* installing *source* package ‘mrfDepth’ ... ** package ‘mrfDepth’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using Fortran compiler: ‘GNU Fortran (GCC) 12.2.0’ using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c AdjOutlyingness.cpp -o AdjOutlyingness.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c Auxiliary.f -o Auxiliary.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c Bagplot.f -o Bagplot.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfSpaceDepth2D.f -o HalfSpaceDepth2D.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfSpaceDepthContour2D.f -o HalfSpaceDepthContour2D.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfSpaceDepthDeepestLoc.f -o HalfSpaceDepthDeepestLoc.o f951: Warning: Nonconforming tab character in column 1 of line 330 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 331 [-Wtabs] /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -O1 -g -c -o HalfSpaceDepthMedian.o HalfSpaceDepthMedian.f /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfSpaceDepthND.f -o HalfSpaceDepthND.o HalfSpaceDepthND.f:307:11: 307 | I=N*INT(RAN(1),4)+1. | 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] HalfSpaceDepthND.f:312:11: 312 | L=N*INT(RAN(1),4)+1. | 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c HalfspaceDepth3D.f -o HalfspaceDepth3D.o HalfspaceDepth3D.f:211:72: 211 | Z(I)=Z(I)-W | ^ Warning: ‘w’ may be used uninitialized [-Wmaybe-uninitialized] HalfspaceDepth3D.f:150:28: 150 | DOUBLE PRECISION U,V,W,X(N),Y(N),Z(N),EPS | ^ note: ‘w’ was declared here HalfspaceDepth3D.f:210:72: 210 | Y(I)=Y(I)-V | ^ Warning: ‘v’ may be used uninitialized [-Wmaybe-uninitialized] HalfspaceDepth3D.f:150:26: 150 | DOUBLE PRECISION U,V,W,X(N),Y(N),Z(N),EPS | ^ note: ‘v’ was declared here HalfspaceDepth3D.f:209:72: 209 | X(I)=X(I)-U | ^ Warning: ‘u’ may be used uninitialized [-Wmaybe-uninitialized] HalfspaceDepth3D.f:150:24: 150 | DOUBLE PRECISION U,V,W,X(N),Y(N),Z(N),EPS | ^ note: ‘u’ was declared here /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c LinAlg.f -o LinAlg.o LinAlg.f:110:41: 110 | subroutine eigen(nm,n,a,w,z,fv1,fv2,ierr) | 1 Warning: Unused dummy argument ‘fv2’ at (1) [-Wunused-dummy-argument] clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c Outlyingness.cpp -o Outlyingness.o /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c Random.f -o Random.o Random.f:434:5: 434 | 9000 CONTINUE | 1 Warning: Label 9000 at (1) defined but not used [-Wunused-label] LinAlg.f:320:72: 320 | p = -s * s2 * c3 * el1 * e(l) / dl1 | ^ Warning: ‘s2’ may be used uninitialized [-Wmaybe-uninitialized] LinAlg.f:189:53: 189 | double precision c,c2,c3,dl1,el1,f,g,h,p,r,s,s2,tst1,tst2,pythag | ^ note: ‘s2’ was declared here LinAlg.f:320:72: 320 | p = -s * s2 * c3 * el1 * e(l) / dl1 | ^ Warning: ‘c3’ may be used uninitialized [-Wmaybe-uninitialized] LinAlg.f:189:30: 189 | double precision c,c2,c3,dl1,el1,f,g,h,p,r,s,s2,tst1,tst2,pythag | ^ note: ‘c3’ was declared here /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c RegresDepth3D.f -o RegresDepth3D.o RegresDepth3D.f:160:4: 160 | 200 END | 1 Warning: Label 200 at (1) defined but not used [-Wunused-label] /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c RegresDepth4D.f -o RegresDepth4D.o RegresDepth4D.f:169:4: 169 | 200 END | 1 Warning: Label 200 at (1) defined but not used [-Wunused-label] RegresDepth4D.f:281:53: 281 | SUBROUTINE RDEPTH41B(T,N,X1,X2,X3,XN1,XN2,XN3,Y,ALPHA,RESID,JRES, | 1 Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument] RegresDepth4D.f:215:43: 215 | SUBROUTINE STANDRDEPTH41(N,X,XN,EPS,J) | 1 Warning: Unused dummy argument ‘j’ at (1) [-Wunused-dummy-argument] /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c RegresDepthDeepest.f -o RegresDepthDeepest.o LinAlg.f:609:72: 609 | LDEL=LDEL-JDM | ^ Warning: ‘ldel’ may be used uninitialized [-Wmaybe-uninitialized] LinAlg.f:581:56: 581 | DOUBLE PRECISION HVEC(MAXPP1),TURN,SWAP,DETER,LDEL | ^ note: ‘ldel’ was declared here /opt/gfortran/bin/gfortran -arch x86_64 -fPIC -Wall -g -O2 -c RegresDepthNd.f -o RegresDepthNd.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c auxyl.cpp -o auxyl.o f951: Warning: Nonconforming tab character in column 1 of line 36 [-Wtabs] f951: Warning: Nonconforming tab character in column 1 of line 113 [-Wtabs] RegresDepthNd.f:172:4: 172 | 300 END | 1 Warning: Label 300 at (1) defined but not used [-Wunused-label] RegresDepthNd.f:372:11: 372 | I=N*RAN(1)+1.D0 | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] RegresDepthNd.f:377:11: 377 | L=N*RAN(1)+1. | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] RegresDepthNd.f:578:46: 578 | DOUBLE PRECISION X(MAXN,MAXP1),R(NNP1),S | 1 Warning: Unused variable ‘s’ declared at (1) [-Wunused-variable] RegresDepthNd.f:349:41: 349 | SUBROUTINE DEP_RDEPTH_APPR(N,NP,NP1,NDIR,MAXN,MAXP1, | 1 Warning: Unused dummy argument ‘np1’ at (1) [-Wunused-dummy-argument] clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c dirOutl.cpp -o dirOutl.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c dirOutl_aux.cpp -o dirOutl_aux.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c hdepthND.cpp -o hdepthND.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c mc.cpp -o mc.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c medcouple.cpp -o medcouple.o mc.cpp:50:21: warning: variable 'wright' set but not used [-Wunused-but-set-variable] int64_t wleft,wmid,wright,w_tot=0,wrest=0; ^ clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c mrfDepth_init.c -o mrfDepth_init.o clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.4/RcppArmadillo/include' -I/opt/R/x86_64/include -DEIGEN_DONT_PARALLELIZE -fPIC -falign-functions=64 -Wall -g -O2 -c randy.cpp -o randy.o 1 warning generated. clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o mrfDepth.so AdjOutlyingness.o Auxiliary.o Bagplot.o HalfSpaceDepth2D.o HalfSpaceDepthContour2D.o HalfSpaceDepthDeepestLoc.o HalfSpaceDepthMedian.o HalfSpaceDepthND.o HalfspaceDepth3D.o LinAlg.o Outlyingness.o Random.o RegresDepth3D.o RegresDepth4D.o RegresDepthDeepest.o RegresDepthNd.o auxyl.o dirOutl.o dirOutl_aux.o hdepthND.o mc.o medcouple.o mrfDepth_init.o randy.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.4/mrfDepth.Rcheck/00LOCK-mrfDepth/00new/mrfDepth/libs ** generating debug symbols (dSYM) ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mrfDepth)