Install log for 'hdtg'

* installing *source* package ‘hdtg’ ...
** this is package ‘hdtg’ version ‘0.2.1’
** package ‘hdtg’ successfully unpacked and MD5 sums checked
** using staged installation
SIMD optimizations (AVX/SSE) ENABLED during compilation.
SSE
AVX
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppXsimd/include' -I/opt/R/x86_64/include   -I. -DUSE_SSE -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -DUSE_AVX -mfma -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -mavx -mavx2 -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppHarmonic.cpp -o RcppHarmonic.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppXsimd/include' -I/opt/R/x86_64/include   -I. -DUSE_SSE -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -DUSE_AVX -mfma -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -mavx -mavx2 -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppZigZag.cpp -o RcppZigZag.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppParallel/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppXsimd/include' -I/opt/R/x86_64/include   -I. -DUSE_SSE -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -DUSE_AVX -mfma -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -mavx -mavx2 -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
In file included from RcppZigZag.cpp:10:
In file included from ./ZigZag.h:33:
In file included from ./Simd.h:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppXsimd/include/xsimd/xsimd.hpp:12:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppXsimd/include/xsimd/memory/xsimd_alignment.hpp:13:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppXsimd/include/xsimd/memory/xsimd_aligned_allocator.hpp:72:53: warning: 'allocator<void>' is deprecated [-Wdeprecated-declarations]
        pointer allocate(size_type n, typename std::allocator<void>::const_pointer hint = 0);
                                                    ^
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/memory:730:28: note: 'allocator<void>' has been explicitly marked deprecated here
class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 allocator<void>
                           ^
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/__config:1058:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/__config:1035:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from RcppZigZag.cpp:10:
In file included from ./ZigZag.h:33:
In file included from ./Simd.h:8:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppXsimd/include/xsimd/xsimd.hpp:12:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppXsimd/include/xsimd/memory/xsimd_alignment.hpp:13:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppXsimd/include/xsimd/memory/xsimd_aligned_allocator.hpp:173:27: warning: 'allocator<void>' is deprecated [-Wdeprecated-declarations]
            typename std::allocator<void>::const_pointer) -> pointer
                          ^
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/memory:730:28: note: 'allocator<void>' has been explicitly marked deprecated here
class _LIBCPP_TEMPLATE_VIS _LIBCPP_DEPRECATED_IN_CXX17 allocator<void>
                           ^
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/__config:1058:39: note: expanded from macro '_LIBCPP_DEPRECATED_IN_CXX17'
#  define _LIBCPP_DEPRECATED_IN_CXX17 _LIBCPP_DEPRECATED
                                      ^
/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/__config:1035:48: note: expanded from macro '_LIBCPP_DEPRECATED'
#    define _LIBCPP_DEPRECATED __attribute__ ((deprecated))
                                               ^
In file included from RcppHarmonic.cpp:1:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from RcppHarmonic.cpp:1:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from RcppHarmonic.cpp:1:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
                        Index replacements = 0;
                              ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
                        Index replacements = 0;
                              ^
In file included from RcppHarmonic.cpp:1:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^
5 warnings generated.
2 warnings generated.
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o hdtg.so RcppHarmonic.o RcppZigZag.o RcppExports.o -F/Library/Frameworks/R.framework/.. -framework R
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.5/hdtg.Rcheck/00LOCK-hdtg/00new/hdtg/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (hdtg)