• using R version 4.3.0 beta (2023-04-08 r84203)
  • using platform: x86_64-apple-darwin20 (64-bit)
  • R was compiled by
        Apple clang version 14.0.3 (clang-1403.0.22.14.1)
        GNU Fortran (GCC) 12.2.0
  • running under: macOS Ventura 13.3
  • using session charset: UTF-8
  • checking for file ‘matrixStats/DESCRIPTION’ ... OK
  • this is package ‘matrixStats’ version ‘0.63.0’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘matrixStats’ can be installed ... [14s/17s] OK
  • used C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
  • used SDK: ‘MacOSX11.3.sdk’
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking ‘build’ directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... [0s/0s] OK
  • checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
  • checking whether the package can be unloaded cleanly ... [0s/0s] OK
  • checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
  • checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
  • checking loading without being on the library search path ... [0s/0s] OK
  • checking startup messages can be suppressed ... [0s/0s] OK
  • checking dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [5s/6s] OK
  • checking Rd files ... [1s/1s] OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking compiled code ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking files in ‘vignettes’ ... OK
  • checking examples ... [1s/2s] OK
  • checking for unstated dependencies in ‘tests’ ... OK
  • checking tests ... [28s/39s] ERROR
      Running ‘allocArray.R’ [0s/0s]
      Running ‘allocMatrix.R’ [0s/0s]
      Running ‘allocVector.R’ [0s/0s]
      Running ‘anyMissing.R’ [0s/0s]
      Running ‘anyMissing_subset.R’ [0s/0s]
      Running ‘benchmark.R’ [12s/17s]
      Running ‘binCounts.R’ [0s/0s]
      Running ‘binCounts_subset.R’ [0s/0s]
      Running ‘binMeans,binCounts.R’ [0s/0s]
      Running ‘binMeans,binCounts_subset.R’ [0s/0s]
      Running ‘count.R’ [0s/0s]
      Running ‘count_subset.R’ [0s/0s]
      Running ‘diff2.R’ [0s/0s]
      Running ‘diff2_subset.R’ [0s/0s]
      Running ‘indexByRow.R’ [0s/0s]
      Running ‘logSumExp.R’ [0s/0s]
      Running ‘logSumExp_subset.R’ [0s/0s]
      Running ‘mean2.R’ [0s/0s]
      Running ‘mean2_subset.R’ [0s/0s]
      Running ‘product.R’ [0s/0s]
      Running ‘product_subset.R’ [0s/0s]
      Running ‘psortKM.R’ [0s/0s]
      Running ‘rowAllAnys.R’ [1s/1s]
      Running ‘rowAllAnys_subset.R’ [7s/12s]
      Running ‘rowAvgsPerColSet.R’ [0s/0s]
      Running ‘rowAvgsPerColSet_subset.R’ [0s/0s]
      Running ‘rowCollapse.R’ [0s/0s]
      Running ‘rowCollapse_subset.R’ [0s/0s]
    Running the tests in ‘tests/rowCollapse_subset.R’ failed.
    Last 13 lines of output:
      
      R is free software and comes with ABSOLUTELY NO WARRANTY.
      You are welcome to redistribute it under certain conditions.
      Type 'license()' or 'licence()' for distribution details.
      
      R is a collaborative project with many contributors.
      Type 'contributors()' for more information and
      'citation()' on how to cite R or R packages in publications.
      
      Type 'demo()' for some demos, 'help()' for on-line help, or
      'help.start()' for an HTML browser interface to help.
      Type 'q()' to quit R.
      
      
      Execution halted
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... [0s/1s] NONE
      ‘matrixStats-methods.md.rsp’... [0s/1s] OK
  • checking re-building of vignette outputs ...* using check arguments '--no-clean-on-error '