Check results for 'commons'

using R version 4.6.1 (2026-06-24)
using platform: x86_64-apple-darwin20
R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 14.2.0
running under: macOS Ventura 13.3.1
using session charset: UTF-8 * current time: 2026-09-17 14:12:33 UTC
checking for file ‘commons/DESCRIPTION’ ... OK
this is package ‘commons’ version ‘0.1.0’
package encoding: UTF-8
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking whether package ‘commons’ can be installed ... [13s/18s] OK See the install log for details.
used C compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
used SDK: ‘MacOSX11.3.1.sdk’
checking installed package size ... OK
checking package directory ... OK
checking ‘build’ directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking code files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... [1s/1s] OK
checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
checking whether the package can be unloaded cleanly ... [0s/1s] OK
checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
checking loading without being on the library search path ... [1s/1s] OK
checking whether startup messages can be suppressed ... [1s/1s] OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [17s/25s] OK
checking Rd files ... [0s/0s] OK
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking line endings in C/C++/Fortran sources/headers ... OK
checking compiled code ... OK
checking installed files from ‘inst/doc’ ... OK
checking files in ‘vignettes’ ... OK
checking examples ... [1s/2s] OK
checking for unstated dependencies in ‘tests’ ... OK
checking tests ... [339s/253s] ERROR Running ‘testthat.R’ [339s/253s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(commons) > > test_check("commons") Starting 2 test processes. > test-trajectory-review.R: Loading required package: shiny Saving _problems/test-sandbox-251.R Saving _problems/test-sandbox-287.R Saving _problems/test-run-r-29.R Saving _problems/test-run-r-46.R Saving _problems/test-run-r-47.R Saving _problems/test-run-r-64.R Saving _problems/test-run-r-111.R Saving _problems/test-run-r-125.R Saving _problems/test-run-r-126.R Saving _problems/test-run-r-163.R Saving _problems/test-run-r-195.R Saving _problems/test-run-r-198.R Saving _problems/test-run-r-208.R Saving _problems/test-run-r-219.R Saving _problems/test-run-r-221.R Saving _problems/test-run-r-232.R Saving _problems/test-run-r-245.R Saving _problems/test-run-r-281.R Saving _problems/test-run-r-291.R Saving _problems/test-run-r-294.R Saving _problems/test-run-r-304.R Saving _problems/test-run-r-308.R Saving _problems/test-run-r-319.R [ FAIL 23 | WARN 0 | SKIP 86 | PASS 7189 ] ══ Skipped tests (86) ══════════════════════════════════════════════════════════ • COMMONS_TEST_CONNECT_VANITY_URL is not set (1): 'test-trajectories.R:1524:3' • On CRAN (60): 'test-citation-browser.R:11:3', 'test-citation-browser.R:181:3', 'test-citation-browser.R:340:3', 'test-commons.R:162:1', 'test-commons.R:380:1', 'test-commons.R:602:3', 'test-commons.R:630:3', 'test-commons.R:678:3', 'test-commons.R:694:3', 'test-commons.R:763:5', 'test-data-source.R:20:1', 'test-data-source.R:81:1', 'test-data-source.R:249:1', 'test-data-source.R:259:1', 'test-data-source.R:275:1', 'test-data-source.R:294:1', 'test-data-source.R:325:1', 'test-data-source.R:411:1', 'test-data-source.R:488:1', 'test-data-source.R:499:1', 'test-trajectory-review.R:265:1', 'test-catalog-databricks.R:446:1', 'test-catalog-databricks.R:453:1', 'test-catalog-snowflake.R:520:1', 'test-chat.R:93:1', 'test-chat.R:100:1', 'test-connect.R:11:1', 'test-connect.R:71:1', 'test-connect.R:192:1', 'test-connect.R:232:1', 'test-data-dictionary.R:85:1', 'test-data-dictionary.R:113:1', 'test-data-dictionary.R:311:1', 'test-layer-objects.R:61:1', 'test-measures.R:20:1', 'test-measures.R:42:1', 'test-measures.R:79:1', 'test-measures.R:86:1', 'test-measures.R:93:1', 'test-read-measures.R:390:1', 'test-tools.R:413:1', 'test-tracing.R:1:1', 'test-tracing.R:20:1', 'test-tracing.R:25:1', 'test-tracing.R:32:3', 'test-tracing.R:76:1', 'test-tracing.R:105:1', 'test-tracing.R:120:1', 'test-tracing.R:147:1', 'test-tracing.R:183:1', 'test-tracing.R:231:1', 'test-tracing.R:282:3', 'test-trajectories.R:1064:1', 'test-trajectories.R:1077:1', 'test-trajectories.R:1161:1', 'test-trajectories.R:1191:3', 'test-trajectories.R:1407:1', 'test-trajectories.R:1461:1', 'test-trajectories.R:1536:1', 'test-trajectory-review-log.R:63:1' • On Mac (1): 'test-sandbox.R:69:3' • Set options(commons.test.databricks = DBI::Id(...)) to run live warehouse tests (7): 'test-live-warehouses.R:406:3', 'test-live-warehouses.R:488:3', 'test-live-warehouses.R:519:3', 'test-live-warehouses.R:559:3', 'test-live-warehouses.R:632:3', 'test-live-warehouses.R:660:3', 'test-live-warehouses.R:743:3' • Set options(commons.test.databricks.denied_table = DBI::Id(...)) (1): 'test-live-warehouses.R:508:3' • Set options(commons.test.databricks.parameterized_model = DBI::Id(...)) (1): 'test-live-warehouses.R:613:3' • Set options(commons.test.snowflake = DBI::Id(...)) to run live warehouse tests (7): 'test-live-warehouses.R:2:3', 'test-live-warehouses.R:100:3', 'test-live-warehouses.R:123:3', 'test-live-warehouses.R:159:3', 'test-live-warehouses.R:199:3', 'test-live-warehouses.R:282:3', 'test-live-warehouses.R:356:3' • Set options(commons.test.snowflake.denied_table = DBI::Id(...)) (1): 'test-live-warehouses.R:148:3' • Set options(commons.test.snowflake.parameterized_model = DBI::Id(...)) (1): 'test-live-warehouses.R:320:3' • Set options(commons.test.snowflake.semantic_view = DBI::Id(...)) to run this test (1): 'test-live-warehouses.R:286:3' • Set options(commons.test.snowflake.verified_query_view = DBI::Id(...)) (1): 'test-live-warehouses.R:339:3' • data-dict CLI is not installed (2): 'test-definition-export.R:148:5', 'test-definition-export.R:172:5' • identical(Sys.info()[["sysname"]], "Linux") is not TRUE (1): 'test-sandbox.R:264:3' • not a source checkout (1): 'test-assets-synced.R:6:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-sandbox.R:251:3'): an initialized worker is denied reads, writes, and sockets ── <callr_status_error/callr_error/rlib_error_3_0/rlib_error/error/condition> Error: ! in callr subprocess. Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: ! sandbox_init failed: compilation failed Backtrace: ▆ 1. └─commons (local) sandboxed_worker_probes("auto") at test-sandbox.R:251:3 2. └─rs$run(...) at test-sandbox.R:158:3 3. └─callr:::rs_run(self, private, func, args, package) 4. └─throw(res$error) ── Error ('test-sandbox.R:287:3'): full network access leaves the filesystem sandboxed ── <callr_status_error/callr_error/rlib_error_3_0/rlib_error/error/condition> Error: ! in callr subprocess. Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: ! sandbox_init failed: compilation failed Backtrace: ▆ 1. └─commons (local) sandboxed_worker_probes("auto", network = "full") at test-sandbox.R:287:3 2. └─rs$run(...) at test-sandbox.R:158:3 3. └─callr:::rs_run(self, private, func, args, package) 4. └─throw(res$error) ── Failure ('test-run-r.R:29:3'): run_r executes code against stored handles ─── Expected `res@value` to match regexp "5650". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:42:3'): run_r executes code against stored handles ─── Expected `res@extra$display$html` to match string "#> [1] 5650". Actual text: x | <div class="commons-run-r-display"><pre class="commons-run-r-code"><code class="language-r">sum(r1$revenue) | #> ! in callr subprocess. | #> Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | #> ! sandbox_init failed: compilation failed</code></pre></div> ── Failure ('test-run-r.R:47:3'): run_r executes code against stored handles ─── Expected `res@extra$display$html` to match string "#> [1] 5650". Actual text: x | <div class="commons-run-r-display"><pre class="commons-run-r-code"><code class="language-r">sum(r1$revenue) | #> ! in callr subprocess. | #> Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | #> ! sandbox_init failed: compilation failed</code></pre></div> ── Failure ('test-run-r.R:64:3'): run_r session state persists across calls, and handles sync lazily ── Expected `res@value` to match regexp "48". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:111:3'): run_r loads integer64 methods for stored handles ── Expected `res@value` to match string "[1] 326 338". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:125:3'): run_r returns plots as images and opens the display ── Expected `images` to have length 1. Actual length: 0. ── Error ('test-run-r.R:126:3'): run_r returns plots as images and opens the display ── <subscriptOutOfBoundsError/error/condition> Error in `images[[1]]`: subscript out of bounds Backtrace: ▆ 1. └─testthat::expect_identical(images[[1]]@type, "image/png") at test-run-r.R:126:3 2. └─testthat::quasi_label(enquo(object), label) 3. └─rlang::eval_bare(expr, quo_get_env(quo)) ── Error ('test-run-r.R:163:3'): run_r collapses code and output above plots ─── Error in `res@value[[1]]@text`: no applicable method for `@` applied to an object of class "character" Backtrace: ▆ 1. └─testthat::expect_match(res@value[[1]]@text, "private text") at test-run-r.R:163:3 2. └─testthat::quasi_label(enquo(object), label) 3. └─rlang::eval_bare(expr, quo_get_env(quo)) ── Failure ('test-run-r.R:195:3'): run_r preloads measure sources for reading, comments included ── Expected `res@value` to match string "# count every order". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:198:3'): run_r preloads measure sources for reading, comments included ── Expected `called@value` to match regexp "6". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:208:3'): run_r delivers the citation request when no fallback tool has ── Expected `res@value` to match string "[1] 2". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed | | With this most recent tool call, this turn is now based on outputs beyond trusted calculations. If trusted text you have seen supports your final answer, add a `<commons-citation>` block with one blockquote of the exact supporting text, following the citation rules given earlier. Otherwise, provide no citations. ── Failure ('test-run-r.R:219:3'): run_r surfaces errors from model code without failing the tool ── Expected `res@value` to match regexp "Error: boom". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:221:3'): run_r surfaces errors from model code without failing the tool ── Expected `res@extra$display$html` to match string "#> boom". Actual text: x | <div class="commons-run-r-display"><pre class="commons-run-r-code"><code class="language-r">stop('boom') | #> ! in callr subprocess. | #> Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | #> ! sandbox_init failed: compilation failed</code></pre></div> ── Failure ('test-run-r.R:232:3'): run_r displays code directly when it produces no output ── Expected `res@value` to match string "produced no output". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:245:3'): run_r displays code directly when it produces no output ── Expected `res@extra$display$html` not to match string "#>". Actual text: x | <div class="commons-run-r-display"><pre class="commons-run-r-code"><code class="language-r">x <- 1 | #> ! in callr subprocess. | #> Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | #> ! sandbox_init failed: compilation failed</code></pre></div> ── Failure ('test-run-r.R:281:3'): the worker cannot see parent-only environment variables ── Expected `res@value` to match regexp "FALSE". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:291:3'): run_r interrupts code exceeding the time limit, keeping the session ── Expected `res@value` to match regexp "time limit". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:294:3'): run_r interrupts code exceeding the time limit, keeping the session ── Expected `after@value` to match regexp "1". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:304:3'): a crashed worker reports the crash and respawns on the next call ── Expected `res@value` to match regexp "crashed". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:308:3'): a crashed worker reports the crash and respawns on the next call ── Expected `after@value` to match regexp "6". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed ── Failure ('test-run-r.R:319:3'): concurrent run_r calls take turns on the worker ── Expected `res[[2]]@value` to match regexp "20". Actual text: x | Error: ! in callr subprocess. | Caused by error in `(function (parent_tmp, work_dir, dll_path, network = "none", ...`: | ! sandbox_init failed: compilation failed [ FAIL 23 | WARN 0 | SKIP 86 | PASS 7189 ] Error: ! Test failures. Execution halted
checking for unstated dependencies in vignettes ... OK
checking package vignettes ... OK
checking re-building of vignette outputs ... [13s/14s] OK
checking PDF version of manual ... [7s/7s] OK
DONE

Status: 1 ERROR