Check results for 'ccar3'

using R version 4.6.0 Patched (2026-05-01 r89994)
using platform: aarch64-apple-darwin23
R was compiled by Apple clang version 17.0.0 (clang-1700.3.19.1) GNU Fortran (GCC) 14.2.0
running under: macOS Sequoia 15.7.1
using session charset: UTF-8 * current time: 2026-05-05 07:08:12 UTC
checking for file ‘ccar3/DESCRIPTION’ ... OK
this is package ‘ccar3’ version ‘0.1.1’
package encoding: UTF-8
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking whether package ‘ccar3’ can be installed ... [2s/2s] OK See the install log for details.
checking installed package size ... OK
checking package directory ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking code files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... [0s/0s] OK
checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
checking whether the package can be unloaded cleanly ... [0s/0s] OK
checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
checking loading without being on the library search path ... [0s/0s] OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [2s/3s] OK
checking Rd files ... [0s/0s] OK
checking Rd metadata ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking examples ... [0s/0s] OK
checking for unstated dependencies in ‘tests’ ... OK
checking tests ... [26s/36s] ERROR Running ‘testthat.R’ [26s/36s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ccar3) > > test_check("ccar3") Permutation 1 out of 50 123456789 Permutation 2 out of 50 123456789 Permutation 3 out of 50 123456789 Permutation 4 out of 50 123456789 Permutation 5 out of 50 123456789 Permutation 6 out of 50 123456789 Permutation 7 out of 50 123456789 Permutation 8 out of 50 123456789 Permutation 9 out of 50 123456789 Permutation 10 out of 50 123456789 Permutation 11 out of 50 123456789 Permutation 12 out of 50 123456789 Permutation 13 out of 50 123456789 Permutation 14 out of 50 123456789 Permutation 15 out of 50 123456789 Permutation 16 out of 50 123456789 Permutation 17 out of 50 123456789 Permutation 18 out of 50 123456789 Permutation 19 out of 50 123456789 Permutation 20 out of 50 123456789 Permutation 21 out of 50 123456789 Permutation 22 out of 50 123456789 Permutation 23 out of 50 123456789 Permutation 24 out of 50 123456789 Permutation 25 out of 50 123456789 Permutation 26 out of 50 123456789 Permutation 27 out of 50 123456789 Permutation 28 out of 50 123456789 Permutation 29 out of 50 123456789 Permutation 30 out of 50 123456789 Permutation 31 out of 50 123456789 Permutation 32 out of 50 123456789 Permutation 33 out of 50 123456789 Permutation 34 out of 50 123456789 Permutation 35 out of 50 123456789 Permutation 36 out of 50 123456789 Permutation 37 out of 50 123456789 Permutation 38 out of 50 123456789 Permutation 39 out of 50 123456789 Permutation 40 out of 50 123456789 Permutation 41 out of 50 123456789 Permutation 42 out of 50 123456789 Permutation 43 out of 50 123456789 Permutation 44 out of 50 123456789 Permutation 45 out of 50 123456789 Permutation 46 out of 50 123456789 Permutation 47 out of 50 123456789 Permutation 48 out of 50 123456789 Permutation 49 out of 50 123456789 Permutation 50 out of 50 123456789 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0479 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0479 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0714 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0714 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0714 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0711 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0802 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0613 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0711 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0802 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0613 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0711 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0802 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0613 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0711 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0802 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0613 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0711 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0802 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0613 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0711 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0802 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0613 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0711 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0802 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0613 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0711 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0802 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0613 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0711 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0802 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0613 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0711 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0802 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0613 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0479 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0374 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.0479 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2331 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1635 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.3507 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2029 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2331 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1635 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.3507 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2029 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2331 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1635 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.3507 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2029 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2331 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1635 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.3507 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2029 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2331 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1635 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.3507 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2029 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2331 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1635 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.3507 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2029 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2331 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1635 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.3507 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2029 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2331 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1635 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.3507 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2029 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2331 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1635 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.3507 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2029 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2331 Estimating optimal shrinkage intensity lambda.var (variance vector): 1 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1635 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.3507 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.2029 Estimating optimal shrinkage intensity lambda.var (variance vector): 0.8132 Estimating optimal shrinkage intensity lambda (correlation matrix): 0.1408 Saving _problems/test-cca_group_rrr-79.R [1] "Done ADMM" [1] "Done CVXR" [1] "We have:" [1] 100 1 5 [1] "--------------------------------------" [1] "Generating data ..." [1] "Number of non zeros is: 5" [1] "Data generated." [1] "--------------------------------------" eps = 1e-04 maxiter = 500 iter: 50 r: 8.41e-15 s: 0.0386 iter: 100 r: 8.12e-15 s: 0.0131 iter: 150 r: 8.55e-15 s: 0.00634 iter: 200 r: 8.43e-15 s: 0.00357 iter: 250 r: 8.62e-15 s: 0.00221 iter: 300 r: 8.77e-15 s: 0.00145 iter: 350 r: 8.94e-15 s: 0.000977 iter: 400 r: 8.72e-15 s: 0.000672 iter: 450 r: 8.5e-15 s: 0.000466 iter: 500 r: 9.08e-15 s: 0.000324 ADMM did not converge (hit maxiter). [1] "We have:" [1] 100 1 5 [1] "--------------------------------------" [1] "Generating data ..." [1] "Number of non zeros is: 5" [1] "Data generated." [1] "--------------------------------------" eps = 1e-04 maxiter = 500 ADMM converged. [1] "We have:" [1] 100 1 5 [1] "--------------------------------------" [1] "Generating data ..." [1] "Number of non zeros is: 5" [1] "Data generated." [1] "--------------------------------------" Starting lambda 1/7: 0.5 lambda 1/7 = 0.5 Finished lambda 1/7 in 0.0s Starting lambda 2/7: 0.1 lambda 2/7 = 0.1 Finished lambda 2/7 in 0.0s Starting lambda 3/7: 0.075 lambda 3/7 = 0.075 Finished lambda 3/7 in 0.0s Starting lambda 4/7: 0.05 lambda 4/7 = 0.05 Finished lambda 4/7 in 0.0s Starting lambda 5/7: 0.01 lambda 5/7 = 0.01 Finished lambda 5/7 in 0.0s Starting lambda 6/7: 0.001 lambda 6/7 = 0.001 Finished lambda 6/7 in 0.0s Starting lambda 7/7: 0.0001 lambda 7/7 = 0.0001 Finished lambda 7/7 in 0.0s Starting lambda 1/7: 0.5 lambda 1/7 = 0.5 Finished lambda 1/7 in 0.0s Starting lambda 2/7: 0.1 lambda 2/7 = 0.1 Finished lambda 2/7 in 0.0s Starting lambda 3/7: 0.075 lambda 3/7 = 0.075 Finished lambda 3/7 in 0.0s Starting lambda 4/7: 0.05 lambda 4/7 = 0.05 Finished lambda 4/7 in 0.0s Starting lambda 5/7: 0.01 lambda 5/7 = 0.01 Finished lambda 5/7 in 0.0s Starting lambda 6/7: 0.001 lambda 6/7 = 0.001 Finished lambda 6/7 in 0.0s Starting lambda 7/7: 0.0001 lambda 7/7 = 0.0001 Finished lambda 7/7 in 0.0s Starting lambda 1/7: 0.5 lambda 1/7 = 0.5 Finished lambda 1/7 in 0.0s Starting lambda 2/7: 0.1 lambda 2/7 = 0.1 Finished lambda 2/7 in 0.0s Starting lambda 3/7: 0.075 lambda 3/7 = 0.075 Finished lambda 3/7 in 0.0s Starting lambda 4/7: 0.05 lambda 4/7 = 0.05 Finished lambda 4/7 in 0.0s Starting lambda 5/7: 0.01 lambda 5/7 = 0.01 Finished lambda 5/7 in 0.0s Starting lambda 6/7: 0.001 lambda 6/7 = 0.001 Finished lambda 6/7 in 0.0s Starting lambda 7/7: 0.0001 lambda 7/7 = 0.0001 Finished lambda 7/7 in 0.0s Starting lambda 1/7: 0.5 lambda 1/7 = 0.5 Finished lambda 1/7 in 0.0s Starting lambda 2/7: 0.1 lambda 2/7 = 0.1 Finished lambda 2/7 in 0.0s Starting lambda 3/7: 0.075 lambda 3/7 = 0.075 Finished lambda 3/7 in 0.0s Starting lambda 4/7: 0.05 lambda 4/7 = 0.05 Finished lambda 4/7 in 0.0s Starting lambda 5/7: 0.01 lambda 5/7 = 0.01 Finished lambda 5/7 in 0.0s Starting lambda 6/7: 0.001 lambda 6/7 = 0.001 Finished lambda 6/7 in 0.0s Starting lambda 7/7: 0.0001 lambda 7/7 = 0.0001 Finished lambda 7/7 in 0.0s Starting lambda 1/7: 0.5 lambda 1/7 = 0.5 Finished lambda 1/7 in 0.0s Starting lambda 2/7: 0.1 lambda 2/7 = 0.1 Finished lambda 2/7 in 0.0s Starting lambda 3/7: 0.075 lambda 3/7 = 0.075 Finished lambda 3/7 in 0.0s Starting lambda 4/7: 0.05 lambda 4/7 = 0.05 Finished lambda 4/7 in 0.0s Starting lambda 5/7: 0.01 lambda 5/7 = 0.01 Finished lambda 5/7 in 0.0s Starting lambda 6/7: 0.001 lambda 6/7 = 0.001 Finished lambda 6/7 in 0.0s Starting lambda 7/7: 0.0001 lambda 7/7 = 0.0001 Finished lambda 7/7 in 0.0s Refitting at selected lambda with ADMM logs... Starting lambda 1/1: 0.05 lambda 1/1 = 0.05 iter 1 r=0.938376 s=0.402581 iter 2 r=0.386388 s=0.351783 iter 3 r=0.174349 s=0.213626 iter 4 r=0.0894817 s=0.118771 iter 5 r=0.0499279 s=0.0651281 iter 6 r=0.0292555 s=0.0362484 iter 7 r=0.017375 s=0.0211264 iter 8 r=0.0105751 s=0.0128797 iter 9 r=0.00652473 s=0.0081953 iter 10 r=0.00407171 s=0.00544353 iter 11 r=0.00257974 s=0.00371766 iter 12 r=0.00165766 s=0.0025963 iter 13 r=0.00107901 s=0.00184187 Finished lambda 1/1 in 0.0s Final ADMM refit completed. [1] "We have:" [1] 100 1 5 [1] "--------------------------------------" [1] "Generating data ..." [1] "Number of non zeros is: 5" [1] "Data generated." [1] "--------------------------------------" Refitting at selected lambda with ADMM logs... Starting lambda 1/1: 0.05 lambda 1/1 = 0.05 iter 1 r=0.938376 s=0.402581 iter 2 r=0.386388 s=0.351783 iter 3 r=0.174349 s=0.213626 iter 4 r=0.0894817 s=0.118771 iter 5 r=0.0499279 s=0.0651281 iter 6 r=0.0292555 s=0.0362484 iter 7 r=0.017375 s=0.0211264 iter 8 r=0.0105751 s=0.0128797 iter 9 r=0.00652473 s=0.0081953 iter 10 r=0.00407171 s=0.00544353 iter 11 r=0.00257974 s=0.00371766 iter 12 r=0.00165766 s=0.0025963 iter 13 r=0.00107901 s=0.00184187 Finished lambda 1/1 in 0.0s Final ADMM refit completed. [ FAIL 1 | WARN 1 | SKIP 0 | PASS 154 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-cca_group_rrr.R:76:3'): cca_group computes the same solutions across solvers ── Error in `Rmosek::mosek(prob, opts)`: Unknown exported object to be built. Please use 'Rmosek::mosek_attachbuilder' to complete the installation of Rmosek. Backtrace: ▆ 1. └─ccar3::cca_group_rrr(...) at test-cca_group_rrr.R:76:3 2. └─ccar3:::solve_group_rrr_cvxr(X, tilde_Y, groups, lambda, thresh_0 = thresh_0) 3. └─CVXR (local) cvxr_psolve(prob) 4. └─CVXR::solve_via_data(...) 5. ├─S7::S7_dispatch() 6. └─CVXR (local) `method(solve_via_data, CVXR::SolvingChain)`(...) 7. └─CVXR::solve_via_data(...) 8. ├─S7::S7_dispatch() 9. └─CVXR (local) `method(solve_via_data, CVXR::Mosek_Solver)`(...) 10. └─Rmosek::mosek(prob, opts) [ FAIL 1 | WARN 1 | SKIP 0 | PASS 154 ] Error: ! Test failures. Execution halted
checking PDF version of manual ... [2s/2s] OK
DONE Status: 1 ERROR
using check arguments '--no-clean-on-error '