Check results for 'stars'

checking for file ‘stars/DESCRIPTION’ ... OK

checking package namespace information ... OK

checking if this is a source package ... OK

checking if there is a namespace ... OK

checking for executable files ... OK

checking for hidden files and directories ... OK

checking for portable file names ... OK

checking for sufficient/correct file permissions ... OK

checking whether package ‘stars’ can be installed ... [7s/7s] OK

checking package directory ... OK

checking ‘build’ directory ... OK

checking DESCRIPTION meta-information ... OK

checking top-level files ... OK

checking for left-over files ... OK

checking index information ... OK

checking package subdirectories ... OK

checking R files for non-ASCII characters ... OK

checking R files for syntax errors ... OK

checking whether the package can be loaded ... OK

checking whether the package can be loaded with stated dependencies ... OK

checking whether the package can be unloaded cleanly ... OK

checking whether the namespace can be loaded with stated dependencies ... OK

checking whether the namespace can be unloaded cleanly ... OK

checking loading without being on the library search path ... OK

checking dependencies in R code ... OK

checking S3 generic/method consistency ... OK

checking replacement functions ... OK

checking foreign function calls ... OK

checking R code for possible problems ... [9s/9s] OK

checking Rd files ... [0s/0s] OK

checking Rd metadata ... OK

checking Rd cross-references ... OK

checking for missing documentation entries ... OK

checking for code/documentation mismatches ... OK

checking Rd \usage sections ... OK

checking Rd contents ... OK

checking for unstated dependencies in examples ... OK

checking contents of ‘data’ directory ... OK

checking data for non-ASCII characters ... OK

checking LazyData ... OK

checking data for ASCII and uncompressed saves ... OK

checking installed files from ‘inst/doc’ ... OK

checking files in ‘vignettes’ ... OK

checking examples ... [21s/21s] OK

checking for unstated dependencies in ‘tests’ ... OK

checking tests ... [69s/70s] OK
  Running ‘aggregate.R’ [2s/2s]
  Comparing ‘aggregate.Rout’ to ‘aggregate.Rout.save’ ...4c4
< Linking to GEOS 3.8.1, GDAL 3.2.1, PROJ 7.2.1
---
> Linking to GEOS 3.9.0, GDAL 3.2.1, PROJ 7.2.1
57c57
< file42ae767308a2.tif 33 199.25 365.5 365.5 531.75 698
---
> file46ef83309cd.tif 33 199.25 365.5 365.5 531.75 698
  Running ‘area.R’ [1s/1s]
  Comparing ‘area.Rout’ to ‘area.Rout.save’ ...51a52,64
> /PRODUCT/longitude,
> /PRODUCT/latitude,
> /PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column,
> stars object with 2 dimensions and 1 attribute
> attribute(s):
> Min. 1st Qu. Median Mean 3rd Qu. Max.
> area [m^2] 25983110 28008871 35690854 42912281 54562137 100943458
> dimension(s):
> from to offset delta refsys point values x/y
> x 1 450 NA NA WGS 84 NA [450x278] -5.81066 [°],...,30.9468 [°] [x]
> y 1 278 NA NA WGS 84 NA [450x278] 28.3605 [°],...,51.4686 [°] [y]
> curvilinear grid
> There were 15 warnings (use warnings() to see them)
  Running ‘crop.R’ [3s/3s]
  Comparing ‘crop.Rout’ to ‘crop.Rout.save’ ... OK
  Running ‘curvilinear.R’ [1s/1s]
  Comparing ‘curvilinear.Rout’ to ‘curvilinear.Rout.save’ ...54a55,88
> /PRODUCT/longitude,
> /PRODUCT/latitude,
> /PRODUCT/SUPPORT_DATA/DETAILED_RESULTS/nitrogendioxide_summed_total_column,
> stars object with 3 dimensions and 1 attribute
> attribute(s):
> Min. 1st Qu. Median
> nitrogendioxide_summed_total_c... 3.650813e-05 7.451281e-05 8.296968e-05
> Mean 3rd Qu. Max. NA's
> nitrogendioxide_summed_total_c... 8.581399e-05 9.397442e-05 0.0004535302 330
> dimension(s):
> from to offset delta refsys point values
> x 1 450 NA NA WGS 84 NA [450x278] -5.81066 [°],...,30.9468 [°]
> y 1 278 NA NA WGS 84 NA [450x278] 28.3605 [°],...,51.4686 [°]
> time 1 1 NA NA NA NA NULL
> x/y
> x [x]
> y [y]
> time
> curvilinear grid
> stars object with 3 dimensions and 1 attribute
> attribute(s):
> Min. 1st Qu. Median
> nitrogendioxide_summed_total_c... 4.383528e-05 7.480038e-05 8.344652e-05
> Mean 3rd Qu. Max. NA's
> nitrogendioxide_summed_total_c... 8.607374e-05 9.398567e-05 0.000192237 32
> dimension(s):
> from to offset delta refsys point values x/y
> x 1 50 NA NA WGS 84 NA [50x31] -5.81066 [°],...,30.1405 [°] [x]
> y 1 31 NA NA WGS 84 NA [50x31] 28.7828 [°],...,51.4686 [°] [y]
> time 1 1 NA NA NA NA NULL
> curvilinear grid
> null device
> 1
> There were 15 warnings (use warnings() to see them)
  Running ‘datasets.R’ [1s/1s]
  Comparing ‘datasets.Rout’ to ‘datasets.Rout.save’ ...30,32c30,38
< Warning message:
< In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
< there is no package called 'starsdata'
---
> stars_proxy object with 1 attribute in 1 file(s):
> $`MTD_MSIL1C.xml:10m:EPSG_32632`
> [1] "[...]/MTD_MSIL1C.xml:10m:EPSG_32632"
>
> dimension(s):
> from to offset delta refsys point values x/y
> x 1 10980 3e+05 10 WGS 84 / UTM zone 32N NA NULL [x]
> y 1 10980 6e+06 -10 WGS 84 / UTM zone 32N NA NULL [y]
> band 1 4 NA NA NA NA B4,...,B8
  Running ‘dimensions.R’ [1s/2s]
  Comparing ‘dimensions.Rout’ to ‘dimensions.Rout.save’ ... OK
  Running ‘extract.R’ [1s/1s]
  Comparing ‘extract.Rout’ to ‘extract.Rout.save’ ... OK
  Running ‘gridtypes.R’ [1s/1s]
  Comparing ‘gridtypes.Rout’ to ‘gridtypes.Rout.save’ ... OK
  Running ‘nc.R’ [1s/1s]
  Comparing ‘nc.Rout’ to ‘nc.Rout.save’ ... OK
  Running ‘plot.R’ [2s/2s]
  Comparing ‘plot.Rout’ to ‘plot.Rout.save’ ... OK
  Running ‘predict.R’ [3s/3s]
  Comparing ‘predict.Rout’ to ‘predict.Rout.save’ ... OK
  Running ‘proxy.R’ [5s/5s]
  Comparing ‘proxy.Rout’ to ‘proxy.Rout.save’ ...266a267,345
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> stars_proxy object with 2 attributes in 18 file(s):
> $sst
> [1] "[...]/avhrr-only-v2.19810901.nc:sst" "[...]/avhrr-only-v2.19810902.nc:sst"
> [3] "[...]/avhrr-only-v2.19810903.nc:sst" "[...]/avhrr-only-v2.19810904.nc:sst"
> [5] "[...]/avhrr-only-v2.19810905.nc:sst" "[...]/avhrr-only-v2.19810906.nc:sst"
> [7] "[...]/avhrr-only-v2.19810907.nc:sst" "[...]/avhrr-only-v2.19810908.nc:sst"
> [9] "[...]/avhrr-only-v2.19810909.nc:sst"
>
> $anom
> [1] "[...]/avhrr-only-v2.19810901.nc:anom"
> [2] "[...]/avhrr-only-v2.19810902.nc:anom"
> [3] "[...]/avhrr-only-v2.19810903.nc:anom"
> [4] "[...]/avhrr-only-v2.19810904.nc:anom"
> [5] "[...]/avhrr-only-v2.19810905.nc:anom"
> [6] "[...]/avhrr-only-v2.19810906.nc:anom"
> [7] "[...]/avhrr-only-v2.19810907.nc:anom"
> [8] "[...]/avhrr-only-v2.19810908.nc:anom"
> [9] "[...]/avhrr-only-v2.19810909.nc:anom"
>
> dimension(s):
> from to offset delta refsys point values x/y
> x 1 1440 0 0.25 NA NA NULL [x]
> y 1 720 90 -0.25 NA NA NULL [y]
> zlev 1 1 0 [m] NA NA NA NULL
> time 1 9 1981-09-01 UTC 1 days POSIXct NA NULL
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> stars object with 4 dimensions and 2 attributes
> attribute(s), summary of first 1e+05 cells:
> Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
> sst [C*°] -1.80 -1.19 -1.05 -0.3201670 -0.20 9.36 13360
> anom [C*°] -4.69 -0.06 0.52 0.2299385 0.71 3.70 13360
> dimension(s):
> from to offset delta refsys point values x/y
> x 1 1440 0 0.25 NA NA NULL [x]
> y 1 720 90 -0.25 NA NA NULL [y]
> zlev 1 1 0 [m] NA NA NA NULL
> time 1 9 1981-09-01 UTC 1 days POSIXct NA NULL
> stars object with 5 dimensions and 1 attribute
> attribute(s), summary of first 1e+05 cells:
> Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
> sst.anom -1.8 -1.19 -1.05 -0.320167 -0.2 9.36 13360
> dimension(s):
> from to offset delta refsys point values x/y
> x 1 1440 0 0.25 NA NA NULL [x]
> y 1 720 90 -0.25 NA NA NULL [y]
> zlev 1 1 0 [m] NA NA NA NULL
> time 1 9 1981-09-01 UTC 1 days POSIXct NA NULL
> new_dim 1 2 NA NA NA NA sst , anom
> Error in c.stars_proxy(l[[1]], l[[2]], l[[3]], along = list(times = as.Date("1981-09-01") + :
> for proxy objects, along argument as list is not implemented
> stars_proxy object with 1 attribute in 2 file(s):
> $sst.anom
> [1] "[...]/avhrr-only-v2.19810901.nc:sst"
> [2] "[...]/avhrr-only-v2.19810901.nc:anom"
>
> dimension(s):
> from to offset delta refsys point values x/y
> x 1 1440 0 0.25 NA NA NULL [x]
> y 1 720 90 -0.25 NA NA NULL [y]
> zlev 1 1 0 [m] NA NA NA NULL
> time 1 1 1981-09-01 UTC NA POSIXct NA NULL
> times 1 2 1981-09-01 1 days Date NA NULL
  Running ‘raster.R’ [6s/6s]
  Comparing ‘raster.Rout’ to ‘raster.Rout.save’ ... OK
  Running ‘rasterize.R’ [1s/1s]
  Comparing ‘rasterize.Rout’ to ‘rasterize.Rout.save’ ... OK
  Running ‘rectilinear.R’ [1s/1s]
  Comparing ‘rectilinear.Rout’ to ‘rectilinear.Rout.save’ ... OK
  Running ‘redimension.R’ [2s/2s]
  Comparing ‘redimension.Rout’ to ‘redimension.Rout.save’ ... OK
  Running ‘sf.R’ [2s/2s]
  Comparing ‘sf.Rout’ to ‘sf.Rout.save’ ... OK
  Running ‘sp.R’ [2s/2s]
  Comparing ‘sp.Rout’ to ‘sp.Rout.save’ ... OK
  Running ‘spacetime.R’ [2s/2s]
  Comparing ‘spacetime.Rout’ to ‘spacetime.Rout.save’ ... OK
  Running ‘spatstat.R’ [2s/2s]
  Comparing ‘spatstat.Rout’ to ‘spatstat.Rout.save’ ... OK
  Running ‘stars.R’ [7s/7s]
  Comparing ‘stars.Rout’ to ‘stars.Rout.save’ ...447a448,477
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> sst, anom,
> stars object with 4 dimensions and 2 attributes
> attribute(s), summary of first 1e+05 cells:
> Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
> sst [C*°] -1.80 -1.19 -1.05 -0.3201670 -0.20 9.36 13360
> anom [C*°] -4.69 -0.06 0.52 0.2299385 0.71 3.70 13360
> dimension(s):
> from to offset delta refsys point values x/y
> x 1 1440 0 0.25 NA NA NULL [x]
> y 1 720 90 -0.25 NA NA NULL [y]
> zlev 1 1 0 [m] NA NA NA NULL
> time 1 9 1981-09-01 UTC 1 days POSIXct NA NULL
> stars object with 3 dimensions and 2 attributes
> attribute(s), summary of first 1e+05 cells:
> Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
> sst [C*°] -1.80 -1.19 -1.05 -0.3201670 -0.20 9.36 13360
> anom [C*°] -4.69 -0.06 0.52 0.2299385 0.71 3.70 13360
> dimension(s):
> from to offset delta refsys point values x/y
> x 1 1440 0 0.25 NA NA NULL [x]
> y 1 720 90 -0.25 NA NA NULL [y]
> times 1 3 1981-09-01 1 days Date NA NULL
  Running ‘subset.R’ [2s/2s]
  Comparing ‘subset.Rout’ to ‘subset.Rout.save’ ... OK
  Running ‘testthat.R’ [10s/10s]
  Comparing ‘testthat.Rout’ to ‘testthat.Rout.save’ ...9d8
< [ FAIL 0 | WARN 0 | SKIP 0 | PASS 100 ]
  Running ‘tidy.R’ [6s/6s]
  Comparing ‘tidy.Rout’ to ‘tidy.Rout.save’ ... OK
  Running ‘transform.R’ [1s/1s]
  Comparing ‘transform.Rout’ to ‘transform.Rout.save’ ... OK
  Running ‘warp.R’ [1s/1s]
  Comparing ‘warp.Rout’ to ‘warp.Rout.save’ ... OK
  Running ‘write.R’ [1s/1s]
  Comparing ‘write.Rout’ to ‘write.Rout.save’ ... OK

checking for unstated dependencies in vignettes ... OK

checking package vignettes in ‘inst/doc’ ... OK

checking running R code from vignettes ... [2s/2s] NONE
  ‘stars1.Rmd’ using ‘UTF-8’... [0s/0s] OK
  ‘stars2.Rmd’ using ‘UTF-8’... [0s/0s] OK
  ‘stars3.Rmd’ using ‘UTF-8’... [0s/0s] OK
  ‘stars4.Rmd’ using ‘UTF-8’... [0s/0s] OK
  ‘stars5.Rmd’ using ‘UTF-8’... [0s/0s] OK
  ‘stars6.Rmd’ using ‘UTF-8’... [0s/0s] OK
  ‘stars7.Rmd’ using ‘UTF-8’... [0s/0s] OK

checking re-building of vignette outputs ... [32s/35s] OK

checking PDF version of manual ... OK