8nW/R.INSTALL2f6a429eb56f0/gamselBayes/src'
make[1]: Entering directory '/d/temp/2025_07_19_01_50_00_654/RtmpItE8nW/R.INSTALL2f6a429eb56f0/gamselBayes/src'
make[1]: Leaving directory '/d/temp/2025_07_19_01_50_00_654/RtmpItE8nW/R.INSTALL2f6a429eb56f0/gamselBayes/src'
installing to d:/Rcompile/CRANpkg/lib/4.5/00LOCK-gamselBayes/00new/gamselBayes/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'gamselBayes' as gamselBayes_2.0-3.zip
* DONE (gamselBayes)