- using R version 4.6.1 (2026-06-24)
- using platform: aarch64-apple-darwin23
- R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
- running under: macOS Sequoia 15.7.1
- using session charset: UTF-8
* current time: 2026-09-27 20:23:52 UTC
- checking for file ‘pkgcheck/DESCRIPTION’ ... OK
- this is package ‘pkgcheck’ version ‘0.3.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘pkgcheck’ can be installed ... [1s/2s] OK
See the install log for details.
- checking installed package size ... INFO
installed size is 5.3Mb
sub-directories of 1Mb or more:
doc 4.9Mb
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking whether startup messages can be suppressed ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [2s/2s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [1s/2s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [6s/9s] ERROR
Running ‘testthat.R’ [6s/9s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (pkgcheck)
>
> options (repos = c (
+ ropenscireviewtools = "https://ropensci-review-tools.r-universe.dev",
+ CRAN = "https://cloud.r-project.org"
+ ))
>
> test_check ("pkgcheck")
Saving _problems/test-cache-12.R
Saving _problems/test-check-ci-6.R
Saving _problems/test-check-covr-10.R
i Loading cached pkgstats results from '/Volumes/Temp/tmp/Rtmpv42GjU/pkgcheck/pkgstats_results/pkgstats_2022-05-12-21:41:22'
Saving _problems/test-check-default-branch-5.R
Saving _problems/test-check-goodpractice-6.R
Saving _problems/test-check-srr-5.R
Saving _problems/test-extra-env-check-5.R
1. pkgchk_branch_is_master
2. pkgchk_ci_badges
3. pkgchk_fns_have_exs
4. pkgchk_fns_have_return_vals
5. pkgchk_has_bugs
6. pkgchk_has_citation
7. pkgchk_has_contrib_md
8. pkgchk_has_orcid
9. pkgchk_has_ror
10. pkgchk_has_scrap
11. pkgchk_has_url
12. pkgchk_has_vignette
13. pkgchk_left_assign
14. pkgchk_license
15. pkgchk_lintr
16. pkgchk_no_r_subdir
17. pkgchk_num_imports
18. pkgchk_obsolete_pkg_deps
19. pkgchk_on_cran
20. pkgchk_pkgdown
21. pkgchk_pkgname_available
22. pkgchk_renv_activated
23. pkgchk_repo_has_website
24. pkgchk_repo_not_fork
25. pkgchk_srr_okay
26. pkgchk_unique_fn_names
27. pkgchk_uses_dontrun
28. pkgchk_uses_roxygen2
Saving _problems/test-pkgcheck_bg-37.R
[ FAIL 8 | WARN 0 | SKIP 22 | PASS 27 ]
══ Skipped tests (22) ══════════════════════════════════════════════════════════
• !test_all is TRUE (2): 'test-goodpractice.R:5:1', 'test-pkgcheck.R:5:1'
• On CRAN (17): 'test-check-fns-have-exs.R:1:1',
'test-check-fns-have-return-vals.R:1:1', 'test-check-left-assign.R:4:1',
'test-check-license.R:1:1', 'test-check-no-r-subdir.R:1:1',
'test-check-num-imports.R:1:1', 'test-check-obsolete-pkg-deps.R:1:1',
'test-check-orcid-ror.R:1:1', 'test-check-pkgdown.R:1:1',
'test-check-pkgname-available.R:1:1', 'test-check-renv.R:1:1',
'test-check-repo-has-website.R:1:1', 'test-check-repo-not-fork.R:1:1',
'test-check-scrap.R:5:1', 'test-check-unique-fn-names.R:1:1',
'test-check-uses-dontrun.R:1:1', 'test-extra-checks.R:4:1'
• On Mac (3): 'test-github.R:20:5', 'test-github.R:66:1', 'test-path-fns.R:3:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-cache.R:12:5'): check cache messages ───────────────────────────
<github_error/http_error_403/rlang_error/error/condition>
Error in `gh(endpoint = "POST /graphql", query = query, ...)`: GitHub API error (403): API rate limit exceeded for 130.216.37.249. (But here's the good news: Authenticated requests get a higher rate limit. Check out the documentation for more details.)
i Read more at <https://docs.github.com/rest/overview/resources-in-the-rest-api#rate-limiting>
Backtrace:
▆
1. └─pkgcheck::pkgcheck(path, goodpractice = FALSE, use_cache = TRUE) at test-cache.R:12:5
2. └─pkgcheck:::pkgstats_info(path, use_cache)
3. └─pkgcheck:::pkginfo_git_info(path)
4. └─pkgcheck::get_default_github_branch(org, repo)
5. └─gh::gh_gql(qry)
6. └─gh::gh(endpoint = "POST /graphql", query = query, ...)
7. └─gh:::gh_make_request(req)
8. └─gh:::gh_error(resp, gh_req = x, error_call = error_call)
9. └─cli::cli_abort(...)
10. └─rlang::abort(...)
── Error ('test-check-ci.R:6:5'): check ci ─────────────────────────────────────
<github_error/http_error_403/rlang_error/error/condition>
Error in `gh(endpoint = "POST /graphql", query = query, ...)`: GitHub API error (403): API rate limit exceeded for 130.216.37.249. (But here's the good news: Authenticated requests get a higher rate limit. Check out the documentation for more details.)
i Read more at <https://docs.github.com/rest/overview/resources-in-the-rest-api#rate-limiting>
Backtrace:
▆
1. └─pkgcheck (local) `<fn>`()
2. └─pkgcheck::pkgcheck(path, goodpractice = FALSE) at ./helper-check-data.R:22:5
3. └─pkgcheck:::pkgstats_info(path, use_cache)
4. └─pkgcheck:::pkginfo_git_info(path)
5. └─pkgcheck::get_default_github_branch(org, repo)
6. └─gh::gh_gql(qry)
7. └─gh::gh(endpoint = "POST /graphql", query = query, ...)
8. └─gh:::gh_make_request(req)
9. └─gh:::gh_error(resp, gh_req = x, error_call = error_call)
10. └─cli::cli_abort(...)
11. └─rlang::abort(...)
── Error ('test-check-covr.R:7:5'): check covr ─────────────────────────────────
<github_error/http_error_403/rlang_error/error/condition>
Error in `gh(endpoint = "POST /graphql", query = query, ...)`: GitHub API error (403): API rate limit exceeded for 130.216.37.249. (But here's the good news: Authenticated requests get a higher rate limit. Check out the documentation for more details.)
i Read more at <https://docs.github.com/rest/overview/resources-in-the-rest-api#rate-limiting>
Backtrace:
▆
1. └─pkgcheck (local) `<fn>`(goodpractice = TRUE)
2. └─pkgcheck::pkgcheck(d, goodpractice = goodpractice, use_cache = FALSE) at ./helper-check-data.R:54:5
3. └─pkgcheck:::pkgstats_info(path, use_cache)
4. └─pkgcheck:::pkginfo_git_info(path)
5. └─pkgcheck::get_default_github_branch(org, repo)
6. └─gh::gh_gql(qry)
7. └─gh::gh(endpoint = "POST /graphql", query = query, ...)
8. └─gh:::gh_make_request(req)
9. └─gh:::gh_error(resp, gh_req = x, error_call = error_call)
10. └─cli::cli_abort(...)
11. └─rlang::abort(...)
── Error ('test-check-default-branch.R:5:5'): check default branch ─────────────
<github_error/http_error_403/rlang_error/error/condition>
Error in `gh(endpoint = "POST /graphql", query = query, ...)`: GitHub API error (403): API rate limit exceeded for 130.216.37.249. (But here's the good news: Authenticated requests get a higher rate limit. Check out the documentation for more details.)
i Read more at <https://docs.github.com/rest/overview/resources-in-the-rest-api#rate-limiting>
Backtrace:
▆
1. └─pkgcheck (local) `<fn>`()
2. └─pkgcheck::pkgcheck(path, goodpractice = FALSE) at ./helper-check-data.R:22:5
3. └─pkgcheck:::pkgstats_info(path, use_cache)
4. └─pkgcheck:::pkginfo_git_info(path)
5. └─pkgcheck::get_default_github_branch(org, repo)
6. └─gh::gh_gql(qry)
7. └─gh::gh(endpoint = "POST /graphql", query = query, ...)
8. └─gh:::gh_make_request(req)
9. └─gh:::gh_error(resp, gh_req = x, error_call = error_call)
10. └─cli::cli_abort(...)
11. └─rlang::abort(...)
── Error ('test-check-goodpractice.R:6:5'): check goodpractice ─────────────────
<github_error/http_error_403/rlang_error/error/condition>
Error in `gh(endpoint = "POST /graphql", query = query, ...)`: GitHub API error (403): API rate limit exceeded for 130.216.37.249. (But here's the good news: Authenticated requests get a higher rate limit. Check out the documentation for more details.)
i Read more at <https://docs.github.com/rest/overview/resources-in-the-rest-api#rate-limiting>
Backtrace:
▆
1. └─pkgcheck:::make_check_data_srr_internal(...) at test-check-goodpractice.R:6:5
2. └─pkgcheck::pkgcheck(d, goodpractice = goodpractice, use_cache = FALSE) at ./helper-check-data.R:54:5
3. └─pkgcheck:::pkgstats_info(path, use_cache)
4. └─pkgcheck:::pkginfo_git_info(path)
5. └─pkgcheck::get_default_github_branch(org, repo)
6. └─gh::gh_gql(qry)
7. └─gh::gh(endpoint = "POST /graphql", query = query, ...)
8. └─gh:::gh_make_request(req)
9. └─gh:::gh_error(resp, gh_req = x, error_call = error_call)
10. └─cli::cli_abort(...)
11. └─rlang::abort(...)
── Error ('test-check-srr.R:5:5'): check srr ───────────────────────────────────
<github_error/http_error_403/rlang_error/error/condition>
Error in `gh(endpoint = "POST /graphql", query = query, ...)`: GitHub API error (403): API rate limit exceeded for 130.216.37.249. (But here's the good news: Authenticated requests get a higher rate limit. Check out the documentation for more details.)
i Read more at <https://docs.github.com/rest/overview/resources-in-the-rest-api#rate-limiting>
Backtrace:
▆
1. └─pkgcheck (local) `<fn>`()
2. └─pkgcheck::pkgcheck(d, goodpractice = goodpractice, use_cache = FALSE) at ./helper-check-data.R:54:5
3. └─pkgcheck:::pkgstats_info(path, use_cache)
4. └─pkgcheck:::pkginfo_git_info(path)
5. └─pkgcheck::get_default_github_branch(org, repo)
6. └─gh::gh_gql(qry)
7. └─gh::gh(endpoint = "POST /graphql", query = query, ...)
8. └─gh:::gh_make_request(req)
9. └─gh:::gh_error(resp, gh_req = x, error_call = error_call)
10. └─cli::cli_abort(...)
11. └─rlang::abort(...)
── Error ('test-extra-env-check.R:5:5'): pkgcheck with extra env ───────────────
<github_error/http_error_403/rlang_error/error/condition>
Error in `gh(endpoint = "POST /graphql", query = query, ...)`: GitHub API error (403): API rate limit exceeded for 130.216.37.249. (But here's the good news: Authenticated requests get a higher rate limit. Check out the documentation for more details.)
i Read more at <https://docs.github.com/rest/overview/resources-in-the-rest-api#rate-limiting>
Backtrace:
▆
1. └─pkgcheck (local) `<fn>`(goodpractice = FALSE, cleanup = FALSE)
2. └─pkgcheck::pkgcheck(d, goodpractice = goodpractice, use_cache = FALSE) at ./helper-check-data.R:54:5
3. └─pkgcheck:::pkgstats_info(path, use_cache)
4. └─pkgcheck:::pkginfo_git_info(path)
5. └─pkgcheck::get_default_github_branch(org, repo)
6. └─gh::gh_gql(qry)
7. └─gh::gh(endpoint = "POST /graphql", query = query, ...)
8. └─gh:::gh_make_request(req)
9. └─gh:::gh_error(resp, gh_req = x, error_call = error_call)
10. └─cli::cli_abort(...)
11. └─rlang::abort(...)
── Error ('test-pkgcheck_bg.R:37:5'): pkgcheck_bg() works ──────────────────────
<callr_status_error/callr_error/rlib_error_3_0/rlib_error/error/condition>
Error: ! in callr subprocess.
Caused by error in `gh(endpoint = "POST /graphql", query = query, ...)`:
! GitHub API error (403): API rate limit exceeded for 130.216.37.249. (But here's the good news: Authenticated requests get a higher rate limit. Check out the documentation for more details.)
i Read more at <https://docs.github.com/rest/overview/resources-in-the-rest-api#rate-limiting>
[ FAIL 8 | WARN 0 | SKIP 22 | PASS 27 ]
Deleting unused snapshots: 'extra-checks/checks-extra.html',
'extra-checks/checks-extra.md', 'extra-checks/checks-print.md',
'github/pkgcheck.yaml', 'github/with_inputs.yaml', 'pkgcheck/checks0.html',
'pkgcheck/checks0.md', 'pkgcheck/checks1.html', and 'pkgcheck/checks1.md'
Error:
! Test failures.
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [6s/6s] OK
- checking PDF version of manual ... [2s/2s] OK
- DONE
Status: 1 ERROR