* installing *source* package ‘fb4package’ ...
** this is package ‘fb4package’ version ‘2.0.0’
** package ‘fb4package’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘Apple clang version 17.0.0 (clang-1700.3.19.1)’
using C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.3.19.1)’
using SDK: ‘MacOSX14.5.sdk’
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./includes -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fb4_main.cpp -o fb4_main.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I./includes -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c init.c -o init.o
In file included from fb4_main.cpp:1:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/TMB.hpp:96:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from fb4_main.cpp:1:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/TMB.hpp:96:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
fb4_main.cpp:102:17: warning: unused variable 'water_fraction' [-Wunused-variable]
102 | DATA_SCALAR(water_fraction);
| ^~~~~~~~~~~~~~
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/tmb_core.hpp:255:6: note: expanded from macro 'DATA_SCALAR'
255 | Type name(asVector<Type>(getListElement(TMB_OBJECTIVE_PTR -> data, \
| ^~~~
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/tmb_core.hpp:2035:34: note: in instantiation of member function 'objective_function<double>::operator()' requested here
2035 | PROTECT( res = asSEXP( pf->operator()() ) );
| ^
fb4_main.cpp:103:17: warning: unused variable 'fat_energy' [-Wunused-variable]
103 | DATA_SCALAR(fat_energy);
| ^~~~~~~~~~
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/tmb_core.hpp:255:6: note: expanded from macro 'DATA_SCALAR'
255 | Type name(asVector<Type>(getListElement(TMB_OBJECTIVE_PTR -> data, \
| ^~~~
fb4_main.cpp:104:17: warning: unused variable 'protein_energy' [-Wunused-variable]
104 | DATA_SCALAR(protein_energy);
| ^~~~~~~~~~~~~~
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/tmb_core.hpp:255:6: note: expanded from macro 'DATA_SCALAR'
255 | Type name(asVector<Type>(getListElement(TMB_OBJECTIVE_PTR -> data, \
| ^~~~
fb4_main.cpp:105:17: warning: unused variable 'max_fat_fraction' [-Wunused-variable]
105 | DATA_SCALAR(max_fat_fraction);
| ^~~~~~~~~~~~~~~~
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/tmb_core.hpp:255:6: note: expanded from macro 'DATA_SCALAR'
255 | Type name(asVector<Type>(getListElement(TMB_OBJECTIVE_PTR -> data, \
| ^~~~
fb4_main.cpp:439:17: warning: unused variable 'water_fraction' [-Wunused-variable]
439 | DATA_SCALAR(water_fraction);
| ^~~~~~~~~~~~~~
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/tmb_core.hpp:255:6: note: expanded from macro 'DATA_SCALAR'
255 | Type name(asVector<Type>(getListElement(TMB_OBJECTIVE_PTR -> data, \
| ^~~~
fb4_main.cpp:440:17: warning: unused variable 'fat_energy' [-Wunused-variable]
440 | DATA_SCALAR(fat_energy);
| ^~~~~~~~~~
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/tmb_core.hpp:255:6: note: expanded from macro 'DATA_SCALAR'
255 | Type name(asVector<Type>(getListElement(TMB_OBJECTIVE_PTR -> data, \
| ^~~~
fb4_main.cpp:441:17: warning: unused variable 'protein_energy' [-Wunused-variable]
441 | DATA_SCALAR(protein_energy);
| ^~~~~~~~~~~~~~
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/tmb_core.hpp:255:6: note: expanded from macro 'DATA_SCALAR'
255 | Type name(asVector<Type>(getListElement(TMB_OBJECTIVE_PTR -> data, \
| ^~~~
fb4_main.cpp:442:17: warning: unused variable 'max_fat_fraction' [-Wunused-variable]
442 | DATA_SCALAR(max_fat_fraction);
| ^~~~~~~~~~~~~~~~
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/TMB/include/tmb_core.hpp:255:6: note: expanded from macro 'DATA_SCALAR'
255 | Type name(asVector<Type>(getListElement(TMB_OBJECTIVE_PTR -> data, \
| ^~~~
11 warnings generated.
clang++ -arch arm64 -std=gnu++20 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o fb4package.so fb4_main.o init.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R
installing to /Volumes/Builds/packages/sonoma-arm64/results/4.6/fb4package.Rcheck/00LOCK-fb4package/00new/fb4package/libs
** generating debug symbols (dSYM)
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fb4package)