* installing *source* package ‘duckdb’ ...
** this is package ‘duckdb’ version ‘1.5.2’
** package ‘duckdb’ successfully unpacked and MD5 sums checked
** using staged installation
++ dirname ./configure
+ cd .
+ '[' -z -j6 ']'
+ echo 'MAKEFLAGS already set to: -j6'
MAKEFLAGS already set to: -j6
++ dirname ./configure
+ cd ./src
+ echo DUCKDB_RSTRTMGR=1
+ echo DUCKDB_RSTRTMGR_LIB=
+ '[' -f '' ']'
+ cp include/to-tar.mk Makevars.duckdb
+ '[' -f duckdb.tar.xz ']'
+ command -v gtar
+ TAR=tar
+ tar xJf duckdb.tar.xz
** libs
specified C++17
Makevars:22: include/deps.mk: No such file or directory
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using C++17
Warning in system2("xcrun", "--show-sdk-version", TRUE, TRUE) :
running command ''xcrun' --show-sdk-version 2>&1' had status 1
using SDK: ‘NA’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -Iinclude -I../inst/include -DDUCKDB_DISABLE_PRINT -DDUCKDB_R_BUILD -DBROTLI_ENCODER_CLEANUP_ON_OOM -DDUCKDB_EXTENSION_AUTOLOAD_DEFAULT -DDUCKDB_RSTRTMGR=1 -Iduckdb/src/include -Iduckdb/third_party/concurrentqueue -Iduckdb/third_party/fast_float -Iduckdb/third_party/fastpforlib -Iduckdb/third_party/fmt/include -Iduckdb/third_party/fsst -Iduckdb/third_party/httplib -Iduckdb/third_party/hyperloglog -Iduckdb/third_party/jaro_winkler -Iduckdb/third_party/jaro_winkler/details -Iduckdb/third_party/libpg_query -Iduckdb/third_party/libpg_query/include -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/mbedtls/library -Iduckdb/third_party/miniz -Iduckdb/third_party/pcg -Iduckdb/third_party/pdqsort -Iduckdb/third_party/re2 -Iduckdb/third_party/ska_sort -Iduckdb/third_party/skiplist -Iduckdb/third_party/tdigest -Iduckdb/third_party/utf8proc -Iduckdb/third_party/utf8proc/include -Iduckdb/third_party/vergesort -Iduckdb/third_party/yyjson/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/parquet/include -Iduckdb/third_party/parquet -Iduckdb/third_party/thrift -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/snappy -Iduckdb/third_party/mbedtls -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/core_functions/include -I../inst/include -Iduckdb -DDUCKDB_EXTENSION_PARQUET_LINKED -DDUCKDB_BUILD_LIBRARY -DDUCKDB_EXTENSION_CORE_FUNCTIONS_LINKED -DDUCKDB_BUILD_LIBRARY -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c rfuns.cpp -o rfuns.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -Iinclude -I../inst/include -DDUCKDB_DISABLE_PRINT -DDUCKDB_R_BUILD -DBROTLI_ENCODER_CLEANUP_ON_OOM -DDUCKDB_EXTENSION_AUTOLOAD_DEFAULT -DDUCKDB_RSTRTMGR=1 -Iduckdb/src/include -Iduckdb/third_party/concurrentqueue -Iduckdb/third_party/fast_float -Iduckdb/third_party/fastpforlib -Iduckdb/third_party/fmt/include -Iduckdb/third_party/fsst -Iduckdb/third_party/httplib -Iduckdb/third_party/hyperloglog -Iduckdb/third_party/jaro_winkler -Iduckdb/third_party/jaro_winkler/details -Iduckdb/third_party/libpg_query -Iduckdb/third_party/libpg_query/include -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/mbedtls/library -Iduckdb/third_party/miniz -Iduckdb/third_party/pcg -Iduckdb/third_party/pdqsort -Iduckdb/third_party/re2 -Iduckdb/third_party/ska_sort -Iduckdb/third_party/skiplist -Iduckdb/third_party/tdigest -Iduckdb/third_party/utf8proc -Iduckdb/third_party/utf8proc/include -Iduckdb/third_party/vergesort -Iduckdb/third_party/yyjson/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/parquet/include -Iduckdb/third_party/parquet -Iduckdb/third_party/thrift -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/snappy -Iduckdb/third_party/mbedtls -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/core_functions/include -I../inst/include -Iduckdb -DDUCKDB_EXTENSION_PARQUET_LINKED -DDUCKDB_BUILD_LIBRARY -DDUCKDB_EXTENSION_CORE_FUNCTIONS_LINKED -DDUCKDB_BUILD_LIBRARY -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c database.cpp -o database.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -Iinclude -I../inst/include -DDUCKDB_DISABLE_PRINT -DDUCKDB_R_BUILD -DBROTLI_ENCODER_CLEANUP_ON_OOM -DDUCKDB_EXTENSION_AUTOLOAD_DEFAULT -DDUCKDB_RSTRTMGR=1 -Iduckdb/src/include -Iduckdb/third_party/concurrentqueue -Iduckdb/third_party/fast_float -Iduckdb/third_party/fastpforlib -Iduckdb/third_party/fmt/include -Iduckdb/third_party/fsst -Iduckdb/third_party/httplib -Iduckdb/third_party/hyperloglog -Iduckdb/third_party/jaro_winkler -Iduckdb/third_party/jaro_winkler/details -Iduckdb/third_party/libpg_query -Iduckdb/third_party/libpg_query/include -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/mbedtls/library -Iduckdb/third_party/miniz -Iduckdb/third_party/pcg -Iduckdb/third_party/pdqsort -Iduckdb/third_party/re2 -Iduckdb/third_party/ska_sort -Iduckdb/third_party/skiplist -Iduckdb/third_party/tdigest -Iduckdb/third_party/utf8proc -Iduckdb/third_party/utf8proc/include -Iduckdb/third_party/vergesort -Iduckdb/third_party/yyjson/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/parquet/include -Iduckdb/third_party/parquet -Iduckdb/third_party/thrift -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/snappy -Iduckdb/third_party/mbedtls -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/core_functions/include -I../inst/include -Iduckdb -DDUCKDB_EXTENSION_PARQUET_LINKED -DDUCKDB_BUILD_LIBRARY -DDUCKDB_EXTENSION_CORE_FUNCTIONS_LINKED -DDUCKDB_BUILD_LIBRARY -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c connection.cpp -o connection.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -Iinclude -I../inst/include -DDUCKDB_DISABLE_PRINT -DDUCKDB_R_BUILD -DBROTLI_ENCODER_CLEANUP_ON_OOM -DDUCKDB_EXTENSION_AUTOLOAD_DEFAULT -DDUCKDB_RSTRTMGR=1 -Iduckdb/src/include -Iduckdb/third_party/concurrentqueue -Iduckdb/third_party/fast_float -Iduckdb/third_party/fastpforlib -Iduckdb/third_party/fmt/include -Iduckdb/third_party/fsst -Iduckdb/third_party/httplib -Iduckdb/third_party/hyperloglog -Iduckdb/third_party/jaro_winkler -Iduckdb/third_party/jaro_winkler/details -Iduckdb/third_party/libpg_query -Iduckdb/third_party/libpg_query/include -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/mbedtls/library -Iduckdb/third_party/miniz -Iduckdb/third_party/pcg -Iduckdb/third_party/pdqsort -Iduckdb/third_party/re2 -Iduckdb/third_party/ska_sort -Iduckdb/third_party/skiplist -Iduckdb/third_party/tdigest -Iduckdb/third_party/utf8proc -Iduckdb/third_party/utf8proc/include -Iduckdb/third_party/vergesort -Iduckdb/third_party/yyjson/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/parquet/include -Iduckdb/third_party/parquet -Iduckdb/third_party/thrift -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/snappy -Iduckdb/third_party/mbedtls -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/core_functions/include -I../inst/include -Iduckdb -DDUCKDB_EXTENSION_PARQUET_LINKED -DDUCKDB_BUILD_LIBRARY -DDUCKDB_EXTENSION_CORE_FUNCTIONS_LINKED -DDUCKDB_BUILD_LIBRARY -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c statement.cpp -o statement.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -Iinclude -I../inst/include -DDUCKDB_DISABLE_PRINT -DDUCKDB_R_BUILD -DBROTLI_ENCODER_CLEANUP_ON_OOM -DDUCKDB_EXTENSION_AUTOLOAD_DEFAULT -DDUCKDB_RSTRTMGR=1 -Iduckdb/src/include -Iduckdb/third_party/concurrentqueue -Iduckdb/third_party/fast_float -Iduckdb/third_party/fastpforlib -Iduckdb/third_party/fmt/include -Iduckdb/third_party/fsst -Iduckdb/third_party/httplib -Iduckdb/third_party/hyperloglog -Iduckdb/third_party/jaro_winkler -Iduckdb/third_party/jaro_winkler/details -Iduckdb/third_party/libpg_query -Iduckdb/third_party/libpg_query/include -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/mbedtls/library -Iduckdb/third_party/miniz -Iduckdb/third_party/pcg -Iduckdb/third_party/pdqsort -Iduckdb/third_party/re2 -Iduckdb/third_party/ska_sort -Iduckdb/third_party/skiplist -Iduckdb/third_party/tdigest -Iduckdb/third_party/utf8proc -Iduckdb/third_party/utf8proc/include -Iduckdb/third_party/vergesort -Iduckdb/third_party/yyjson/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/parquet/include -Iduckdb/third_party/parquet -Iduckdb/third_party/thrift -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/snappy -Iduckdb/third_party/mbedtls -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/core_functions/include -I../inst/include -Iduckdb -DDUCKDB_EXTENSION_PARQUET_LINKED -DDUCKDB_BUILD_LIBRARY -DDUCKDB_EXTENSION_CORE_FUNCTIONS_LINKED -DDUCKDB_BUILD_LIBRARY -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c register.cpp -o register.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -Iinclude -I../inst/include -DDUCKDB_DISABLE_PRINT -DDUCKDB_R_BUILD -DBROTLI_ENCODER_CLEANUP_ON_OOM -DDUCKDB_EXTENSION_AUTOLOAD_DEFAULT -DDUCKDB_RSTRTMGR=1 -Iduckdb/src/include -Iduckdb/third_party/concurrentqueue -Iduckdb/third_party/fast_float -Iduckdb/third_party/fastpforlib -Iduckdb/third_party/fmt/include -Iduckdb/third_party/fsst -Iduckdb/third_party/httplib -Iduckdb/third_party/hyperloglog -Iduckdb/third_party/jaro_winkler -Iduckdb/third_party/jaro_winkler/details -Iduckdb/third_party/libpg_query -Iduckdb/third_party/libpg_query/include -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/mbedtls/library -Iduckdb/third_party/miniz -Iduckdb/third_party/pcg -Iduckdb/third_party/pdqsort -Iduckdb/third_party/re2 -Iduckdb/third_party/ska_sort -Iduckdb/third_party/skiplist -Iduckdb/third_party/tdigest -Iduckdb/third_party/utf8proc -Iduckdb/third_party/utf8proc/include -Iduckdb/third_party/vergesort -Iduckdb/third_party/yyjson/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/parquet/include -Iduckdb/third_party/parquet -Iduckdb/third_party/thrift -Iduckdb/third_party/lz4 -Iduckdb/third_party/brotli/include -Iduckdb/third_party/brotli/common -Iduckdb/third_party/brotli/dec -Iduckdb/third_party/brotli/enc -Iduckdb/third_party/snappy -Iduckdb/third_party/mbedtls -Iduckdb/third_party/mbedtls/include -Iduckdb/third_party/zstd/include -Iduckdb/extension/core_functions/include -I../inst/include -Iduckdb -DDUCKDB_EXTENSION_PARQUET_LINKED -DDUCKDB_BUILD_LIBRARY -DDUCKDB_EXTENSION_CORE_FUNCTIONS_LINKED -DDUCKDB_BUILD_LIBRARY -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c relational.cpp -o relational.o
In file included from register.cpp:8:
In file included from include/rapi.hpp:7:
In file included from ../inst/include/cpp11.hpp:13:
../inst/include/cpp11/function.hpp:72:12: error: use of undeclared identifier 'R_getRegisteredNamespace'
return R_getRegisteredNamespace(name);
^
In file included from connection.cpp:3:
In file included from include/r_progress_bar_display.hpp:3:
In file included from include/rapi.hpp:7:
In file included from ../inst/include/cpp11.hpp:13:
../inst/include/cpp11/function.hpp:72:12: error: use of undeclared identifier 'R_getRegisteredNamespace'
return R_getRegisteredNamespace(name);
^
In file included from database.cpp:7:
In file included from include/rapi.hpp:7:
In file included from ../inst/include/cpp11.hpp:13:
../inst/include/cpp11/function.hpp:72:12: error: use of undeclared identifier 'R_getRegisteredNamespace'
return R_getRegisteredNamespace(name);
^
In file included from relational.cpp:20:
In file included from include/rapi.hpp:7:
In file included from ../inst/include/cpp11.hpp:13:
../inst/include/cpp11/function.hpp:72:12: error: use of undeclared identifier 'R_getRegisteredNamespace'
return R_getRegisteredNamespace(name);
^
In file included from statement.cpp:10:
In file included from include/rapi.hpp:7:
In file included from ../inst/include/cpp11.hpp:13:
../inst/include/cpp11/function.hpp:72:12: error: use of undeclared identifier 'R_getRegisteredNamespace'
return R_getRegisteredNamespace(name);
^
1 error generated.
1 error generated.
make: *** [database.o] Error 1
make: *** Waiting for unfinished jobs....
make: *** [connection.o] Error 1
1 error generated.
make: *** [register.o] Error 1
1 error generated.
make: *** [relational.o] Error 1
1 error generated.
make: *** [statement.o] Error 1
ERROR: compilation failed for package ‘duckdb’
* removing ‘/Volumes/Builds/packages/big-sur-x86_64/results/4.6/duckdb.Rcheck/duckdb’