* installing *source* package ‘bayestransmission’ ...
** this is package ‘bayestransmission’ version ‘0.1.0’
** package ‘bayestransmission’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using C++17
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c CodeToEvent.cpp -o CodeToEvent.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_AbxCoding.cpp -o infect/infect_AbxCoding.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_AbxLocationState.cpp -o infect/infect_AbxLocationState.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_AbxPatientState.cpp -o infect/infect_AbxPatientState.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_CountLocationState.cpp -o infect/infect_CountLocationState.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_Episode.cpp -o infect/infect_Episode.o
In file included from infect/infect_Episode.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from CodeToEvent.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_AbxLocationState.cpp:2:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_AbxPatientState.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_CountLocationState.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_AbxCoding.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_EpisodeHistory.cpp -o infect/infect_EpisodeHistory.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_Event.cpp -o infect/infect_Event.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_Facility.cpp -o infect/infect_Facility.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_HistoryLink.cpp -o infect/infect_HistoryLink.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_LocationState.cpp -o infect/infect_LocationState.o
In file included from infect/infect_Event.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_EpisodeHistory.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_Facility.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_HistoryLink.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_Model.cpp -o infect/infect_Model.o
In file included from infect/infect_LocationState.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_Patient.cpp -o infect/infect_Patient.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_PatientState.cpp -o infect/infect_PatientState.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_RawEvent.cpp -o infect/infect_RawEvent.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_Sampler.cpp -o infect/infect_Sampler.o
In file included from infect/infect_Model.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_Patient.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_RawEvent.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_PatientState.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_SetLocationState.cpp -o infect/infect_SetLocationState.o
In file included from infect/infect_Sampler.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_State.cpp -o infect/infect_State.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_System.cpp -o infect/infect_System.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_SystemEpisodeHistory.cpp -o infect/infect_SystemEpisodeHistory.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_SystemHistory.cpp -o infect/infect_SystemHistory.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c infect/infect_UnitEpisodeHistory.cpp -o infect/infect_UnitEpisodeHistory.o
In file included from infect/infect_SetLocationState.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_State.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_System.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_SystemEpisodeHistory.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c lognormal/lognormal_LinearAbxICP2.cpp -o lognormal/lognormal_LinearAbxICP2.o
In file included from infect/infect_SystemHistory.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from infect/infect_UnitEpisodeHistory.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c lognormal/lognormal_LinearAbxICP.cpp -o lognormal/lognormal_LinearAbxICP.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c lognormal/lognormal_LinearAbxModel2.cpp -o lognormal/lognormal_LinearAbxModel2.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c lognormal/lognormal_LinearAbxModel.cpp -o lognormal/lognormal_LinearAbxModel.o
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c lognormal/lognormal_LogNormalAbxICP.cpp -o lognormal/lognormal_LogNormalAbxICP.o
In file included from lognormal/lognormal_LinearAbxICP2.cpp:1:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from lognormal/lognormal_LinearAbxICP2.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LinearAbxICP2.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from lognormal/lognormal_LinearAbxICP2.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LinearAbxICP2.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from lognormal/lognormal_LinearAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from lognormal/lognormal_LinearAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LinearAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from lognormal/lognormal_LinearAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LinearAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from lognormal/lognormal_LinearAbxModel2.cpp:1:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from lognormal/lognormal_LinearAbxModel.cpp:1:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from lognormal/lognormal_LinearAbxModel.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LinearAbxModel.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from lognormal/lognormal_LinearAbxModel.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LinearAbxModel.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from lognormal/lognormal_LinearAbxModel2.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LinearAbxModel2.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from lognormal/lognormal_LinearAbxModel2.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LinearAbxModel2.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c lognormal/lognormal_LogNormalICP.cpp -o lognormal/lognormal_LogNormalICP.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c lognormal/lognormal_LogNormalMassAct.cpp -o lognormal/lognormal_LogNormalMassAct.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c lognormal/lognormal_LogNormalModel.cpp -o lognormal/lognormal_LogNormalModel.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c lognormal/lognormal_MixedICP.cpp -o lognormal/lognormal_MixedICP.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c lognormal/lognormal_MultiUnitAbxICP.cpp -o lognormal/lognormal_MultiUnitAbxICP.o
In file included from lognormal/lognormal_LogNormalAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from lognormal/lognormal_LogNormalAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LogNormalAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from lognormal/lognormal_LogNormalAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LogNormalAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c Markov.cpp -o Markov.o
In file included from lognormal/lognormal_LogNormalICP.cpp:1:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from lognormal/lognormal_LogNormalICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LogNormalICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from lognormal/lognormal_LogNormalICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LogNormalICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from lognormal/lognormal_LogNormalModel.cpp:1:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from lognormal/lognormal_LogNormalMassAct.cpp:1:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from lognormal/lognormal_MixedICP.cpp:1:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from lognormal/lognormal_LogNormalMassAct.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LogNormalMassAct.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from lognormal/lognormal_LogNormalMassAct.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LogNormalModel.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LogNormalModel.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
In file included from lognormal/lognormal_LogNormalMassAct.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from lognormal/lognormal_LogNormalModel.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_LogNormalModel.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from lognormal/lognormal_MixedICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_MixedICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from lognormal/lognormal_MixedICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_MixedICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from lognormal/lognormal_MultiUnitAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from lognormal/lognormal_MultiUnitAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_MultiUnitAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from lognormal/lognormal_MultiUnitAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from lognormal/lognormal_MultiUnitAbxICP.cpp:1:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
5 warnings generated.
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/modeling_Parameters.cpp -o modeling/modeling_Parameters.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/modeling_TestParams.cpp -o modeling/modeling_TestParams.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_AbxParams.cpp -o modeling/models_AbxParams.o
5 warnings generated.
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_ConstrainedSimulator.cpp -o modeling/models_ConstrainedSimulator.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_DummyModel.cpp -o modeling/models_DummyModel.o
In file included from modeling/modeling_TestParams.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/modeling_Parameters.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/modeling_TestParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/modeling_TestParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/modeling_TestParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/modeling_TestParams.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from modeling/modeling_Parameters.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/modeling_Parameters.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/modeling_Parameters.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/modeling_Parameters.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from modeling/models_AbxParams.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_AbxParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_AbxParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_AbxParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_AbxParams.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_ForwardSimulator.cpp -o modeling/models_ForwardSimulator.o
In file included from modeling/models_DummyModel.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_DummyModel.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_DummyModel.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_DummyModel.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_DummyModel.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from modeling/models_ConstrainedSimulator.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_ConstrainedSimulator.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_ConstrainedSimulator.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_ConstrainedSimulator.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_ConstrainedSimulator.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_InsituParams.cpp -o modeling/models_InsituParams.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_MassActionICP.cpp -o modeling/models_MassActionICP.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_MassActionModel.cpp -o modeling/models_MassActionModel.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_Options.cpp -o modeling/models_Options.o
In file included from modeling/models_ForwardSimulator.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_ForwardSimulator.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_ForwardSimulator.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_ForwardSimulator.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_ForwardSimulator.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from modeling/models_Options.cpp:1:
In file included from ./modeling/Options.h:4:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_OutColParams.cpp -o modeling/models_OutColParams.o
In file included from modeling/models_InsituParams.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_InsituParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_InsituParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_InsituParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_InsituParams.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from modeling/models_MassActionICP.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_MassActionICP.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_MassActionICP.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_MassActionICP.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_MassActionICP.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from modeling/models_MassActionModel.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_MassActionModel.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_MassActionModel.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_MassActionModel.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_MassActionModel.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_RandomTestParams.cpp -o modeling/models_RandomTestParams.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_TestParamsAbx.cpp -o modeling/models_TestParamsAbx.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c modeling/models_UnitLinkedModel.cpp -o modeling/models_UnitLinkedModel.o
In file included from modeling/models_OutColParams.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_OutColParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_OutColParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_OutColParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_OutColParams.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
5 warnings generated.
modeling/models_OutColParams.cpp:41:12: warning: variable 'z' set but not used [-Wunused-but-set-variable]
    double z = 0;
           ^
modeling/models_OutColParams.cpp:42:12: warning: variable 'n' set but not used [-Wunused-but-set-variable]
    double n = 0;
           ^
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c Module.cpp -o Module.o
In file included from Module.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_RandomTestParams.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_RandomTestParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_RandomTestParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_RandomTestParams.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_RandomTestParams.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
7 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c Module-Infect.cpp -o Module-Infect.o
In file included from modeling/models_TestParamsAbx.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_TestParamsAbx.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_TestParamsAbx.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_TestParamsAbx.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_TestParamsAbx.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from modeling/models_UnitLinkedModel.cpp:1:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from modeling/models_UnitLinkedModel.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_UnitLinkedModel.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from modeling/models_UnitLinkedModel.cpp:1:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from modeling/models_UnitLinkedModel.cpp:1:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from Module.cpp:4:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module.cpp:4:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from Module.cpp:4:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module.cpp:4:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
5 warnings generated.
In file included from Module-Infect.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c Module-Infect-System.cpp -o Module-Infect-System.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c Module-lognormal.cpp -o Module-lognormal.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c Module-models.cpp -o Module-models.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c Module-utils.cpp -o Module-utils.o
In file included from Module-Infect-System.cpp:1:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from Module-Infect.cpp:4:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module-Infect.cpp:4:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from Module-Infect.cpp:4:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module-Infect.cpp:4:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from Module-Infect-System.cpp:4:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module-Infect-System.cpp:4:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from Module-Infect-System.cpp:4:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module-Infect-System.cpp:4:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from Module-lognormal.cpp:2:
In file included from ./lognormal/lognormal.h:17:
In file included from ./lognormal/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from Module-lognormal.cpp:2:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module-lognormal.cpp:2:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from Module-lognormal.cpp:2:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module-lognormal.cpp:2:
In file included from ./lognormal/lognormal.h:18:
In file included from ./lognormal/../modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from Module-models.cpp:2:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from Module-models.cpp:2:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module-models.cpp:2:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from Module-models.cpp:2:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module-models.cpp:2:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
In file included from Module-utils.cpp:2:
In file included from ./modeling/modeling.h:16:
In file included from ./modeling/../infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from Module-utils.cpp:2:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module-utils.cpp:2:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from Module-utils.cpp:2:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from Module-utils.cpp:2:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c Random.cpp -o Random.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RRandom.cpp -o RRandom.o
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c runMCMC.cpp -o runMCMC.o
In file included from runMCMC.cpp:6:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c util/util.cc -o util/util.o
In file included from runMCMC.cpp:7:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from runMCMC.cpp:7:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from runMCMC.cpp:7:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from runMCMC.cpp:7:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c util/util_Integer.cpp -o util/util_Integer.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c util/util_List.cpp -o util/util_List.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c util/util_Object.cpp -o util/util_Object.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c util/util_Vector.cpp -o util/util_Vector.o
clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I./infect -I./lognormal -I./modeling -I./util -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/RcppArmadillo/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c wrap.cpp -o wrap.o
5 warnings generated.
In file included from wrap.cpp:1:
In file included from ./wrap.h:8:
In file included from ./infect/infect.h:29:
./infect/RawEvent.h:23:6: warning: 'infect::RawEvent::compare' hides overloaded virtual function [-Woverloaded-virtual]
        int compare (Object const * const e) const;
            ^
./util/Object.h:25:14: note: hidden overloaded virtual function 'util::Object::compare' declared here: type mismatch at 1st parameter ('util::Object *' vs 'const util::Object *const')
        virtual int compare(Object *y);
                    ^
In file included from wrap.cpp:1:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:27:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value)
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 3)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 3)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from wrap.cpp:1:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:49:17: warning: 'models::TestParamsAbx::logProb' hides overloaded virtual function [-Woverloaded-virtual]
        virtual double logProb(infect::HistoryLink *const h) const;
                       ^
./modeling/TestParams.h:45:17: note: hidden overloaded virtual function 'models::TestParams::logProb' declared here: different qualifiers (unqualified vs 'const')
        virtual double logProb(infect::HistoryLink *h) override;
                       ^
In file included from wrap.cpp:1:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:21:
./modeling/TestParamsAbx.h:57:15: warning: 'models::TestParamsAbx::set' hides overloaded virtual functions [-Woverloaded-virtual]
        virtual void set(int i, int j, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
./modeling/TestParams.h:54:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (5 vs 6)
        virtual void set(int i, double value, int update, double prival, double prin);
                     ^
In file included from wrap.cpp:1:
In file included from ./wrap.h:9:
In file included from ./modeling/modeling.h:23:
./modeling/RandomTestParams.h:57:15: warning: 'models::RandomTestParams::set' hides overloaded virtual function [-Woverloaded-virtual]
        virtual void set(bool israte, int i, double value, int update, double prival, double prin);
                     ^
./modeling/TestParams.h:26:15: note: hidden overloaded virtual function 'models::TestParams::set' declared here: different number of parameters (2 vs 6)
        virtual void set(int i, double value)
                     ^
5 warnings generated.
5 warnings generated.
5 warnings generated.
5 warnings generated.
clang++ -arch x86_64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o bayestransmission.so CodeToEvent.o infect/infect_AbxCoding.o infect/infect_AbxLocationState.o infect/infect_AbxPatientState.o infect/infect_CountLocationState.o infect/infect_Episode.o infect/infect_EpisodeHistory.o infect/infect_Event.o infect/infect_Facility.o infect/infect_HistoryLink.o infect/infect_LocationState.o infect/infect_Model.o infect/infect_Patient.o infect/infect_PatientState.o infect/infect_RawEvent.o infect/infect_Sampler.o infect/infect_SetLocationState.o infect/infect_State.o infect/infect_System.o infect/infect_SystemEpisodeHistory.o infect/infect_SystemHistory.o infect/infect_UnitEpisodeHistory.o lognormal/lognormal_LinearAbxICP2.o lognormal/lognormal_LinearAbxICP.o lognormal/lognormal_LinearAbxModel2.o lognormal/lognormal_LinearAbxModel.o lognormal/lognormal_LogNormalAbxICP.o lognormal/lognormal_LogNormalICP.o lognormal/lognormal_LogNormalMassAct.o lognormal/lognormal_LogNormalModel.o lognormal/lognormal_MixedICP.o lognormal/lognormal_MultiUnitAbxICP.o Markov.o modeling/modeling_Parameters.o modeling/modeling_TestParams.o modeling/models_AbxParams.o modeling/models_ConstrainedSimulator.o modeling/models_DummyModel.o modeling/models_ForwardSimulator.o modeling/models_InsituParams.o modeling/models_MassActionICP.o modeling/models_MassActionModel.o modeling/models_Options.o modeling/models_OutColParams.o modeling/models_RandomTestParams.o modeling/models_TestParamsAbx.o modeling/models_UnitLinkedModel.o Module.o Module-Infect.o Module-Infect-System.o Module-lognormal.o Module-models.o Module-utils.o Random.o RcppExports.o RRandom.o runMCMC.o util/util.o util/util_Integer.o util/util_List.o util/util_Object.o util/util_Vector.o wrap.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -lstdc++ -F/Library/Frameworks/R.framework/.. -framework R
installing to /Volumes/Builds/packages/big-sur-x86_64/results/4.5/bayestransmission.Rcheck/00LOCK-bayestransmission/00new/bayestransmission/libs
** generating debug symbols (dSYM)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bayestransmission)