• using R version 4.6.1 (2026-06-24)
• using platform: x86_64-apple-darwin20
• R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 14.2.0
• running under: macOS Ventura 13.3.1
• using session charset: UTF-8 * current time: 2026-09-25 22:49:03 UTC
• checking for file ‘birp/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘birp’ version ‘0.9.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘birp’ can be installed ... [304s/270s] WARNING Found the following significant warnings:   warning: unknown warning option '-Winvalid-utf8'; did you mean '-Winvalid-iboutlet'? [-Wunknown-warning-option]   ld: warning: object file (birp_cpp/libarmadillo.a(wrapper1.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libarmadillo.a(wrapper2.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TDAGBuilder.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TMCMCUserInterface.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TDistancesBinned.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TMCMC.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TPositionsRaw.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libbirpLib.a(TBirpConfiguration.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TBernoulliDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TBetaDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TMCMCFiles.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TBinomialDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TChiDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TChisqDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TStandardError.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TDirichletDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TExponentialDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TDefinition.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TGammaDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TPriorMultivariateNormal.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TPriorMultivariateNormalMixedModel.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TGammaModeDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libbirpLib.a(TBirpCore.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TLogHCalculatorBlocks.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TMultivariateNormalDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TLogHCalculatorRegular.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TLogHCorrelation.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TNegativeBinomialDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TMultiLogHCalculatorBlocks.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TNormalDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TTotalLogH.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(TUpdateWeights.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TParetoDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libstattools.a(commonTestingFunctions.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TPoissonDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TUniformDistr.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libbirpLib.a(TBirpPrior.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TLineWriter.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libbirpLib.a(TBirpTask.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TReader.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TWriter.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libbirpLib.a(TData.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TTest.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TTestList.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TTesting.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TLog.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libbirpLib.a(TDistributions.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TMain.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TOutput.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TParameters.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TRandomGenerator.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libbirpLib.a(TGamma.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TRandomPicker.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TTask.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TTaskList.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(globalConstants.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(progressTools.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TAccept.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TAcceptOddsRation.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TSubsamplePicker.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libbirpLib.a(TModels.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(mathFunctions.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TDataFileBase.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TDataFileNames.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TNamesEmpty.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TNamesIndices.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TNamesIndicesLowerCase.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TNamesIndicesUpperCase.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TNamesPositions.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TNamesStrings.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(repeatString.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(stringConversions.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(stringManipulations.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(TTimer.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0)   ld: warning: object file (birp_cpp/libcoretools.a(PhredTables.cpp.o)) was built for newer macOS version (13.7) than being linked (11.0) See the install log for details.
• used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
• used SDK: ‘MacOSX11.3.1.sdk’
• checking installed package size ... INFO   installed size is 32.0Mb   sub-directories of 1Mb or more:     libs 31.2Mb
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the package can be unloaded cleanly ... [0s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [3s/12s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in shell scripts ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [11s/26s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [126s/301s] OK
• checking PDF version of manual ... [7s/11s] OK
• DONE

Status: 1 WARNING