* installing *source* package ‘matrixCorr’ ...
** this is package ‘matrixCorr’ version ‘0.12.2’
** package ‘matrixCorr’ successfully unpacked and MD5 sums checked
** using staged installation
checking for required atomic ops support...
warning: could not compile atomic probe; falling back to default detection
  not required
** libs
specified C++17
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using C++17
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c biweight_mid_corr.cpp -o biweight_mid_corr.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c bland_altman.cpp -o bland_altman.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c bland_altman_repeated.cpp -o bland_altman_repeated.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c ccc_glmm_poisson.cpp -o ccc_glmm_poisson.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c ccc_repeated.cpp -o ccc_repeated.o
In file included from bland_altman.cpp:10:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
In file included from biweight_mid_corr.cpp:13:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
In file included from bland_altman_repeated.cpp:13:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c ccc_repeated_helper.cpp -o ccc_repeated_helper.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c ccc_repeated_mixed_model.cpp -o ccc_repeated_mixed_model.o
4 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c chatterjee_xi.cpp -o chatterjee_xi.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c cia.cpp -o cia.o
4 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c cia_repeated.cpp -o cia_repeated.o
In file included from ccc_repeated_mixed_model.cpp:19:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
chatterjee_xi.cpp:446:14: warning: unused variable 'can_parallel' [-Wunused-variable]
  const bool can_parallel = tie_method == "first" && n_threads > 1;
             ^
chatterjee_xi.cpp:518:14: warning: unused variable 'can_parallel' [-Wunused-variable]
  const bool can_parallel = !return_ci && tie_method == "first" && n_threads > 1;
             ^
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c cohen_kappa.cpp -o cohen_kappa.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c concordance_corr.cpp -o concordance_corr.o
2 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c distance_correlation.cpp -o distance_correlation.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c gwet_ac.cpp -o gwet_ac.o
4 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c hsic.cpp -o hsic.o
In file included from concordance_corr.cpp:4:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c icc.cpp -o icc.o
4 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c kendall_corr.cpp -o kendall_corr.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c krippendorff_alpha.cpp -o krippendorff_alpha.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c multirater_kappa.cpp -o multirater_kappa.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c partial_correlation.cpp -o partial_correlation.o
icc.cpp:193:13: warning: unused function 'icc_pair_complete_core' [-Wunused-function]
inline bool icc_pair_complete_core(const double* x,
            ^
In file included from kendall_corr.cpp:11:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c pearson.cpp -o pearson.o
In file included from partial_correlation.cpp:9:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
partial_correlation.cpp:38:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
4 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c prob_agree.cpp -o prob_agree.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c rmcorr.cpp -o rmcorr.o
4 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c robust_correlations.cpp -o robust_correlations.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c schafer_strimmer_shrinkage_correlation.cpp -o schafer_strimmer_shrinkage_correlation.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c spearman.cpp -o spearman.o
rmcorr.cpp:422:10: warning: variable 'syy' set but not used [-Wunused-but-set-variable]
  double syy = 0.0;
         ^
In file included from robust_correlations.cpp:14:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
In file included from schafer_strimmer_shrinkage_correlation.cpp:8:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c tetrachoric.cpp -o tetrachoric.o
schafer_strimmer_shrinkage_correlation.cpp:25:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
In file included from spearman.cpp:7:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
robust_correlations.cpp:31:15: warning: unused function 'median_sorted_std' [-Wunused-function]
inline double median_sorted_std(const std::vector<double>& xs) {
              ^
robust_correlations.cpp:70:15: warning: unused function 'idealf_iqr' [-Wunused-function]
inline double idealf_iqr(const arma::vec& x) {
              ^
robust_correlations.cpp:86:15: warning: unused function 'idealf_iqr_sorted_std' [-Wunused-function]
inline double idealf_iqr_sorted_std(const std::vector<double>& y) {
              ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c validate_corr_input.cpp -o validate_corr_input.o
spearman.cpp:58:15: warning: unused function 'spearman_pair_core' [-Wunused-function]
inline double spearman_pair_core(const arma::vec& x, const arma::vec& y) {
              ^
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -include matrixCorr_r_api_compat.h -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/RcppArmadillo/include' -I/opt/R/x86_64/include    -DARMA_USE_CURRENT -fPIC  -falign-functions=64 -Wall -g -O2   -c weighted_kappa.cpp -o weighted_kappa.o
In file included from tetrachoric.cpp:12:
./matrixCorr_detail.h:539:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:580:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:622:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
./matrixCorr_detail.h:681:14: warning: unused variable 'use_omp' [-Wunused-variable]
  const bool use_omp = (p >= 64u && omp_get_max_threads() > 1);
             ^
5 warnings generated.
7 warnings generated.
4 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o matrixCorr.so RcppExports.o biweight_mid_corr.o bland_altman.o bland_altman_repeated.o ccc_glmm_poisson.o ccc_repeated.o ccc_repeated_helper.o ccc_repeated_mixed_model.o chatterjee_xi.o cia.o cia_repeated.o cohen_kappa.o concordance_corr.o distance_correlation.o gwet_ac.o hsic.o icc.o kendall_corr.o krippendorff_alpha.o multirater_kappa.o partial_correlation.o pearson.o prob_agree.o rmcorr.o robust_correlations.o schafer_strimmer_shrinkage_correlation.o spearman.o tetrachoric.o validate_corr_input.o weighted_kappa.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.6/matrixCorr.Rcheck/00LOCK-matrixCorr/00new/matrixCorr/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (matrixCorr)