Install log for 'balnet'

* installing *source* package ‘balnet’ ...
** this is package ‘balnet’ version ‘0.0.1’
** package ‘balnet’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using C++17
using SDK: ‘MacOSX11.3.1.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -DEIGEN_PERMANENTLY_DISABLE_STUPID_WARNINGS  -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c rcpp_bindings.cpp -o rcpp_bindings.o
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from rcpp_bindings.cpp:1:
In file included from ../inst/include/bindings.hpp:3:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
      Index count = 0;
            ^
In file included from rcpp_bindings.cpp:1:
In file included from ../inst/include/bindings.hpp:3:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
  Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree 
        ^
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
  Index nsuper_et = 0; // Number of relaxed snodes in the original etree 
        ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
                        Index replacements = 0;
                              ^
In file included from rcpp_bindings.cpp:1:
In file included from ../inst/include/bindings.hpp:3:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
                        Index replacements = 0;
                              ^
In file included from rcpp_bindings.cpp:1:
In file included from ../inst/include/bindings.hppIn file included from RcppExports.cpp:4:
In file included from :3:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
37:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246  int count = 0;
      ^:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
  int count = 0;
      ^

5 warnings generated.
In file included from rcpp_bindings.cpp:7:
../inst/include/adelie_ext/solver_cbps_naive.hpp:144:17: warning: unused variable 'eta' [-Wunused-variable]
    const auto& eta = state.eta;
                ^
../inst/include/adelie_ext/solver_cbps_naive.hpp:552:9: note: in instantiation of function template specialization 'adelie_core::solver::cbps::naive::update_solutions<adelie_core::state::StateGlmNaive<adelie_core::constraint::ConstraintBase<double, int>, adelie_core::matrix::MatrixNaiveDense<Eigen::Matrix<double, -1, -1, 0>, int>, double, int, int, int>, adelie_core::glm::GlmCBPS<double>, adelie_core::state::StateGaussianPinNaive<adelie_core::constraint::ConstraintBase<double, int>, adelie_core::matrix::MatrixNaiveDense<Eigen::Matrix<double, -1, -1, 0>, int>, double, int, int>, double>' requested here
        update_solutions(
        ^
../inst/include/adelie_ext/solver_cbps_naive.hpp:582:13: note: in instantiation of function template specialization 'adelie_core::solver::solve_core<adelie_core::state::StateGlmNaive<adelie_core::constraint::ConstraintBase<double, int>, adelie_core::matrix::MatrixNaiveDense<Eigen::Matrix<double, -1, -1, 0>, int>, double, int, int, int> &, adelie_core::util::tq::tqdm_for_rvalues<adelie_core::util::tq::range<int>> &, (lambda at ../inst/include/adelie_ext/solver_cbps_naive.hpp:530:34), (lambda at ../inst/include/adelie_ext/solver_cbps_naive.hpp:538:42), (lambda at ../inst/include/adelie_ext/solver_cbps_naive.hpp:542:38), (lambda at ../inst/include/adelie_ext/solver_cbps_naive.hpp:551:37), (lambda at ../inst/include/adelie_ext/solver_cbps_naive.hpp:560:31), (lambda at ../inst/include/adelie_ext/solver_cbps_naive.hpp:563:27), (lambda at ../inst/include/adelie_ext/solver_cbps_naive.hpp:572:24)>' requested here
    solver::solve_core(
            ^
../inst/include/adelie_ext/solver_cbps_naive.hpp:610:5: note: in instantiation of function template specialization 'adelie_core::solver::cbps::naive::solve<adelie_core::state::StateGlmNaive<adelie_core::constraint::ConstraintBase<double, int>, adelie_core::matrix::MatrixNaiveDense<Eigen::Matrix<double, -1, -1, 0>, int>, double, int, int, int> &, adelie_core::glm::GlmCBPS<double> &, adelie_core::util::tq::tqdm_for_rvalues<adelie_core::util::tq::range<int>> &, (lambda at rcpp_bindings.cpp:45:13), (lambda at ../inst/include/adelie_ext/solver_cbps_naive.hpp:615:9), (lambda at ../inst/include/adelie_ext/solver_cbps_naive.hpp:618:9), (lambda at rcpp_bindings.cpp:35:39)>' requested here
    solve(
    ^
rcpp_bindings.cpp:41:34: note: in instantiation of function template specialization 'adelie_core::solver::cbps::naive::solve<adelie_core::state::StateGlmNaive<adelie_core::constraint::ConstraintBase<double, int>, adelie_core::matrix::MatrixNaiveDense<Eigen::Matrix<double, -1, -1, 0>, int>, double, int, int, int> &, adelie_core::glm::GlmCBPS<double> &, adelie_core::util::tq::tqdm_for_rvalues<adelie_core::util::tq::range<int>> &, (lambda at rcpp_bindings.cpp:45:13), (lambda at rcpp_bindings.cpp:35:39)>' requested here
        ad::solver::cbps::naive::solve(
                                 ^
6 warnings generated.
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o balnet.so RcppExports.o rcpp_bindings.o -F/Library/Frameworks/R.framework/.. -framework R
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.5/balnet.Rcheck/00LOCK-balnet/00new/balnet/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (balnet)