* installing *source* package 'BRISC' ...
** package 'BRISC' successfully unpacked and MD5 sums checked
** using staged installation
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
using C compiler: 'gcc.exe (GCC) 13.2.0'
using C++ compiler: 'g++.exe (GCC) 13.2.0'
using C++11
make[1]: Entering directory '/d/temp/RtmpcHZy0z/R.INSTALL2c02c676d2fdb/BRISC/src'
g++ -std=gnu++11 -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c BRISC.cpp -o BRISC.o
BRISC.cpp: In function 'SEXPREC* BRISC_bootstrapcpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
BRISC.cpp:475:18: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
475 | int i_0, ret = 0;
| ^~~
BRISC.cpp: In function 'SEXPREC* BRISC_estimatecpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
BRISC.cpp:662:18: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
662 | int i_0, ret = 0;
| ^~~
BRISC.cpp: In function 'SEXPREC* BRISC_correlationcpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
BRISC.cpp:914:16: warning: unused variable 'logDet' [-Wunused-variable]
914 | double logDet = updateBF(B, F, c, C, D, d, nnIndxLU, CIndx, n, theta, covModel, nThreads, fix_nugget);
| ^~~~~~
BRISC.cpp: In function 'SEXPREC* BRISC_decorrelationcpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
BRISC.cpp:1076:16: warning: unused variable 'logDet' [-Wunused-variable]
1076 | double logDet = updateBF(B, F, c, C, D, d, nnIndxLU, CIndx, n, theta, covModel, nThreads, fix_nugget);
| ^~~~~~
BRISC.cpp: In function 'SEXPREC* BRISC_estimateneighborcpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
BRISC.cpp:1238:13: warning: unused variable 'i' [-Wunused-variable]
1238 | int i, k, l, nProtect=0;
| ^
BRISC.cpp:1238:16: warning: unused variable 'k' [-Wunused-variable]
1238 | int i, k, l, nProtect=0;
| ^
BRISC.cpp:1238:19: warning: unused variable 'l' [-Wunused-variable]
1238 | int i, k, l, nProtect=0;
| ^
BRISC.cpp:1248:17: warning: unused variable 'coords' [-Wunused-variable]
1248 | double *coords = REAL(coords_r);
| ^~~~~~
BRISC.cpp:1323:18: warning: variable 'ret' set but not used [-Wunused-but-set-variable]
1323 | int i_0, ret = 0;
| ^~~
g++ -std=gnu++11 -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c BRISC_Predict.cpp -o BRISC_Predict.o
BRISC_Predict.cpp: In function 'SEXPREC* BRISC_predictioncpp(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)':
BRISC_Predict.cpp:80:9: warning: variable 'nTheta' set but not used [-Wunused-but-set-variable]
80 | int nTheta, sigmaSqIndx, tauSqIndx, phiIndx, nuIndx;
| ^~~~~~
gcc -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c init.c -o init.o
gcc -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c lbfgs.c -o lbfgs.o
g++ -std=gnu++11 -I"D:/RCompile/recent/R-4.4.0/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -fopenmp -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c util.cpp -o util.o
util.cpp: In function 'void fastNN(int, int, double*, int, double*, int*, int*, double*)':
util.cpp:175:11: warning: unused variable 'k' [-Wunused-variable]
175 | int i,j,k;
| ^
g++ -shared -s -static-libgcc -o BRISC.dll tmp.def BRISC.o BRISC_Predict.o init.o lbfgs.o util.o -LD:/RCompile/recent/R-4.4.0/bin/x64 -lRlapack -LD:/RCompile/recent/R-4.4.0/bin/x64 -lRblas -lgfortran -lm -lquadmath -fopenmp -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.4.0/bin/x64 -lR
make[1]: Leaving directory '/d/temp/RtmpcHZy0z/R.INSTALL2c02c676d2fdb/BRISC/src'
make[1]: Entering directory '/d/temp/RtmpcHZy0z/R.INSTALL2c02c676d2fdb/BRISC/src'
make[1]: Leaving directory '/d/temp/RtmpcHZy0z/R.INSTALL2c02c676d2fdb/BRISC/src'
installing to d:/Rcompile/CRANpkg/lib/4.4/00LOCK-BRISC/00new/BRISC/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'BRISC' as BRISC_1.0.5.zip
* DONE (BRISC)