• using R version 4.6.0 (2026-04-24)
  • using platform: x86_64-apple-darwin20
  • R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 14.2.0
  • running under: macOS Ventura 13.3.1
  • using session charset: UTF-8 * current time: 2026-04-26 15:22:59 UTC
  • checking for file ‘countSTAR/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘countSTAR’ version ‘1.2.0’
  • package encoding: UTF-8
  • checking package namespace information ... OK
  • checking package dependencies ... INFO Package suggested but not available for checking: ‘dbarts’
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘countSTAR’ can be installed ... [17s/18s] OK See the install log for details.
  • used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
  • used SDK: ‘MacOSX11.3.1.sdk’
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking ‘build’ directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking code files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... [0s/0s] OK
  • checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
  • checking whether the package can be unloaded cleanly ... [0s/0s] OK
  • checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
  • checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
  • checking loading without being on the library search path ... [0s/0s] OK
  • checking dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [9s/12s] OK
  • checking Rd files ... [1s/1s] OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... [0s/0s] OK
  • checking LazyData ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking compiled code ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking files in ‘vignettes’ ... OK
  • checking examples ... [8s/13s] OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes ... OK
  • checking re-building of vignette outputs ... [21s/32s] ERROR Error(s) in re-building vignettes: --- re-building ‘countSTAR.Rmd’ using rmarkdown Quitting from countSTAR.Rmd:251-254 [bart] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! Package "dbarts" must be installed to use this function. --- Backtrace:     ▆  1. └─countSTAR::bart_star(y = y, X = X, transformation = "np") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'countSTAR.Rmd' failed with diagnostics: Package "dbarts" must be installed to use this function. --- failed re-building ‘countSTAR.Rmd’ SUMMARY: processing the following file failed:   ‘countSTAR.Rmd’ Error: Vignette re-building failed. Execution halted
  • checking PDF version of manual ... [9s/12s] OK
  • DONE Status: 1 ERROR
  • using check arguments '--no-clean-on-error '