• using R version 4.3.0 beta (2023-04-08 r84203)
• using platform: x86_64-apple-darwin20 (64-bit)
• R was compiled by
      Apple clang version 14.0.3 (clang-1403.0.22.14.1)
      GNU Fortran (GCC) 12.2.0
• running under: macOS Ventura 13.3
• using session charset: UTF-8
• checking for file ‘aroma.affymetrix/DESCRIPTION’ ... OK
• this is package ‘aroma.affymetrix’ version ‘3.2.1’
• checking package namespace information ... OK
• checking package dependencies ... NOTE
  Packages suggested but not available for checking:
    'affxparser', 'oligo', 'oligoClasses', 'pdInfoBuilder',
    'AffymetrixDataTestFiles'
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘aroma.affymetrix’ can be installed ... [21s/21s] OK
  See the install log for details.
• checking installed package size ... NOTE
    installed size is 6.1Mb
    sub-directories of 1Mb or more:
      R 3.0Mb
      help 1.1Mb
      testScripts 1.1Mb
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking startup messages can be suppressed ... [1s/1s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [37s/37s] OK
• checking Rd files ... [3s/3s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... NOTE
  Packages unavailable to check Rd xrefs: ‘affxparser’, ‘oligo’, ‘oligoClasses’
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [4s/4s] OK
    Running ‘001.setupExampleData,annotationData.R’ [1s/1s]
    Running ‘002.setupExampleData,rawData.R’ [1s/1s]
    Running ‘AffymetrixCdfFile.R’ [1s/1s]
    Running ‘AffymetrixCelFile.R’ [1s/1s]
    Running ‘AffymetrixCelSet.R’ [1s/1s]
• checking PDF version of manual ... [16s/16s] OK
• DONE
  Status: 3 NOTEs
• using check arguments '--no-clean-on-error '