* installing *source* package ‘tlrmvnmvt’ ...
** package ‘tlrmvnmvt’ successfully unpacked and MD5 sums checked
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether clang++ -arch arm64 accepts -g... yes
checking for C++ compiler vendor... clang
********************************************************
* WARNING: Don't know the best OPTFLAG for this system *
* Use ./configure OPTFLAG=... to specify your own flags *
* (otherwise, a default of OPTFLAG=-O3 will be used) *
********************************************************
checking whether C++ compiler accepts -O3... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using Fortran compiler: ‘GNU Fortran (GCC) 12.2.0’
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++14
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c aca.cpp -o aca.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c blk_reorder.cpp -o blk_reorder.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c cholesky.cpp -o cholesky.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c cov_kernel.cpp -o cov_kernel.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c covariance.cpp -o covariance.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c internal_r_func.cpp -o internal_r_func.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c inverse.cpp -o inverse.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c misc.cpp -o misc.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c morton.cpp -o morton.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c mvn.cpp -o mvn.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c mvnkernel.cpp -o mvnkernel.o
mvnkernel.cpp:95:9: warning: unused variable 'alpha' [-Wunused-variable]
double alpha, beta;
^
mvnkernel.cpp:95:16: warning: unused variable 'beta' [-Wunused-variable]
double alpha, beta;
^
2 warnings generated.
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c mvphi.f -o mvphi.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c mvt.cpp -o mvt.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c qr.cpp -o qr.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c recur_blk_reorder.cpp -o recur_blk_reorder.o
recur_blk_reorder.cpp:36:6: warning: unused variable 'n' [-Wunused-variable]
int n = nb * m;
^
1 warning generated.
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c svd.cpp -o svd.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c tlr_tlr_add_qr.cpp -o tlr_tlr_add_qr.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c tlrmvn.cpp -o tlrmvn.o
tlrmvn.cpp:70:13: warning: unused variable 'sIncr' [-Wunused-variable]
int sIncr = 1;
^
1 warning generated.
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c tlrmvt.cpp -o tlrmvt.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c uncompress.cpp -o uncompress.o
clang++ -arch arm64 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/BH/include' -I/opt/R/arm64/include -O3 -fPIC -falign-functions=64 -Wall -g -O2 -c uni_reorder.cpp -o uni_reorder.o
clang++ -arch arm64 -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o tlrmvnmvt.so RcppExports.o aca.o blk_reorder.o cholesky.o cov_kernel.o covariance.o internal_r_func.o inverse.o misc.o morton.o mvn.o mvnkernel.o mvphi.o mvt.o qr.o recur_blk_reorder.o svd.o tlr_tlr_add_qr.o tlrmvn.o tlrmvt.o uncompress.o uni_reorder.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: could not create compact unwind for _mvphnv_: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for ___emutls_get_address: registers 23 and 24 not saved contiguously in frame
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.4/tlrmvnmvt.Rcheck/00LOCK-tlrmvnmvt/00new/tlrmvnmvt/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tlrmvnmvt)