Check results for 'parameters'

using R version 4.6.0 (2026-04-24)
using platform: x86_64-apple-darwin20
R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 14.2.0
running under: macOS Ventura 13.3.1
using session charset: UTF-8 * current time: 2026-04-27 14:06:08 UTC
checking for file ‘parameters/DESCRIPTION’ ... OK
checking extension type ... Package
this is package ‘parameters’ version ‘0.28.3’
package encoding: UTF-8
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checking whether package ‘parameters’ can be installed ... [22s/32s] OK See the install log for details.
checking installed package size ... OK
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checking DESCRIPTION meta-information ... OK
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checking files in ‘vignettes’ ... OK
checking examples ... [25s/68s] OK
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checking tests ... [105s/117s] ERROR Running ‘testthat.R’ [105s/117s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(parameters) > library(testthat) > > test_check("parameters") Starting 2 test processes. > test-format_model_parameters.R: Cannot compute confidence intervals for random effects parameters. > test-format_model_parameters.R: Your model may suffer from singularity (see `?lme4::isSingular` and > test-format_model_parameters.R: `?performance::check_singularity`). Saving _problems/test-format_model_parameters-190.R > test-include_reference.R: Cannot compute confidence intervals for random effects parameters. > test-include_reference.R: Your model may suffer from singularity (see `?lme4::isSingular` and > test-include_reference.R: `?performance::check_singularity`). Saving _problems/test-include_reference-120.R > test-model_parameters.afex_aov.R: Contrasts set to contr.sum for the following variables: condition, talk > test-model_parameters.afex_aov.R: Contrasts set to contr.sum for the following variables: condition, talk > test-model_parameters.afex_aov.R: Contrasts set to contr.sum for the following variables: treatment, gender > test-n_factors.R: [1] "# Method Agreement Procedure:" > test-n_factors.R: [2] "" > test-n_factors.R: [3] "The choice of 1 dimensions is supported by 11 (84.62%) methods out of 13 (Bartlett, Anderson, Lawley, Optimal coordinates, Acceleration factor, Parallel analysis, Kaiser criterion, Scree (SE), Scree (R2), VSS complexity 1, Velicer's MAP)." > test-n_factors.R: [1] "# Method Agreement Procedure:" > test-n_factors.R: [2] "" > test-n_factors.R: [3] "The choice of 1 dimensions is supported by 3 (60.00%) methods out of 5 (Velicer's MAP, BIC, BIC (adjusted))." [ FAIL 2 | WARN 0 | SKIP 130 | PASS 713 ] ══ Skipped tests (130) ═════════════════════════════════════════════════════════ • On CRAN (117): 'test-GLMMadaptive.R:1:1', 'test-Hmisc.R:1:1', 'test-averaging.R:1:1', 'test-backticks.R:1:1', 'test-bootstrap_emmeans.R:1:1', 'test-bootstrap_parameters.R:1:1', 'test-brms.R:1:1', 'test-compare_parameters.R:90:5', 'test-compare_parameters.R:95:5', 'test-complete_separation.R:4:1', 'test-complete_separation.R:18:1', 'test-complete_separation.R:28:1', 'test-coxph.R:69:1', 'test-efa.R:1:1', 'test-emmGrid-df_colname.R:1:1', 'test-equivalence_test.R:3:1', 'test-equivalence_test.R:13:1', 'test-equivalence_test.R:22:3', 'test-equivalence_test.R:112:3', 'test-factor_analysis.R:2:3', 'test-factor_analysis.R:124:3', 'test-format_model_parameters2.R:2:3', 'test-gam.R:30:1', 'test-get_scores.R:1:1', 'test-glmer.R:1:1', 'test-glmmTMB-2.R:1:1', 'test-glmmTMB-profile_CI.R:2:3', 'test-glmmTMB.R:1:1', 'test-helper.R:1:1', 'test-ivreg.R:45:1', 'test-lcmm.R:1:1', 'test-include_reference.R:4:1', 'test-include_reference.R:62:1', 'test-lmerTest.R:1:1', 'test-mipo.R:5:1', 'test-mipo.R:23:1', 'test-mmrm.R:1:1', 'test-model_parameters.BFBayesFactor.R:4:3', 'test-model_parameters.BFBayesFactor.R:77:3', 'test-model_parameters.BFBayesFactor.R:114:3', 'test-model_parameters.anova.R:1:1', 'test-model_parameters.aov.R:1:1', 'test-model_parameters.aov_es_ci.R:183:3', 'test-model_parameters.aov_es_ci.R:294:3', 'test-model_parameters.aov_es_ci.R:344:3', 'test-model_parameters.aov_es_ci.R:397:3', 'test-model_parameters.bracl.R:1:1', 'test-model_parameters.cgam.R:1:1', 'test-model_parameters.coxme.R:1:1', 'test-marginaleffects.R:170:1', 'test-marginaleffects.R:199:3', 'test-model_parameters.epi2x2.R:1:1', 'test-model_parameters.efa_cfa.R:30:3', 'test-model_parameters.fixest_multi.R:1:1', 'test-model_parameters.fixest.R:2:3', 'test-model_parameters.fixest.R:77:3', 'test-model_parameters.fixest.R:145:1', 'test-model_parameters.glmgee.R:1:1', 'test-model_parameters.logistf.R:1:1', 'test-model_parameters.logitr.R:1:1', 'test-model_parameters.mclogit.R:1:1', 'test-model_parameters.mediate.R:1:1', 'test-model_parameters.glm.R:35:1', 'test-model_parameters.glm.R:67:1', 'test-model_parameters.mixed.R:2:1', 'test-model_parameters.nnet.R:5:1', 'test-model_parameters_df.R:1:1', 'test-model_parameters.vgam.R:3:1', 'test-model_parameters_ordinal.R:1:1', 'test-model_parameters_random_pars.R:1:1', 'test-model_parameters_std.R:1:1', 'test-model_parameters_std_mixed.R:1:1', 'test-n_factors.R:10:3', 'test-n_factors.R:26:3', 'test-n_factors.R:76:3', 'test-p_adjust.R:1:1', 'test-p_direction.R:1:1', 'test-p_significance.R:1:1', 'test-p_value.R:14:1', 'test-panelr.R:1:1', 'test-pipe.R:1:1', 'test-pca.R:64:1', 'test-polr.R:1:1', 'test-plm.R:97:1', 'test-posterior.R:1:1', 'test-pool_parameters.R:1:1', 'test-pool_parameters.R:32:1', 'test-print_AER_labels.R:5:1', 'test-printing-stan.R:1:1', 'test-printing.R:1:1', 'test-pretty_names.R:40:1', 'test-pretty_names.R:73:5', 'test-quantreg.R:1:1', 'test-random_effects_ci-glmmTMB.R:3:1', 'test-random_effects_ci.R:1:1', 'test-robust.R:1:1', 'test-serp.R:5:1', 'test-printing2.R:14:5', 'test-printing2.R:21:5', 'test-printing2.R:26:5', 'test-printing2.R:31:5', 'test-printing2.R:36:5', 'test-printing2.R:48:5', 'test-printing2.R:91:7', 'test-printing2.R:126:5', 'test-svylme.R:1:1', 'test-svyolr.R:1:1', 'test-visualisation_recipe.R:1:1', 'test-wrs2.R:55:1', 'test-standardize_parameters.R:28:1', 'test-standardize_parameters.R:36:3', 'test-standardize_parameters.R:61:3', 'test-standardize_parameters.R:173:3', 'test-standardize_parameters.R:297:3', 'test-standardize_parameters.R:332:3', 'test-standardize_parameters.R:425:3', 'test-standardize_parameters.R:515:3' • On Mac (7): 'test-group_level_total.R:1:1', 'test-nestedLogit.R:78:3', 'test-rstanarm.R:1:1', 'test-sampleSelection.R:1:1', 'test-simulate_model.R:1:1', 'test-simulate_parameters.R:1:1', 'test-weightit.R:1:1' • TODO: check this test locally, fails on CI, probably due to scoping issues? (1): 'test-marginaleffects.R:280:3' • TODO: fix this test (1): 'test-model_parameters.lqmm.R:40:3' • TODO: this one actually is not correct. (1): 'test-model_parameters_robust.R:127:3' • empty test (2): 'test-wrs2.R:69:1', 'test-wrs2.R:81:1' • {performance} is not installed (1): 'test-dominance_analysis.R:1:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-format_model_parameters.R:190:3'): format, compare_parameters, mixed models ── Error in ``[.data.frame`(out, c("Parameter", "Level", "Coefficient", "SE", ci_cols, stat_column, "df_error", "p", "Effects", "Group"))`: undefined columns selected Backtrace: ▆ 1. └─parameters::compare_parameters(...) at test-format_model_parameters.R:190:3 2. └─base::lapply(...) 3. └─parameters (local) FUN(X[[i]], ...) 4. ├─parameters::model_parameters(...) 5. └─parameters:::model_parameters.glmmTMB(...) 6. └─parameters:::.add_random_effects_glmmTMB(...) 7. ├─parameters:::.extract_random_variances(...) 8. └─parameters:::.extract_random_variances.glmmTMB(...) 9. ├─base::suppressWarnings(...) 10. │ └─base::withCallingHandlers(...) 11. └─parameters:::.extract_random_variances_helper(...) 12. ├─...[] 13. └─base::`[.data.frame`(...) ── Error ('test-include_reference.R:120:3'): include_reference, random effects models ── Error in ``[.data.frame`(out, c("Parameter", "Level", "Coefficient", "SE", ci_cols, stat_column, "df_error", "p", "Effects", "Group"))`: undefined columns selected Backtrace: ▆ 1. ├─parameters::model_parameters(...) at test-include_reference.R:120:3 2. └─parameters:::model_parameters.glmmTMB(...) 3. └─parameters:::.add_random_effects_glmmTMB(...) 4. ├─parameters:::.extract_random_variances(...) 5. └─parameters:::.extract_random_variances.glmmTMB(...) 6. ├─base::suppressWarnings(...) 7. │ └─base::withCallingHandlers(...) 8. └─parameters:::.extract_random_variances_helper(...) 9. ├─...[] 10. └─base::`[.data.frame`(...) [ FAIL 2 | WARN 0 | SKIP 130 | PASS 713 ] Error: ! Test failures. Execution halted
checking for unstated dependencies in vignettes ... OK
checking package vignettes ... OK
checking re-building of vignette outputs ... [14s/26s] OK
checking PDF version of manual ... [13s/19s] OK
DONE Status: 1 ERROR
using check arguments '--no-clean-on-error '