* installing *source* package ‘oscar’ ...
** package ‘oscar’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using Fortran compiler: ‘GNU Fortran (GCC) 12.2.0’
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++17
using SDK: ‘MacOSX11.3.sdk’
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c dbdc.f90 -o dbdc.o
dbdc.f90:11917:8:
11917 | IF (iters==1) THEN
| ^
Warning: ‘iters’ may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:10588:14:
10588 | iters, & ! Null step indicator.
| ^
note: ‘iters’ was declared here
dbdc.f90:19342:54:
19342 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: ‘s_ind’ may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:18595:54:
18595 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: ‘s_ind’ may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:17850:54:
17850 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: ‘s_ind’ may be used uninitialized [-Wmaybe-uninitialized]
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c oscarc.c -o oscarc.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c plqdf1.f -o plqdf1.o
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o oscar.so dbdc.o oscarc.o plqdf1.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
ld: warning: could not create compact unwind for ___emutls_get_address: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD___copy_functions_Set_info: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___bundle1_MOD_update_b1: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___bundle1_MOD_init_bundle_b1: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for _plrmr1_: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___bundle2_MOD_update_b2: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _mxvmul_: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for ___bundle2_MOD_init_bundle_b2: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _pladf1_: registers 72 and 73 not saved contiguously in frame
ld: warning: could not create compact unwind for _plmina_: registers 19 and 20 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_heapsort_ind: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for _plqdf1_: register 75 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_subgradient_f1: registers 74 and 75 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_f2: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_f1: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_f1_sub: registers 76 and 77 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_failures: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_rescaling_beta_log: register 26 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_my_log_subp: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_reduced_log: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_sub_log: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_log: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_my_mse_subp: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_reduced_mse: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_sub_mse: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_mse: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_my_cox_subp: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_reduced_cox: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_sub_cox: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_data_cox: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_mx_reduced: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_deallocate_mx_subp: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_matrices_log: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_matrices_mse: registers 25 and 26 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_matrices_cox: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_my_log_subp: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_data_log: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_my_mse_subp: registers 23 and 24 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_data_mse: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_my_cox_subp: register 24 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_data_cox: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_mx_reduced: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___functions_MOD_allocate_mx_subp: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dbdc_MOD_subproblem_solver: register 73 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___dbdc_MOD_quadratic_solver: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dbdc_MOD_guaranteeing_clarke: registers 78 and 79 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dbdc_MOD_main_iteration: registers 78 and 79 not saved contiguously in frame
ld: warning: could not create compact unwind for ___dbdc_MOD_dbdc_algorithm: registers 74 and 75 not saved contiguously in frame
ld: warning: could not create compact unwind for ___lmbm_sub_MOD_trlieq2: register 28 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___lmbm_sub_MOD_rwaxv2: registers 21 and 22 not saved contiguously in frame
ld: warning: could not create compact unwind for ___lmbm_sub_MOD_symax: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for _dobun.7.constprop.0.isra.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_agskip.constprop.0.isra.0: register 77 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_aggsr1.constprop.0.isra.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_agbfgs.constprop.0.isra.0: registers 74 and 75 not saved contiguously in frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_dlsr1.constprop.0.isra.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_dlbfgs.constprop.0.isra.0: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___initializat_MOD_deallocate_lmbminfo_subp_log: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___initializat_MOD_deallocate_lmbminfo_subp_mse: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___initializat_MOD_init_lmbminfo: registers 27 and 28 not saved contiguously in frame
ld: warning: could not create compact unwind for ___initializat_MOD_deallocate_x_var: register 20 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___initializat_MOD_allocate_xn: register 24 saved somewhere other than in frame
ld: warning: could not create compact unwind for ___lmbm_mod_MOD_lmbm: registers 78 and 79 not saved contiguously in frame
ld: warning: could not create compact unwind for _oscar_logistic_f_: registers 78 and 79 not saved contiguously in frame
ld: warning: could not create compact unwind for _oscar_mse_f_: registers 78 and 79 not saved contiguously in frame
ld: warning: could not create compact unwind for _oscar_cox_f_: registers 78 and 79 not saved contiguously in frame
make[1]: Nothing to be done for `oscar.so'.
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c dbdc.f90 -o dbdc.o
dbdc.f90:11917:8:
11917 | IF (iters==1) THEN
| ^
Warning: ‘iters’ may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:10588:14:
10588 | iters, & ! Null step indicator.
| ^
note: ‘iters’ was declared here
dbdc.f90:19342:54:
19342 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: ‘s_ind’ may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:18595:54:
18595 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: ‘s_ind’ may be used uninitialized [-Wmaybe-uninitialized]
dbdc.f90:17850:54:
17850 | INTEGER(KIND=c_int) :: ind_start, s_ind ! the start index for starting point
| ^
Warning: ‘s_ind’ may be used uninitialized [-Wmaybe-uninitialized]
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c oscarc.c -o oscarc.o
/opt/gfortran/bin/gfortran -arch arm64 -fPIC -Wall -g -O2 -c plqdf1.f -o plqdf1.o
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.4/oscar.Rcheck/00LOCK-oscar/00new/oscar/libs
** generating debug symbols (dSYM)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.4/oscar.Rcheck/00_pkg_src/oscar/src/dbdc.o: timestamp mismatch between object file (2024-04-06 18:34:13.126300242) and debug map (2024-04-06 18:34:01.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.4/oscar.Rcheck/00_pkg_src/oscar/src/oscarc.o: timestamp mismatch between object file (2024-04-06 18:34:13.193106329) and debug map (2024-04-06 18:34:01.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.4/oscar.Rcheck/00_pkg_src/oscar/src/plqdf1.o: timestamp mismatch between object file (2024-04-06 18:34:13.754971487) and debug map (2024-04-06 18:34:02.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.4/oscar.Rcheck/00_pkg_src/oscar/src/dbdc.o: timestamp mismatch between object file (2024-04-06 18:34:13.126300242) and debug map (2024-04-06 18:34:01.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.4/oscar.Rcheck/00_pkg_src/oscar/src/oscarc.o: timestamp mismatch between object file (2024-04-06 18:34:13.193106329) and debug map (2024-04-06 18:34:01.000000000)
warning: /Volumes/Builds/packages/big-sur-arm64/results/4.4/oscar.Rcheck/00_pkg_src/oscar/src/plqdf1.o: timestamp mismatch between object file (2024-04-06 18:34:13.754971487) and debug map (2024-04-06 18:34:02.000000000)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (oscar)