* installing *source* package ‘RNiftyReg’ ... ** package ‘RNiftyReg’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether clang++ -arch arm64 -std=gnu++17 accepts -g... yes checking for OpenMP flag of C++ compiler... unknown configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c main.cpp -o main.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c helpers.cpp -o helpers.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RNifti.cpp -o RNifti.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c AffineMatrix.cpp -o AffineMatrix.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c DeformationField.cpp -o DeformationField.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c aladin.cpp -o aladin.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c f3d.cpp -o f3d.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/AladinContent.cpp -o reg-lib/AladinContent.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/Platform.cpp -o reg-lib/Platform.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/_reg_aladin.cpp -o reg-lib/_reg_aladin.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/_reg_aladin_sym.cpp -o reg-lib/_reg_aladin_sym.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/_reg_base.cpp -o reg-lib/_reg_base.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/_reg_f3d.cpp -o reg-lib/_reg_f3d.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/_reg_f3d2.cpp -o reg-lib/_reg_f3d2.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/_reg_f3d_sym.cpp -o reg-lib/_reg_f3d_sym.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/CPUAffineDeformationFieldKernel.cpp -o reg-lib/cpu/CPUAffineDeformationFieldKernel.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/CPUBlockMatchingKernel.cpp -o reg-lib/cpu/CPUBlockMatchingKernel.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/CPUConvolutionKernel.cpp -o reg-lib/cpu/CPUConvolutionKernel.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/CPUKernelFactory.cpp -o reg-lib/cpu/CPUKernelFactory.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/CPUOptimiseKernel.cpp -o reg-lib/cpu/CPUOptimiseKernel.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/CPUResampleImageKernel.cpp -o reg-lib/cpu/CPUResampleImageKernel.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_blockMatching.cpp -o reg-lib/cpu/_reg_blockMatching.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_globalTrans.cpp -o reg-lib/cpu/_reg_globalTrans.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_localTrans.cpp -o reg-lib/cpu/_reg_localTrans.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_localTrans_jac.cpp -o reg-lib/cpu/_reg_localTrans_jac.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_localTrans_regul.cpp -o reg-lib/cpu/_reg_localTrans_regul.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_maths.cpp -o reg-lib/cpu/_reg_maths.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_maths_eigen.cpp -o reg-lib/cpu/_reg_maths_eigen.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_nmi.cpp -o reg-lib/cpu/_reg_nmi.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_optimiser.cpp -o reg-lib/cpu/_reg_optimiser.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_resampling.cpp -o reg-lib/cpu/_reg_resampling.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_splineBasis.cpp -o reg-lib/cpu/_reg_splineBasis.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_R -DHAVE_ZLIB -I. -Ireg-lib -Ireg-lib/cpu -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/RNifti/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c reg-lib/cpu/_reg_tools.cpp -o reg-lib/cpu/_reg_tools.o clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o RNiftyReg.so main.o helpers.o RNifti.o AffineMatrix.o DeformationField.o aladin.o f3d.o reg-lib/AladinContent.o reg-lib/Platform.o reg-lib/_reg_aladin.o reg-lib/_reg_aladin_sym.o reg-lib/_reg_base.o reg-lib/_reg_f3d.o reg-lib/_reg_f3d2.o reg-lib/_reg_f3d_sym.o reg-lib/cpu/CPUAffineDeformationFieldKernel.o reg-lib/cpu/CPUBlockMatchingKernel.o reg-lib/cpu/CPUConvolutionKernel.o reg-lib/cpu/CPUKernelFactory.o reg-lib/cpu/CPUOptimiseKernel.o reg-lib/cpu/CPUResampleImageKernel.o reg-lib/cpu/_reg_blockMatching.o reg-lib/cpu/_reg_globalTrans.o reg-lib/cpu/_reg_localTrans.o reg-lib/cpu/_reg_localTrans_jac.o reg-lib/cpu/_reg_localTrans_regul.o reg-lib/cpu/_reg_maths.o reg-lib/cpu/_reg_maths_eigen.o reg-lib/cpu/_reg_nmi.o reg-lib/cpu/_reg_optimiser.o reg-lib/cpu/_reg_resampling.o reg-lib/cpu/_reg_splineBasis.o reg-lib/cpu/_reg_tools.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/packages/big-sur-arm64/results/4.4/RNiftyReg.Rcheck/00LOCK-RNiftyReg/00new/RNiftyReg/libs ** generating debug symbols (dSYM) ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RNiftyReg)