- using R version 4.3.0 beta (2023-04-08 r84203)
- using platform: x86_64-apple-darwin20 (64-bit)
- R was compiled by
Apple clang version 14.0.3 (clang-1403.0.22.14.1)
GNU Fortran (GCC) 12.2.0
- running under: macOS Ventura 13.3
- using session charset: UTF-8
- checking for file ‘ISwR/DESCRIPTION’ ... OK
- this is package ‘ISwR’ version ‘2.0-8’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘ISwR’ can be installed ... [2s/2s] OK
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [1s/1s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [1s/2s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [6s/6s] OK
Running ‘allexercises.R’ [3s/3s]
Comparing ‘allexercises.Rout’ to ‘allexercises.Rout.save’ ...192c192
< In wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) :
---
> In wilcox.test.default(x = c(4.62, 5.29, 5.52, 3.71, 4.02, 5.09, :
224c224
< alternative hypothesis: true mean difference is not equal to 0
---
> alternative hypothesis: true difference in means is not equal to 0
228c228
< mean difference
---
> mean of the differences
1607a1608,1611
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -1.8492 -0.7536 -0.4838 0.8809 2.5796
>
1633a1638,1641
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -2.00075 -0.36457 -0.09559 0.57964 1.68281
>
1658a1667,1670
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -1.9886 -0.4001 -0.2386 0.5503 1.8189
>
1733a1746,1749
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -1.8298 -0.6412 -0.1189 0.6440 1.7503
>
1806a1823,1826
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -2.59247 -0.04329 0.00000 0.00063 2.60152
>
1829a1850,1853
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -2.5641 -0.0247 0.0000 0.0000 2.5668
>
2012a2037,2044
> Deviance Residuals:
> 1 2 3 4 5 6 7 8
> -0.49634 1.16817 0.32723 0.40686 -1.09690 -0.22273 0.16765 -0.30402
> 9 10 11 12 13 14 15 16
> -0.09277 -0.12546 0.37096 0.08185 0.34354 -0.90739 -0.23107 -0.28244
> 17 18 19 20 21 22 23 24
> 0.77919 0.15943 -0.15340 0.30384 0.09596 0.13145 -0.41848 -0.08840
>
2073a2106,2109
>
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -1.4288 -0.7090 -0.5282 -0.3361 3.4559
Running ‘allscripts.R’ [3s/3s]
Comparing ‘allscripts.Rout’ to ‘allscripts.Rout.save’ ...487c487
< [1] 190
---
> [1] 185
982c982
< alternative hypothesis: true difference in means between group lean and group obese is not equal to 0
---
> alternative hypothesis: true difference in means is not equal to 0
995c995
< alternative hypothesis: true difference in means between group lean and group obese is not equal to 0
---
> alternative hypothesis: true difference in means is not equal to 0
1024c1024
< In wilcox.test.default(x = DATA[[1L]], y = DATA[[2L]], ...) :
---
> In wilcox.test.default(x = c(7.53, 7.48, 8.08, 8.09, 10.15, 8.4, :
1049c1049
< alternative hypothesis: true mean difference is not equal to 0
---
> alternative hypothesis: true difference in means is not equal to 0
1053c1053
< mean difference
---
> mean of the differences
2749,2751c2749,2751
< gr 1 206698 206698 NaN NaN
< factor(gr) 4 17405 4351 NaN NaN
< Residuals 0 0 NaN
---
> gr 1 206698 206698
> factor(gr) 4 17405 4351
> Residuals 0 0
3004c3004
< alternative hypothesis: true difference in means between group Yes and group No is not equal to 0
---
> alternative hypothesis: true difference in means is not equal to 0
3141a3142,3147
> Deviance Residuals:
> 1 2 3 4 5 6
> -0.04344 0.54145 -0.25476 -0.80051 0.19759 -0.46602
> 7 8
> -0.21262 0.56231
>
3164a3171,3176
> Deviance Residuals:
> 1 2 3 4 5 6
> -0.04344 0.54145 -0.25476 -0.80051 0.19759 -0.46602
> 7 8
> -0.21262 0.56231
>
3187a3200,3205
> Deviance Residuals:
> 1 2 3 4 5 6
> -0.01247 0.47756 -0.24050 -0.82050 0.30794 -0.62742
> 7 8
> -0.14449 0.45770
>
3279a3298,3301
> Deviance Residuals:
> <4 4 4.5 5 5.5 6+
> -0.18531 0.00877 -0.32760 0.34087 1.04313 -0.66215
>
3367a3390,3393
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -2.32759 -0.18998 0.01253 0.12132 2.45922
>
3387a3414,3417
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -2.56180 -0.12461 0.02475 0.08055 2.86120
>
3485a3516,3519
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -2.45697 -0.15434 0.00835 0.09505 2.59033
>
3586c3620
< [1,] 205 57 NA NA NA
---
> 205 57 NA NA NA
3727a3762,3765
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -2.63573 -0.67296 -0.03436 0.37258 1.85267
>
3793a3832,3835
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -2.64704 -0.62400 0.02301 0.36721 1.84308
>
3941a3984,3987
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -0.6758 -0.3159 -0.1821 -0.0918 4.1972
>
4003a4050,4053
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -0.4215 -0.3452 -0.2490 -0.1429 3.9398
>
4070a4121,4124
>
> Deviance Residuals:
> Min 1Q Median 3Q Max
> -0.8113 -0.3172 -0.2168 -0.1196 4.1466
- checking PDF version of manual ... [4s/5s] OK
- DONE
Status: OK
- using check arguments '--no-clean-on-error '