Check results for 'WRI'

using R Under development (unstable) (2026-03-18 r89649)
using platform: x86_64-apple-darwin20
R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 14.2.0
running under: macOS Ventura 13.3.1
using session charset: UTF-8 * current time: 2026-04-01 20:57:12 UTC
checking for file ‘WRI/DESCRIPTION’ ... OK
checking extension type ... Package
this is package ‘WRI’ version ‘0.2.3’
package encoding: UTF-8
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking whether package ‘WRI’ can be installed ... [26s/20s] OK See the install log for details.
used C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
used SDK: ‘NA’
checking installed package size ... OK
checking package directory ... OK
checking ‘build’ directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking code files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... [0s/1s] OK
checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
checking whether the package can be unloaded cleanly ... [0s/0s] OK
checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
checking loading without being on the library search path ... [0s/1s] OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [3s/4s] OK
checking Rd files ... [0s/0s] OK
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking contents of ‘data’ directory ... OK
checking data for non-ASCII characters ... [0s/0s] OK
checking LazyData ... OK
checking data for ASCII and uncompressed saves ... OK
checking line endings in C/C++/Fortran sources/headers ... OK
checking line endings in Makefiles ... OK
checking compilation flags in Makevars ... OK
checking for GNU extensions in Makefiles ... OK
checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
checking use of PKG_*FLAGS in Makefiles ... OK
checking compiled code ... OK
checking installed files from ‘inst/doc’ ... OK
checking files in ‘vignettes’ ... OK
checking examples ... [4s/5s] ERROR Running examples in ‘WRI-Ex.R’ failed The error most likely occurred in: > ### Name: WARp > ### Title: WAR(p) models: estimation and forecast > ### Aliases: WARp > > ### ** Examples > > # Simulate a density time series represented in quantile functions > # warSimData$sample.ts: A sample TS of quantile functions of length 100, taken from > # the simulation experiments in Section 4 of Zhang et al. 2022. > > # warSimData$quantile.grid: The grid over which quantile functions in sample.ts are evaluated. > > warSimData <- warSim() > > p <- 3 > dSup <- seq(-2, 2, 0.02) > expSup <- seq(-2, 2, 0.1) > > # Estimation: fit a WAR(3) model > WARp_obj <- WARp(warSimData$sample.ts, warSimData$quantile.grid, p) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so': dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib Calls: WARp ... asNamespace -> loadNamespace -> library.dynam -> dyn.load Execution halted
checking for unstated dependencies in ‘tests’ ... OK
checking tests ... [2s/3s] ERROR Running ‘testthat.R’ [2s/2s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(WRI) > > test_check("WRI") Saving _problems/test-den2Q_dq-16.R Saving _problems/test-wass_regress-30.R [ FAIL 2 | WARN 0 | SKIP 0 | PASS 5 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-den2Q_dq.R:16:9'): function den2Q_dq works for standard normal distribution ── Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so': dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib Backtrace: ▆ 1. ├─WRI::den2Q_qd(densityCurves, dSup, t_vec) at test-den2Q_dq.R:16:9 2. │ └─base::sapply(...) 3. │ └─base::lapply(X = X, FUN = FUN, ...) 4. │ └─WRI (local) FUN(X[[i]], ...) 5. └─base::loadNamespace(x) 6. ├─base::namespaceImportFrom(...) 7. │ └─base::asNamespace(ns) 8. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 9. ├─base::namespaceImportFrom(...) 10. │ └─base::asNamespace(ns) 11. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 12. └─base::library.dynam(lib, package, package.lib) 13. └─base::dyn.load(file, DLLpath = DLLpath, ...) ── Error ('test-wass_regress.R:30:9'): function wass_regress works for a trivial example ── Error in `dyn.load(file, DLLpath = DLLpath, ...)`: unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so': dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib Backtrace: ▆ 1. ├─testthat::expect_equal(wass_R2(res), 0.974, tolerance = 0.01) at test-wass_regress.R:30:9 2. │ └─testthat::quasi_label(enquo(object), label) 3. │ └─rlang::eval_bare(expr, quo_get_env(quo)) 4. ├─WRI::wass_R2(res) 5. │ └─base::sapply(...) 6. │ └─base::lapply(X = X, FUN = FUN, ...) 7. │ └─WRI (local) FUN(X[[i]], ...) 8. └─base::loadNamespace(x) 9. ├─base::namespaceImportFrom(...) 10. │ └─base::asNamespace(ns) 11. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 12. ├─base::namespaceImportFrom(...) 13. │ └─base::asNamespace(ns) 14. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 15. └─base::library.dynam(lib, package, package.lib) 16. └─base::dyn.load(file, DLLpath = DLLpath, ...) [ FAIL 2 | WARN 0 | SKIP 0 | PASS 5 ] Error: ! Test failures. Execution halted
checking for unstated dependencies in vignettes ... OK
checking package vignettes ... OK
checking re-building of vignette outputs ... [11s/13s] ERROR Error(s) in re-building vignettes: --- re-building ‘WRI-vignette.Rmd’ using rmarkdown strokeCTdensity package:WRI R Documentation _ S_ t_ r_ o_ k_ e _ d_ a_ t_ a: _ c_ l_ i_ n_ i_ c_ a_ l, _ r_ a_ d_ i_ o_ l_ o_ g_ i_ c_ a_ l _ s_ c_ a_ l_ a_ r _ v_ a_ r_ i_ a_ b_ l_ e_ s _ a_ n_ d _ d_ e_ n_ s_ i_ t_ y _ c_ u_ r_ v_ e_ s _ o_ f _ t_ h_ e _ h_ e_ m_ a_ t_ o_ m_ a _ o_ f _ 3_ 9_ 3 _ s_ t_ r_ o_ k_ e _ p_ a_ t_ i_ e_ n_ t_ s _ D_ e_ s_ c_ r_ i_ p_ t_ i_ o_ n: Stroke data: clinical, radiological scalar variables and density curves of the hematoma of 393 stroke patients _ F_ o_ r_ m_ a_ t: a list of the following three fields: densityCurve: 393-by-101 head CT hematoma densities as distributional response densitySupport: length 101 common support vector predictors: 393-by-9 matrix containing 9 scalar predictors _ R_ e_ f_ e_ r_ e_ n_ c_ e_ s: 'Wasserstein F-tests and confidence bands for the Frechet regression of density response curves, Alexander Petersen, Xi Liu and Afshin A. Divani, 2019' Quitting from WRI-vignette.Rmd:56-59 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `dyn.load()`: ! unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so': dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib --- Backtrace: ▆ 1. ├─WRI::den2Q_qd(densityCurves, dSup, t_vec = seq(0, 1, length.out = 120)) 2. │ └─base::sapply(...) 3. │ └─base::lapply(X = X, FUN = FUN, ...) 4. │ └─WRI (local) FUN(X[[i]], ...) 5. └─base::loadNamespace(x) 6. ├─base::namespaceImportFrom(...) 7. │ └─base::asNamespace(ns) 8. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 9. ├─base::namespaceImportFrom(...) 10. │ └─base::asNamespace(ns) 11. └─base::loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) 12. └─base::library.dynam(lib, package, package.lib) 13. └─base::dyn.load(file, DLLpath = DLLpath, ...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'WRI-vignette.Rmd' failed with diagnostics: unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so': dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib --- failed re-building ‘WRI-vignette.Rmd’ SUMMARY: processing the following file failed: ‘WRI-vignette.Rmd’ Error: Vignette re-building failed. Execution halted
checking PDF version of manual ... [7s/9s] OK
DONE Status: 3 ERRORs
using check arguments '--no-clean-on-error '