• using R version 4.5.0 beta (2025-03-29 r88069)
• using platform: aarch64-apple-darwin20
• R was compiled by     Apple clang version 14.0.0 (clang-1400.0.29.202)     GNU Fortran (GCC) 14.2.0
• running under: macOS Ventura 13.4
• using session charset: UTF-8
• checking for file ‘gjam/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘gjam’ version ‘2.6.2’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘gjam’ can be installed ... [17s/20s] OK See the install log for details.
• used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
• used SDK: ‘MacOSX11.3.sdk’
• checking C++ specification ... NOTE   Specified C++11: please drop specification unless essential
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [14s/16s] OK
• checking Rd files ... [0s/0s] NOTE checkRd: (-1) gjamCensorY.Rd:27: Lost braces; missing escapes or markup?     27 | \item{\code{y}}{n by S matrix updated with censored {values} substituted for        | ^ checkRd: (-1) gjamFillMissingTimes.Rd:32: Lost braces     32 | Missing times in the data occur where there are gaps in \code{timeCol} column of \code{xdata} and the initial time \code{0} for each sequence. New versions of the data have \code{NA} (\code{xdata}) or prior values with appropriate weight (\code{ydata}). Missing times are filled in \code{xdata, ydata, edata}, including a time \code{0} which serves as a prior mean for \code{ydata} for time code{1}. The group and time indices in columns \code{groupCol} and \code{timeCol} of \code{xdata} reference the time for a given time series. Missing values in the columns \code{groupVars} of \code{xdata} are filled automatically filled in. This assumes that values for these variables are fixed for the group. If \code{FILLMEANS}, the missing values in \code{ydata} are filled with means for the group and given a low weight specified in \code{missingEffort}.        | ^
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [0s/0s] OK
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [11s/20s] OK
• checking PDF version of manual ... [5s/7s] OK
• DONE Status: 2 NOTEs
• using check arguments '--no-clean-on-error '