• using R version 4.3.0 beta (2023-04-08 r84203)
• using platform: x86_64-apple-darwin20 (64-bit)
• R was compiled by
      Apple clang version 14.0.3 (clang-1403.0.22.14.1)
      GNU Fortran (GCC) 12.2.0
• running under: macOS Ventura 13.3
• using session charset: UTF-8
• checking for file ‘adiv/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘adiv’ version ‘2.2’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘adiv’ can be installed ... [19s/24s] OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the package can be unloaded cleanly ... [3s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
• checking loading without being on the library search path ... [3s/4s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [24s/31s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [4s/6s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes in ‘inst/doc’ ... OK
• checking running R code from vignettes ... [25s/34s] OK
    ‘adivGuide.Rnw’ using ‘latin1’... [25s/34s] OK
• checking re-building of vignette outputs ... [34s/45s] NOTE
  Error(s) in re-building vignettes:
  --- re-building ‘adivGuide.Rnw’ using Sweave
  
  Attaching package: ‘phylobase’
  
  The following object is masked from ‘package:ape’:
  
      edges
  
  Error: processing vignette 'adivGuide.Rnw' failed with diagnostics:
  Running 'texi2dvi' on 'adivGuide.tex' failed.
  LaTeX errors:
  ! LaTeX Error: File `wasysym.sty' not found.
  
  Type X to quit or <RETURN> to proceed,
  or enter new name. (Default extension: sty)
  
  ! Emergency stop.
  <read *>
           
  l.12 \usepackage
                  [all]{xy}^^M
  ! ==> Fatal error occurred, no output PDF file produced!
  --- failed re-building ‘adivGuide.Rnw’
  
  SUMMARY: processing the following file failed:
    ‘adivGuide.Rnw’
  
  Error: Vignette re-building failed.
  Execution halted
  
• checking PDF version of manual ... [7s/9s] OK
• DONE
  Status: 1 NOTE
• using check arguments '--no-clean-on-error '