• using R version 4.6.1 (2026-06-24)
• using platform: aarch64-apple-darwin23
• R was compiled by     Apple clang version 17.0.0 (clang-1700.3.19.1)     GNU Fortran (GCC) 14.2.0
• running under: macOS Sequoia 15.7.1
• using session charset: UTF-8 * current time: 2026-09-28 15:59:10 UTC
• checking for file ‘mvglmmRank/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘mvglmmRank’ version ‘1.2-6’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘mvglmmRank’ can be installed ... [3s/3s] OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [3s/3s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
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• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [56s/56s] ERROR   Running ‘neutral-site-home-field.R’ [2s/2s]   Running ‘testthat.R’ [54s/54s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(mvglmmRank)   Loading required package: Matrix   > test_check("mvglmmRank")   Saving _problems/test-numerics-5.R   [ FAIL 1 | WARN 0 | SKIP 0 | PASS 582 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Failure ('test-numerics.R:4:5'): probit derivatives agree with independent differentiation, including the tail ──   Expected `.probit_derivative(q, order)` to equal `numDeriv::grad(...)`.   Differences:   actual != expected but don't know how to show the difference         [ FAIL 1 | WARN 0 | SKIP 0 | PASS 582 ]   Error:   ! Test failures.   Execution halted
• checking PDF version of manual ... [2s/2s] OK
• DONE

Status: 1 ERROR