* installing *source* package 'VarSelLCM' ...
** this is package 'VarSelLCM' version '2.1.3.1'
** package 'VarSelLCM' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.2.0'
make[1]: Entering directory '/d/temp/2025_09_02_09_03_13_2588/RtmpIXYzYX/R.INSTALL2dec06cec6356/VarSelLCM/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Algorithm.cpp -o Algorithm.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Algorithm.h:24,
from Algorithm.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
Algorithm.cpp: In member function 'void Algorithm::Run(Rcpp::S4*)':
Algorithm.cpp:29:24: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
29 | for (int ini=0; ini<omegainit.n_cols; ini++){
| ~~~^~~~~~~~~~~~~~~~~
Algorithm.cpp: In member function 'void Algorithm::Optimize_partition()':
Algorithm.cpp:93:23: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
93 | for (int it=0; it < who.n_rows; it++){
| ~~~^~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c AlgorithmCategorical.cpp -o AlgorithmCategorical.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataCategorical.h:16,
from ../inst/include/AlgorithmCategorical.h:12,
from AlgorithmCategorical.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
AlgorithmCategorical.cpp: In member function 'double AlgorithmCategorical::IntegreOneVariableCategoricalDiscrim(const int&)':
AlgorithmCategorical.cpp:18:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
18 | for (int i=0; i<data_p->m_whotakewhat[j][h].n_rows; i++) nkjh(m_zCandCurrent(data_p->m_whotakewhat[j][h](i)), h)+=data_p->m_w(data_p->m_whotakewhat[j][h](i));
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
AlgorithmCategorical.cpp: In member function 'double AlgorithmCategorical::IntegreOneVariableCategoricalDiscrim(const int&, const arma::colvec&)':
AlgorithmCategorical.cpp:37:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
37 | for (int i=0; i<data_p->m_whotakewhat[j][h].n_rows; i++) nkjh(z(data_p->m_whotakewhat[j][h](i)), h)+=data_p->m_w(data_p->m_whotakewhat[j][h](i));
| ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c AlgorithmContinuous.cpp -o AlgorithmContinuous.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from ../inst/include/AlgorithmContinuous.h:12,
from AlgorithmContinuous.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c AlgorithmInteger.cpp -o AlgorithmInteger.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataInteger.h:13,
from ../inst/include/AlgorithmInteger.h:12,
from AlgorithmInteger.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
AlgorithmInteger.cpp: In member function 'double AlgorithmInteger::IntegreOneVariable(const arma::vec&, const int&)':
AlgorithmInteger.cpp:24:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
24 | for (int i=0; i<v.n_rows; i++)
| ~^~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c AlgorithmMixed.cpp -o AlgorithmMixed.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from ../inst/include/DataMixed.h:9,
from ../inst/include/AlgorithmMixed.h:12,
from AlgorithmMixed.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DataCategorical.cpp -o DataCategorical.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataCategorical.h:16,
from DataCategorical.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DataContinuous.cpp -o DataContinuous.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from DataContinuous.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DataInteger.cpp -o DataInteger.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataInteger.h:13,
from DataInteger.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c DataMixed.cpp -o DataMixed.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from ../inst/include/DataMixed.h:9,
from DataMixed.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ParamCategorical.cpp -o ParamCategorical.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Param.h:15,
from ../inst/include/ParamCategorical.h:12,
from ParamCategorical.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
ParamCategorical.cpp: In member function 'void ParamCategorical::egalise(arma::colvec)':
ParamCategorical.cpp:26:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
26 | for (int j=0; j<omega.n_rows; j++){
| ~^~~~~~~~~~~~~
ParamCategorical.cpp:28:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
28 | for (int k=1; k<m_alpha[j].n_rows;k++){
| ~^~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ParamContinuous.cpp -o ParamContinuous.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from ../inst/include/ParamContinuous.h:13,
from ParamContinuous.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
ParamContinuous.cpp: In constructor 'ParamContinuous::ParamContinuous(const DataContinuous*, const arma::colvec&, const int&)':
ParamContinuous.cpp:20:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
20 | for (int j=0; j<m_mu.n_cols; j++){
| ~^~~~~~~~~~~~
ParamContinuous.cpp:29:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
29 | for (int j=0; j<m_mu.n_cols; j++){
| ~^~~~~~~~~~~~
ParamContinuous.cpp: In constructor 'ParamContinuous::ParamContinuous(const DataContinuous*, const arma::colvec&, const int&, arma::ivec)':
ParamContinuous.cpp:43:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
43 | for (int j=0; j<m_mu.n_cols; j++){
| ~^~~~~~~~~~~~
ParamContinuous.cpp:51:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
51 | for (int j=0; j<m_mu.n_cols; j++){
| ~^~~~~~~~~~~~
ParamContinuous.cpp: In member function 'void ParamContinuous::egalise(arma::colvec)':
ParamContinuous.cpp:61:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
61 | for (int j=0; j<m_mu.n_cols; j++){
| ~^~~~~~~~~~~~
ParamContinuous.cpp:63:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
63 | for (int k=1; k<m_mu.n_rows;k++){
| ~^~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ParamInteger.cpp -o ParamInteger.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataInteger.h:13,
from ../inst/include/ParamInteger.h:13,
from ParamInteger.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
ParamInteger.cpp: In constructor 'ParamInteger::ParamInteger(const DataInteger*, const arma::colvec&, const int&)':
ParamInteger.cpp:18:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
18 | for (int j=0; j<m_lambda.n_cols; j++){
| ~^~~~~~~~~~~~~~~~
ParamInteger.cpp:25:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
25 | for (int j=0; j<m_lambda.n_cols; j++){
| ~^~~~~~~~~~~~~~~~
ParamInteger.cpp: In constructor 'ParamInteger::ParamInteger(const DataInteger*, const arma::colvec&, const int&, arma::ivec)':
ParamInteger.cpp:39:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
39 | for (int j=0; j<m_lambda.n_cols; j++){
| ~^~~~~~~~~~~~~~~~
ParamInteger.cpp:45:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
45 | for (int j=0; j<m_lambda.n_cols; j++){
| ~^~~~~~~~~~~~~~~~
ParamInteger.cpp: In member function 'void ParamInteger::egalise(const DataInteger*, arma::colvec)':
ParamInteger.cpp:54:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
54 | for (int j=0; j<m_lambda.n_cols; j++){
| ~^~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ParamMixed.cpp -o ParamMixed.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from ../inst/include/DataMixed.h:9,
from ../inst/include/ParamMixed.h:12,
from ParamMixed.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from RcppExports.cpp:4:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c VarSelLCMmixte.cpp -o VarSelLCMmixte.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from ../inst/include/DataMixed.h:9,
from ../inst/include/AlgorithmMixed.h:12,
from VarSelLCMmixte.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c XEM.cpp -o XEM.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from ../inst/include/XEM.h:24,
from XEM.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
XEM.cpp: In member function 'void XEM::Run()':
XEM.cpp:63:14: warning: unused variable 'indicebest' [-Wunused-variable]
63 | double indicebest = (loglikeSmall).max(index);
| ^~~~~~~~~~
XEM.cpp: In member function 'arma::colvec XEM::FindZMAP()':
XEM.cpp:75:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
75 | for (int i=0; i<tmplogproba.n_rows; i++){
| ~^~~~~~~~~~~~~~~~~~~
XEM.cpp:74:10: warning: variable 'max_val' set but not used [-Wunused-but-set-variable]
74 | double max_val=0;
| ^~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c XEMCategorical.cpp -o XEMCategorical.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataCategorical.h:16,
from ../inst/include/XEMCategorical.h:16,
from XEMCategorical.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c XEMContinuous.cpp -o XEMContinuous.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from ../inst/include/XEMContinuous.h:14,
from XEMContinuous.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c XEMInteger.cpp -o XEMInteger.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataInteger.h:13,
from ../inst/include/XEMInteger.h:14,
from XEMInteger.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
XEMInteger.cpp: In function 'arma::Col<double> dlogPoisson(const arma::Col<double>&, const arma::Col<double>&, double)':
XEMInteger.cpp:6:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
6 | for (int i=0; i<tmpval.n_rows;i++) tmpval(i) -= lgamma(x(i)+1);
| ~^~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c XEMMixed.cpp -o XEMMixed.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from ../inst/include/DataMixed.h:9,
from ../inst/include/XEMMixed.h:14,
from XEMMixed.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
XEMMixed.cpp: In function 'arma::Col<double> dlogPoissonbis(const arma::Col<double>&, const arma::Col<double>&, double)':
XEMMixed.cpp:11:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
11 | for (int i=0; i<tmpval.n_rows;i++) tmpval(i) -= lgamma(x(i)+1);
| ~^~~~~~~~~~~~~~
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.1/include" -DNDEBUG -Wall -I../inst/include/ -I'D:/RCompile/CRANpkg/lib/4.5/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c XEMPen.cpp -o XEMPen.o
In file included from D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo.h:29,
from ../inst/include/Data.h:13,
from ../inst/include/DataContinuous.h:13,
from ../inst/include/DataMixed.h:9,
from ../inst/include/XEMPen.h:4,
from XEMPen.cpp:1:
D:/RCompile/CRANpkg/lib/4.5/RcppArmadillo/include/RcppArmadillo/version/arma.h:71:153: note: '#pragma message: Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.'
71 | #pragma message("Using fallback compilation with Armadillo 14.6.3. Please consider defining -DARMA_USE_CURRENT. See GitHub issue #475 for more.")
| ^
XEMPen.cpp: In function 'arma::Col<double> dlogPoissonter(const arma::Col<double>&, const arma::Col<double>&, double)':
XEMPen.cpp:11:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
11 | for (int i=0; i<tmpval.n_rows;i++) tmpval(i) -= lgamma(x(i)+1);
| ~^~~~~~~~~~~~~~
XEMPen.cpp: In member function 'void XEMPen::Run()':
XEMPen.cpp:114:10: warning: variable 'indicebest' set but not used [-Wunused-but-set-variable]
114 | double indicebest = (loglikepen).max(index);
| ^~~~~~~~~~
XEMPen.cpp: In member function 'arma::colvec XEMPen::FindZMAP()':
XEMPen.cpp:131:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
131 | for (int i=0; i<tmplogproba.n_rows; i++){
| ~^~~~~~~~~~~~~~~~~~~
XEMPen.cpp:130:10: warning: variable 'max_val' set but not used [-Wunused-but-set-variable]
130 | double max_val=0;
| ^~~~~~~
XEMPen.cpp: In member function 'void XEMPen::OneEM()':
XEMPen.cpp:176:10: warning: unused variable 'repere' [-Wunused-variable]
176 | int repere=0;
| ^~~~~~
g++ -std=gnu++17 -shared -s -static-libgcc -o VarSelLCM.dll tmp.def Algorithm.o AlgorithmCategorical.o AlgorithmContinuous.o AlgorithmInteger.o AlgorithmMixed.o DataCategorical.o DataContinuous.o DataInteger.o DataMixed.o ParamCategorical.o ParamContinuous.o ParamInteger.o ParamMixed.o RcppExports.o VarSelLCMmixte.o XEM.o XEMCategorical.o XEMContinuous.o XEMInteger.o XEMMixed.o XEMPen.o -LD:/RCompile/recent/R-4.5.1/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.5.1/bin/x64 -lRblas -lgfortran -lquadmath -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.1/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2025_09_02_09_03_13_2588/RtmpIXYzYX/R.INSTALL2dec06cec6356/VarSelLCM/src'
make[1]: Entering directory '/d/temp/2025_09_02_09_03_13_2588/RtmpIXYzYX/R.INSTALL2dec06cec6356/VarSelLCM/src'
make[1]: Leaving directory '/d/temp/2025_09_02_09_03_13_2588/RtmpIXYzYX/R.INSTALL2dec06cec6356/VarSelLCM/src'
installing to d:/Rcompile/CRANpkg/lib/4.5/00LOCK-VarSelLCM/00new/VarSelLCM/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'predict' in package 'VarSelLCM'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'VarSelLCM' as VarSelLCM_2.1.3.1.zip
* DONE (VarSelLCM)