• using R Under development (unstable) (2025-01-24 r87627)
  • using platform: x86_64-apple-darwin20
  • R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 14.2.0
  • running under: macOS Ventura 13.3.1
  • using session charset: UTF-8
  • checking for file ‘depigner/DESCRIPTION’ ... OK
  • this is package ‘depigner’ version ‘0.9.1’
  • package encoding: UTF-8
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘depigner’ can be installed ... [3s/4s] OK See the install log for details.
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking code files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... [1s/1s] OK
  • checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
  • checking whether the package can be unloaded cleanly ... [0s/1s] OK
  • checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
  • checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
  • checking loading without being on the library search path ... [1s/1s] OK
  • checking whether startup messages can be suppressed ... [1s/1s] OK
  • checking dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [3s/3s] OK
  • checking Rd files ... [0s/0s] NOTE checkRd: (-1) install_pkg_set.Rd:24: Lost braces; missing escapes or markup?     24 | can use some sets already prepared and included into `{depigner}`        | ^ checkRd: (-1) pkg_sets.Rd:65: Lost braces; missing escapes or markup?     65 | the sets (that is the reason why, e.g., you do not see `{shiny}` or        | ^ checkRd: (-1) pkg_sets.Rd:71: Lost braces; missing escapes or markup?     71 | `{beepr}`, `{fortunes}`, and `{telegram.bot}`.        | ^ checkRd: (-1) pkg_sets.Rd:71: Lost braces; missing escapes or markup?     71 | `{beepr}`, `{fortunes}`, and `{telegram.bot}`.        | ^ checkRd: (-1) pkg_sets.Rd:71: Lost braces; missing escapes or markup?     71 | `{beepr}`, `{fortunes}`, and `{telegram.bot}`.        | ^ checkRd: (-1) pkg_sets.Rd:73: Lost braces; missing escapes or markup?     73 | \item \code{pkg_utils}: Utilities for data analyses, including `{here}`,        | ^ checkRd: (-1) pkg_sets.Rd:74: Lost braces; missing escapes or markup?     74 | `{lobstr}`, `{progress}`, `{progressr}`, `{readxl}`, `{tidyverse}`,        | ^ checkRd: (-1) pkg_sets.Rd:74: Lost braces; missing escapes or markup?     74 | `{lobstr}`, `{progress}`, `{progressr}`, `{readxl}`, `{tidyverse}`,        | ^ checkRd: (-1) pkg_sets.Rd:74: Lost braces; missing escapes or markup?     74 | `{lobstr}`, `{progress}`, `{progressr}`, `{readxl}`, `{tidyverse}`,        | ^ checkRd: (-1) pkg_sets.Rd:74: Lost braces; missing escapes or markup?     74 | `{lobstr}`, `{progress}`, `{progressr}`, `{readxl}`, `{tidyverse}`,        | ^ checkRd: (-1) pkg_sets.Rd:74: Lost braces; missing escapes or markup?     74 | `{lobstr}`, `{progress}`, `{progressr}`, `{readxl}`, `{tidyverse}`,        | ^ checkRd: (-1) pkg_sets.Rd:75: Lost braces; missing escapes or markup?     75 | and `{writexl}`.        | ^ checkRd: (-1) pkg_sets.Rd:77: Lost braces; missing escapes or markup?     77 | \item \code{pkg_speed}: Are you in a hurry?! This includes `{furrr}`,        | ^ checkRd: (-1) pkg_sets.Rd:78: Lost braces; missing escapes or markup?     78 | `{parallel}`, `snow`, and `{tidyfast}`.        | ^ checkRd: (-1) pkg_sets.Rd:78: Lost braces; missing escapes or markup?     78 | `{parallel}`, `snow`, and `{tidyfast}`.        | ^ checkRd: (-1) pkg_sets.Rd:81: Lost braces; missing escapes or markup?     81 | `{keras}` nor `{tensorflow}` which require _ad hoc_ configuration).        | ^ checkRd: (-1) pkg_sets.Rd:81: Lost braces; missing escapes or markup?     81 | `{keras}` nor `{tensorflow}` which require _ad hoc_ configuration).        | ^ checkRd: (-1) pkg_sets.Rd:82: Lost braces; missing escapes or markup?     82 | This includes `{caret}`, `{glmnet}`, `{mlr3}`, `{snow}`,        | ^ checkRd: (-1) pkg_sets.Rd:82: Lost braces; missing escapes or markup?     82 | This includes `{caret}`, `{glmnet}`, `{mlr3}`, `{snow}`,        | ^ checkRd: (-1) pkg_sets.Rd:82: Lost braces; missing escapes or markup?     82 | This includes `{caret}`, `{glmnet}`, `{mlr3}`, `{snow}`,        | ^ checkRd: (-1) pkg_sets.Rd:82: Lost braces; missing escapes or markup?     82 | This includes `{caret}`, `{glmnet}`, `{mlr3}`, `{snow}`,        | ^ checkRd: (-1) pkg_sets.Rd:83: Lost braces; missing escapes or markup?     83 | `{tidymodels}`, `{tidytext}`, and `{tm}`.        | ^ checkRd: (-1) pkg_sets.Rd:83: Lost braces; missing escapes or markup?     83 | `{tidymodels}`, `{tidytext}`, and `{tm}`.        | ^ checkRd: (-1) pkg_sets.Rd:83: Lost braces; missing escapes or markup?     83 | `{tidymodels}`, `{tidytext}`, and `{tm}`.        | ^ checkRd: (-1) pkg_sets.Rd:86: Lost braces; missing escapes or markup?     86 | This includes `{CBPS}`, `{cobalt}`, `{dlnm}`, `{ggeffects}`,        | ^ checkRd: (-1) pkg_sets.Rd:86: Lost braces; missing escapes or markup?     86 | This includes `{CBPS}`, `{cobalt}`, `{dlnm}`, `{ggeffects}`,        | ^ checkRd: (-1) pkg_sets.Rd:86: Lost braces; missing escapes or markup?     86 | This includes `{CBPS}`, `{cobalt}`, `{dlnm}`, `{ggeffects}`,        | ^ checkRd: (-1) pkg_sets.Rd:86: Lost braces; missing escapes or markup?     86 | This includes `{CBPS}`, `{cobalt}`, `{dlnm}`, `{ggeffects}`,        | ^ checkRd: (-1) pkg_sets.Rd:87: Lost braces; missing escapes or markup?     87 | `{MatchIt}`, `{mice}`, `{rms}`, `{twang}`, and `{WeightIt}`.        | ^ checkRd: (-1) pkg_sets.Rd:87: Lost braces; missing escapes or markup?     87 | `{MatchIt}`, `{mice}`, `{rms}`, `{twang}`, and `{WeightIt}`.        | ^ checkRd: (-1) pkg_sets.Rd:87: Lost braces; missing escapes or markup?     87 | `{MatchIt}`, `{mice}`, `{rms}`, `{twang}`, and `{WeightIt}`.        | ^ checkRd: (-1) pkg_sets.Rd:87: Lost braces; missing escapes or markup?     87 | `{MatchIt}`, `{mice}`, `{rms}`, `{twang}`, and `{WeightIt}`.        | ^ checkRd: (-1) pkg_sets.Rd:87: Lost braces; missing escapes or markup?     87 | `{MatchIt}`, `{mice}`, `{rms}`, `{twang}`, and `{WeightIt}`.        | ^ checkRd: (-1) pkg_sets.Rd:91: Lost braces; missing escapes or markup?     91 | into `pkg_all`). This includes `{rstanarm}`, and `{brms}`.        | ^ checkRd: (-1) pkg_sets.Rd:91: Lost braces; missing escapes or markup?     91 | into `pkg_all`). This includes `{rstanarm}`, and `{brms}`.        | ^ checkRd: (-1) pkg_sets.Rd:93: Lost braces; missing escapes or markup?     93 | \item \code{pkg_devel}: Develop stuff in R. This includes `{assertive}`,        | ^ checkRd: (-1) pkg_sets.Rd:94: Lost braces; missing escapes or markup?     94 | `{checkmate}`, `{covr}`, `{lintr}`, `{profvis}`, `{pryr}`,        | ^ checkRd: (-1) pkg_sets.Rd:94: Lost braces; missing escapes or markup?     94 | `{checkmate}`, `{covr}`, `{lintr}`, `{profvis}`, `{pryr}`,        | ^ checkRd: (-1) pkg_sets.Rd:94: Lost braces; missing escapes or markup?     94 | `{checkmate}`, `{covr}`, `{lintr}`, `{profvis}`, `{pryr}`,        | ^ checkRd: (-1) pkg_sets.Rd:94: Lost braces; missing escapes or markup?     94 | `{checkmate}`, `{covr}`, `{lintr}`, `{profvis}`, `{pryr}`,        | ^ checkRd: (-1) pkg_sets.Rd:94: Lost braces; missing escapes or markup?     94 | `{checkmate}`, `{covr}`, `{lintr}`, `{profvis}`, `{pryr}`,        | ^ checkRd: (-1) pkg_sets.Rd:95: Lost braces; missing escapes or markup?     95 | `{renv}`, `{roxygen2}`, `{styler}`, `{tarchetypes}`, `{testthat}`,        | ^ checkRd: (-1) pkg_sets.Rd:95: Lost braces; missing escapes or markup?     95 | `{renv}`, `{roxygen2}`, `{styler}`, `{tarchetypes}`, `{testthat}`,        | ^ checkRd: (-1) pkg_sets.Rd:95: Lost braces; missing escapes or markup?     95 | `{renv}`, `{roxygen2}`, `{styler}`, `{tarchetypes}`, `{testthat}`,        | ^ checkRd: (-1) pkg_sets.Rd:95: Lost braces; missing escapes or markup?     95 | `{renv}`, `{roxygen2}`, `{styler}`, `{tarchetypes}`, `{testthat}`,        | ^ checkRd: (-1) pkg_sets.Rd:95: Lost braces; missing escapes or markup?     95 | `{renv}`, `{roxygen2}`, `{styler}`, `{tarchetypes}`, `{testthat}`,        | ^ checkRd: (-1) pkg_sets.Rd:96: Lost braces; missing escapes or markup?     96 | `{spelling}`, and `{usethis}`.        | ^ checkRd: (-1) pkg_sets.Rd:96: Lost braces; missing escapes or markup?     96 | `{spelling}`, and `{usethis}`.        | ^ checkRd: (-1) pkg_sets.Rd:99: Lost braces; missing escapes or markup?     99 | `{blogdown}`, `{DT}`, `{pander}`, and `{pkgdown}`.        | ^ checkRd: (-1) pkg_sets.Rd:99: Lost braces; missing escapes or markup?     99 | `{blogdown}`, `{DT}`, `{pander}`, and `{pkgdown}`.        | ^ checkRd: (-1) pkg_sets.Rd:99: Lost braces; missing escapes or markup?     99 | `{blogdown}`, `{DT}`, `{pander}`, and `{pkgdown}`.        | ^ checkRd: (-1) pkg_sets.Rd:99: Lost braces; missing escapes or markup?     99 | `{blogdown}`, `{DT}`, `{pander}`, and `{pkgdown}`.        | ^ checkRd: (-1) pkg_sets.Rd:102: Lost braces; missing escapes or markup?    102 | (`{shiny}` app included). This includes `{golem}`, `{docopt}`,        | ^ checkRd: (-1) pkg_sets.Rd:102: Lost braces; missing escapes or markup?    102 | (`{shiny}` app included). This includes `{golem}`, `{docopt}`,        | ^ checkRd: (-1) pkg_sets.Rd:102: Lost braces; missing escapes or markup?    102 | (`{shiny}` app included). This includes `{golem}`, `{docopt}`,        | ^ checkRd: (-1) pkg_sets.Rd:103: Lost braces; missing escapes or markup?    103 | `{plumbr}`, and `{shinyjs}`.        | ^ checkRd: (-1) pkg_sets.Rd:103: Lost braces; missing escapes or markup?    103 | `{plumbr}`, and `{shinyjs}`.        | ^ checkRd: (-1) tidy_summary.Rd:29: Lost braces; missing escapes or markup?     29 | `{pander}`ed (e.g. printed on a word document after        | ^ checkRd: (-1) tidy_summary.Rd:30: Lost braces; missing escapes or markup?     30 | \code{knit}ting the source (with `{knitr}`).        | ^
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... [0s/0s] OK
  • checking LazyData ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking examples ... [1s/1s] OK
  • checking for unstated dependencies in ‘tests’ ... OK
  • checking tests ... [7s/10s] OK   Running ‘spelling.R’ [0s/0s]   Running ‘testthat.R’ [7s/10s]
  • checking PDF version of manual ... [6s/8s] OK
  • DONE Status: 1 NOTE
  • using check arguments '--no-clean-on-error '