• using R version 4.0.2 (2020-06-22)
  • using platform: x86_64-apple-darwin17.0 (64-bit)
  • using session charset: UTF-8
  • checking for file ‘STAR/DESCRIPTION’ ... OK
  • checking extension type ... Package
  • this is package ‘STAR’ version ‘0.3-7’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘STAR’ can be installed ... [11s/15s] OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking dependencies in R code ... NOTE
    'library' or 'require' call to ‘codetools’ which was already attached by Depends.
      Please remove these calls from your code.
    Packages in Depends field not imported from:
      ‘codetools’ ‘gss’
      These packages need to be imported from (in the NAMESPACE file)
      for when this namespace is loaded but not attached.
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... [12s/17s] NOTE
    as.spikeTrain: no visible global function definition for ‘spikeTimes’
    gamObj.gampsth: no visible binding for global variable ‘PoissonF’
    gammaMLE: multiple local function definitions for ‘rFct’ with different
      formal arguments
    gssObj.gsspsth: no visible binding for global variable ‘gfit’
    gssObj.gsspsth0: no visible binding for global variable ‘gfit’
    gsslockedTrain: no visible global function definition for ‘gssanova’
    gsslockedTrain0: no visible global function definition for ‘gssanova0’
    gsspsth: no visible global function definition for ‘gssanova’
    gsspsth0: no visible global function definition for ‘gssanova0’
    invgaussMLE: multiple local function definitions for ‘rFct’ with
      different formal arguments
    lines.CountingProcessSamplePath: no visible binding for global variable
      ‘st’
    mkAR: no visible binding for global variable ‘lN.1’
    mkM2U: no visible global function definition for ‘ssden’
    mkM2U : <anonymous>: no visible global function definition for ‘dssden’
    mkM2U : dFct: no visible global function definition for ‘dssden’
    mkPostSimAnalysis: no visible global function definition for
      ‘findGlobals’
    plot.ssanova: no visible global function definition for ‘X11’
    plot.ssanova0: no visible global function definition for ‘X11’
    qqDuration: no visible binding for global variable ‘yi’
    qqDuration: no visible binding for global variable ‘si’
    reportHTML.gam: no visible global function definition for ‘png’
    reportHTML.gam: no visible global function definition for ‘dev.off’
    reportHTML.repeatedTrain: no visible global function definition for
      ‘png’
    reportHTML.repeatedTrain: no visible global function definition for
      ‘dev.off’
    reportHTML.spikeTrain: no visible global function definition for ‘png’
    reportHTML.spikeTrain: no visible global function definition for
      ‘dev.off’
    reportHTML.spikeTrain : <anonymous>: no visible global function
      definition for ‘png’
    reportHTML.spikeTrain : <anonymous>: no visible global function
      definition for ‘dev.off’
    thinProcess: no visible binding for global variable ‘targetFct’
    thinProcess: no visible binding for global variable ‘posMax’
    Undefined global functions or variables:
      PoissonF X11 dev.off dssden findGlobals gfit gssanova gssanova0 lN.1
      png posMax si spikeTimes ssden st targetFct yi
    Consider adding
      importFrom("grDevices", "X11", "dev.off", "png")
    to your NAMESPACE file.
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking compiled code ... OK
  • checking sizes of PDF files under ‘inst/doc’ ... OK
  • checking installed files from ‘inst/doc’ ... OK
  • checking files in ‘vignettes’ ... OK
  • checking examples ... [5s/8s] OK
  • checking for unstated dependencies in vignettes ... OK
  • checking package vignettes in ‘inst/doc’ ... OK
  • checking running R code from vignettes ... [158s/224s] OK
      ‘IEwSTARshort.Rnw’... [158s/224s] OK
  • checking re-building of vignette outputs ... [169s/240s] OK
  • checking PDF version of manual ... OK
  • DONE
    Status: 2 NOTEs