* installing *source* package ‘RNifti’ ...
** package ‘RNifti’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... clang -arch arm64
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether clang -arch arm64 accepts -g... yes
checking for clang -arch arm64 option to enable C11 features... none needed
checking for library containing inflate... -lz
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c main.cpp -o main.o
main.cpp:726:40: warning: suggest braces around initialization of subobject [-Wmissing-braces]
const Rcomplex naValue = { NA_REAL, NA_REAL };
^~~~~~~~~~~~~~~~
{ }
/Library/Frameworks/R.framework/Resources/include/R_ext/Arith.h:58:18: note: expanded from macro 'NA_REAL'
#define NA_REAL R_NaReal
^
main.cpp:780:40: warning: suggest braces around initialization of subobject [-Wmissing-braces]
const Rcomplex naValue = { NA_REAL, NA_REAL };
^~~~~~~~~~~~~~~~
{ }
/Library/Frameworks/R.framework/Resources/include/R_ext/Arith.h:58:18: note: expanded from macro 'NA_REAL'
#define NA_REAL R_NaReal
^
2 warnings generated.
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c zzz.c -o zzz.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c znzlib/znzlib.c -o znzlib/znzlib.o
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c niftilib/nifti1_io.c -o niftilib/nifti1_io.o
niftilib/nifti1_io.c:353:19: warning: unused variable 'gni_version' [-Wunused-const-variable]
static const char gni_version[] = NIFTI1_IO_SOURCE_VERSION " (16 Jun, 2022)";
^
niftilib/nifti1_io.c:363:29: warning: unused variable 'nifti_type_list' [-Wunused-const-variable]
static const nifti_type_ele nifti_type_list[] = {
^
niftilib/nifti1_io.c:3337:12: warning: unused function 'compare_strlist' [-Wunused-function]
static int compare_strlist(const char * str, char ** strlist, int len)
^
niftilib/nifti1_io.c:3292:12: warning: unused function 'is_mixedcase' [-Wunused-function]
static int is_mixedcase(const char * str)
^
niftilib/nifti1_io.c:3276:12: warning: unused function 'is_uppercase' [-Wunused-function]
static int is_uppercase(const char * str)
^
niftilib/nifti1_io.c:3323:12: warning: unused function 'make_lowercase' [-Wunused-function]
static int make_lowercase(char * str)
^
niftilib/nifti1_io.c:3310:12: warning: unused function 'make_uppercase' [-Wunused-function]
static int make_uppercase(char * str)
^
niftilib/nifti1_io.c:449:14: warning: unused function 'print_hex_vals' [-Wunused-function]
static int print_hex_vals (const char * data, size_t nbytes, FILE * fp);
^
niftilib/nifti1_io.c:6135:14: warning: unused function 'escapize_string' [-Wunused-function]
static char *escapize_string( const char * str )
^
9 warnings generated.
clang -arch arm64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DNDEBUG -DHAVE_ZLIB -DUSING_R -DRNIFTI_NIFTILIB_DEDUPLICATE -I../inst/include -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.4/Rcpp/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c niftilib/nifti2_io.c -o niftilib/nifti2_io.o
niftilib/nifti2_io.c:4468:12: warning: unused function 'print_hex_vals' [-Wunused-function]
static int print_hex_vals( const char * data, size_t nbytes, FILE * fp )
^
niftilib/nifti2_io.c:8250:14: warning: unused function 'escapize_string' [-Wunused-function]
static char *escapize_string( const char * str )
^
2 warnings generated.
clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o RNifti.so main.o zzz.o znzlib/znzlib.o niftilib/nifti1_io.o niftilib/nifti2_io.o -lz -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Volumes/Builds/packages/big-sur-arm64/results/4.4/RNifti.Rcheck/00LOCK-RNifti/00new/RNifti/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RNifti)