* installing *source* package ‘EDI’ ...
** this is package ‘EDI’ version ‘1.0.2’
** package ‘EDI’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.3.19.1)’
using SDK: ‘MacOSX14.5.sdk’
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c unity_01.cpp -o unity_01.o
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c unity_02.cpp -o unity_02.o
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c unity_03.cpp -o unity_03.o
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c unity_04.cpp -o unity_04.o
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c unity_05.cpp -o unity_05.o
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c unity_06.cpp -o unity_06.o
In file included from unity_04.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61In file included from In file included from unity_01.cpp:unity_03.cppIn file included from :7:
In file included from 7unity_02.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h::
25In file included from :
:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h./_helper_functions.hunity_05.cpp:7:
In file included from ./_helper_functions.hIn file included from :unity_06.cppIn file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse./_helper_functions.h:28::26:
273:::
2813:28::
In file included from In file included from :
warning: In file included from In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.hvariable 'count' set but not used [-Wunused-but-set-variable]
:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from :In file included from 25273/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse: | :/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:
2561:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:27326In file included from :26:
:
:In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:
:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
In file included from IIn file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCoren29 273 | :
29dex co:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore::u61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h61/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:
In file included from :/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse: 273 n26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
:13: Inde/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h61:t/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
:
:273:x/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h = 0;273:273:13 | :
warning: variable 'count' set but not used [-Wunused-but-set-variable] Ind
13: warning: couwarning: variable 'count' set but not used [-Wunused-but-set-variable]
ex 273nvariable 'count' set but not used [-Wunused-but-set-variable]
| ^
| 273 Inde 273tx | = | countc Index count = 0;
= 0 Inodex | unt = ;
| ^
0;
| ^
count = 0;
| ^
^
0;
| ^
In file included from unity_03.cpp:7:
In file included from In file included from In file included from In file included from unity_04.cppunity_01.cppIn file included from :7:
In file included from ./_helper_functions.h:28:
unity_06.cpp:7unity_02.cpp::
:In file included from 7:
In file included from unity_05.cpp./_helper_functions.h::7:
728In file included from :
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h./_helper_functions.hIn file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:
In file included from In file included from :29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h./_helper_functions.h:28/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:
28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
:::In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29In file included from 29:
35:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:78::
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: 25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h::
variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | In file included from In file included from 29:/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseI/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:
9::: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
In file included from 2978nde78::x/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78:
| In | dIn file included from Index nsuper_et_posn35:/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: s29up:
eIn file included from :
exrt /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.hvariable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]:78:9: nsuper_et_po
78 | _swarning: /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU t = e t_post = 0variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]Index ns
:35;0=; u 78 | 0; /// :
/ NuI/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h p:Neu n78md/:rbmbe9/_e Numbee: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]rr r
e x 78to_p | f os nso fIrtondeuper_et_po = 0;xst = 0; // Num ebf ler of nsuper_et_ /axed snodes in posrpor/relae tlelaxed snaodes in pooxed snodes rdered etree
| ^
storderexedsin potNd /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h sne: to79um:9:dreeb=sere 0; too rdered // Number of
warning: s | ^
variable 'nsuper_et' set but not used [-Wunused-but-set-variable]/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]i
nf 79 etr ree
ela p
| ^
or | /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.helax s 79 | :79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]xe
tordered etreeIn Ind
| ^
e/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h79x nsed | dex: nsuper_et sd79uper_et Index nsun := osd90no;: es in po sd warning: es in =variable 'nsuper_et' set but not used [-Wunused-but-set-variable]ptorde/
79 | Index nsuper_et = 0; // Nered etr peostoru/ Numbere0; // rdNmu beoerm _bet = 0; erf
r of ro ed fretree
| ^
// /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h: re 79el:elaxed snN| 9: umbodeswarning: e ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79avariable 'nsuper_et' set but not used [-Wunused-but-set-variable]
in :laxed snodxer d the orig snoeinald79 | ete9s in theI oof relaxed snod: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
ers 79 | nde in tix ree
| ^ gh
nIienal esndex nsutrepersuper__e
et = | ^
origiet = 0; // inal etree
| ^
Numbn theer 0; /of r ori/ginal etree
| ^
elaxed snodes i Number of relaxed n the origisnodes nain tl etree
| ^
he original etree
| ^
In file included from unity_01.cpp:7:
In file included from In file included from In file included from In file included from unity_02.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:./_helper_functions.hIn file included from unity_06.cpp:In file included from 4628unity_05.cpp:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10unity_03.cppunity_04.cpp:7:
::
:In file included from In file included from :7:
In file included from ./_helper_functions.h:28:
In file included from 7./_helper_functions.h:28:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
::
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h25In file included from ./_helper_functions.h:
:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.hIn file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
::72In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:28: 72 | :
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
107231:
: In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46Iwarning: variable 'replacements' set but not used [-Wunused-but-set-variable]
:
:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: :1072/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
In file included from warning: n | variable 'replacements' set but not used [-Wunused-but-set-variable]
Index replac 72:/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h edm | eewarning: 72: | Indvariable 'replacements' set but not used [-Wunused-but-set-variable] x re25x r:
ents plaIndex replacem 72=e nts =ce | Index replac0;
| ^
0;
eemIn file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31 menents =ptsl | :
aceIn file included from = 0;
| /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
^
ments = 0;
^
| ^
72 | Index r0;
| eplacement ^
s = 0;
| ^
In file included from unity_03.cpp:7:
In file included from ./_helper_functions.h:In file included from In file included from unity_04.cpp28unity_06.cpp:7::
7In file included from unity_05.cpp:7:
In file included from :
In file included from ./_helper_functions.h:28:
./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
:
In file included from In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.hIn file included from ./_helper_functions.hunity_01.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from In file included from :/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:3728:/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from In file included from 246:7/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtraunity_02.cpp:7:
In file included from ./_helper_functions.h:28:
::
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h warning: variable 'count' set but not used [-Wunused-but-set-variable]
:
In file included from In file included from :25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45 :
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | :In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h45246: | :
:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h: int /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h :c/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtrai:o45u24625:
n:nt cou:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:In file included from t = 0;n/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h24637:
7
:t:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h=::warning: | 24645246: ^
variable 'count' set but not used [-Wunused-but-set-variable]
:
246 | int cou/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h0;
| ^
7:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
:n | int warning: variable 'count' set but not used [-Wunused-but-set-variable]t = 0;
| ^
c246 | int 246 | int count = 0;
| ^
count = 0;
| ^
ount = 0;
| ^
In file included from unity_03.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:38:
./ordinal_fixed_link_helpers.h:265:19: warning: unused variable 'n_params' [-Wunused-variable]
265 | const int n_params = params.size();
| ^~~~~~~~
In file included from unity_04.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:38:
./ordinal_fixed_link_helpers.h:265:19: warning: unused variable 'n_params' [-Wunused-variable]
265 | const int n_params = params.size();
| ^~~~~~~~
In file included from unity_01.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:38:
./ordinal_fixed_link_helpers.h:265:19: warning: unused variable 'n_params' [-Wunused-variable]
265 | const int n_params = params.size();
| ^~~~~~~~
In file included from unity_02.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:38:
./ordinal_fixed_link_helpers.h:265:19: warning: unused variable 'n_params' [-Wunused-variable]
265 | const int n_params = params.size();
| ^~~~~~~~
In file included from unity_06.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:38:
./ordinal_fixed_link_helpers.h:265:19: warning: unused variable 'n_params' [-Wunused-variable]
265 | const int n_params = params.size();
| ^~~~~~~~
In file included from unity_05.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:38:
./ordinal_fixed_link_helpers.h:265:19: warning: unused variable 'n_params' [-Wunused-variable]
265 | const int n_params = params.size();
| ^~~~~~~~
In file included from unity_03.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:39:
./optimization_starts.h:50:15: warning: unused variable 'n' [-Wunused-variable]
50 | const int n = X.rows();
| ^
In file included from unity_01.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:39:
./optimization_starts.h:50:15: warning: unused variable 'n' [-Wunused-variable]
50 | const int n = X.rows();
| ^
In file included from unity_04.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:39:
./optimization_starts.h:50:15: warning: unused variable 'n' [-Wunused-variable]
50 | const int n = X.rows();
| ^
In file included from unity_05.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:39:
./optimization_starts.h:50:15: warning: unused variable 'n' [-Wunused-variable]
50 | const int n = X.rows();
| ^
In file included from unity_02.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:39:
./optimization_starts.h:50:15: warning: unused variable 'n' [-Wunused-variable]
50 | const int n = X.rows();
| ^
In file included from unity_06.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:39:
./optimization_starts.h:50:15: warning: unused variable 'n' [-Wunused-variable]
50 | const int n = X.rows();
| ^
In file included from unity_03.cpp:11:
./fast_hurdle_poisson_glmm.cpp:367:17: warning: unused variable 'll_g' [-Wunused-variable]
367 | const double ll_g = glmm::log_sum_exp_and_weights(m_log_terms, m_post_weights);
| ^~~~
In file included from unity_04.cpp:11:
./fast_jonckheere_terpstra.cpp:244:14: warning: unused variable 'use_parallel' [-Wunused-variable]
244 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
In file included from unity_04.cpp:14:
./fast_wilcox_parallel.cpp:74:14: warning: unused variable 'use_parallel' [-Wunused-variable]
74 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
./fast_wilcox_parallel.cpp:143:14: warning: unused variable 'use_parallel' [-Wunused-variable]
143 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
In file included from unity_04.cpp:16:
./ols_distr_parallel.cpp:48:20: warning: unused variable 'use_parallel' [-Wunused-variable]
48 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
In file included from unity_01.cpp:17:
./rand_bootstrap_mean_diff_parallel.cpp:73:13: warning: unused variable 'use_parallel' [-Wunused-variable]
73 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
./rand_bootstrap_mean_diff_parallel.cpp:140:13: warning: unused variable 'use_parallel' [-Wunused-variable]
140 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
In file included from unity_01.cpp:18:
./simple_mean_diff_parallel.cpp:31:13: warning: unused variable 'use_parallel' [-Wunused-variable]
31 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
In file included from unity_03.cpp:15:
./kk21_weights.cpp:223:9: warning: variable 'best_a' set but not used [-Wunused-but-set-variable]
223 | double best_a = 0.0;
| ^
./kk21_weights.cpp:181:15: warning: unused variable 'eps' [-Wunused-variable]
181 | const double eps = std::numeric_limits<double>::epsilon();
| ^~~
./ols_distr_parallel.cpp:148:20: warning: unused variable 'use_parallel' [-Wunused-variable]
148 | const bool use_parallel = should_parallelize_replicates(B, n_boot, num_cores);
| ^~~~~~~~~~~~
In file included from unity_02.cpp:17:
./rand_bootstrap_ols_parallel.cpp:44:13: warning: unused variable 'use_parallel' [-Wunused-variable]
44 | const bool use_parallel = should_parallelize_replicates(nsim, n * p * p, num_cores);
| ^~~~~~~~~~~~
In file included from unity_05.cpp:9:
./compute_all_subject_data.cpp:7:25: warning: unused function 'which_cols_vary' [-Wunused-function]
7 | static std::vector<int> which_cols_vary(const MatrixXd& X) {
| ^~~~~~~~~~~~~~~
./compute_all_subject_data.cpp:37:17: warning: unused function 'extract_row_cols' [-Wunused-function]
37 | static VectorXd extract_row_cols(const MatrixXd& X, int row, const std::vector<int>& cols) {
| ^~~~~~~~~~~~~~~~
In file included from unity_05.cpp:14:
./fast_zero_augmented_poisson.cpp:18:8: warning: unused function 'Rf_log1pexp' [-Wunused-function]
18 | double log1pexp(double x) {
| ^~~~~~~~
/Library/Frameworks/R.framework/Resources/include/Rmath.h:268:25: note: expanded from macro 'log1pexp'
268 | #define log1pexp Rf_log1pexp
| ^~~~~~~~~~~
In file included from unity_02.cpp:11:
./fast_hurdle_negbin.cpp:22:8: warning: unused function 'clamp_exp_arg_hnb' [-Wunused-function]
22 | double clamp_exp_arg_hnb(double eta) {
| ^~~~~~~~~~~~~~~~~
10 warnings generated.
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c unity_07.cpp -o unity_07.o
In file included from unity_07.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from unity_07.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from unity_07.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from unity_07.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from unity_07.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:38:
./ordinal_fixed_link_helpers.h:265:19: warning: unused variable 'n_params' [-Wunused-variable]
265 | const int n_params = params.size();
| ^~~~~~~~
12 warnings generated.
In file included from unity_07.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:39:
./optimization_starts.h:50:15: warning: unused variable 'n' [-Wunused-variable]
50 | const int n = X.rows();
| ^
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c unity_08.cpp -o unity_08.o
7 warnings generated.
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c unity_09.cpp -o unity_09.o
In file included from unity_08.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from unity_08.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from unity_08.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from unity_08.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from unity_08.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:38:
./ordinal_fixed_link_helpers.h:265:19: warning: unused variable 'n_params' [-Wunused-variable]
265 | const int n_params = params.size();
| ^~~~~~~~
In file included from unity_07.cpp:15:
./kk_compound_distr_parallel.cpp:29:13: warning: unused variable 'use_parallel' [-Wunused-variable]
29 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
./kk_compound_distr_parallel.cpp:134:13: warning: unused variable 'use_parallel' [-Wunused-variable]
134 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
In file included from unity_08.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:39:
./optimization_starts.h:50:15: warning: unused variable 'n' [-Wunused-variable]
50 | const int n = X.rows();
| ^
In file included from unity_07.cpp:17:
./ridit_distr_parallel.cpp:125:16: warning: unused variable 'use_parallel' [-Wunused-variable]
125 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
./ridit_distr_parallel.cpp:181:16: warning: unused variable 'use_parallel' [-Wunused-variable]
181 | const bool use_parallel = should_parallelize_replicates(B, n, num_cores);
| ^~~~~~~~~~~~
./ridit_distr_parallel.cpp:248:16: warning: unused variable 'use_parallel' [-Wunused-variable]
248 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
In file included from unity_09.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from unity_09.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from unity_09.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from unity_09.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from unity_09.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:38:
./ordinal_fixed_link_helpers.h:265:19: warning: unused variable 'n_params' [-Wunused-variable]
265 | const int n_params = params.size();
| ^~~~~~~~
In file included from unity_09.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:39:
./optimization_starts.h:50:15: warning: unused variable 'n' [-Wunused-variable]
50 | const int n = X.rows();
| ^
In file included from unity_08.cpp:14:
./gcomp_speedups.cpp:103:13: warning: unused variable 'n' [-Wunused-variable]
103 | const int n = X_fit.rows();
| ^
In file included from unity_09.cpp:9:
./design_optimal_annealing_search.cpp:160:13: warning: unused variable 'parallel_ok' [-Wunused-variable]
160 | const bool parallel_ok = (kind != ObjKind::custom);
| ^~~~~~~~~~~
In file included from unity_09.cpp:10:
./fast_gaussian_lmm.cpp:73:24: warning: variable 'gi' set but not used [-Wunused-but-set-variable]
73 | int prev = -1, gi = 0;
| ^
In file included from unity_08.cpp:17:
./robust_post_fit_speedups.cpp:177:13: warning: unused variable 'n' [-Wunused-variable]
177 | const int n = X_fit.rows();
| ^
In file included from unity_09.cpp:11:
./fast_logrank.cpp:181:14: warning: unused variable 'use_parallel' [-Wunused-variable]
181 | const bool use_parallel = should_parallelize_replicates(nsim, n, num_cores);
| ^~~~~~~~~~~~
10 warnings generated.
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c unity_10.cpp -o unity_10.o
10 warnings generated.
clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/Rcpp/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include' -I'/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppNumerical/include' -I/opt/R/arm64/include -DNDEBUG -DEIGEN_NO_DEBUG -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
In file included from unity_10.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from unity_10.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from unity_10.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from unity_10.cpp:7:
In file included from ./_helper_functions.h:28:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:26:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseCore:61:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/Sparse:29:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/SparseLU:35:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:31:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigen.h:25:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/RcppEigenForward.h:37:
In file included from /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
In file included from unity_10.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:38:
./ordinal_fixed_link_helpers.h:265:19: warning: unused variable 'n_params' [-Wunused-variable]
265 | const int n_params = params.size();
| ^~~~~~~~
In file included from unity_10.cpp:7:
In file included from ./_helper_functions.h:29:
In file included from ./_helper_functions_core.h:39:
./optimization_starts.h:50:15: warning: unused variable 'n' [-Wunused-variable]
50 | const int n = X.rows();
| ^
In file included from unity_10.cpp:13:
./fast_survival_stats.cpp:245:12: warning: unused variable 'last_unique_time' [-Wunused-variable]
245 | double last_unique_time = -1.0;
| ^~~~~~~~~~~~~~~~
./fast_survival_stats.cpp:246:9: warning: unused variable 'at_risk' [-Wunused-variable]
246 | int at_risk = n;
| ^~~~~~~
9 warnings generated.
In file included from unity_08.cpp:12:
./fast_ordinal_probit_regression.cpp:54:17: warning: unused function 'pseudo_inverse_symmetric_probit' [-Wunused-function]
54 | static MatrixXd pseudo_inverse_symmetric_probit(const Eigen::Ref<const Eigen::MatrixXd>& A, double tol = 1e-8) {
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from unity_08.cpp:13:
./fast_stereotype_logit.cpp:469:17: warning: unused function 'pseudo_inverse_symmetric' [-Wunused-function]
469 | static MatrixXd pseudo_inverse_symmetric(const Eigen::Ref<const MatrixXd>& A, double tol = 1e-8) {
| ^~~~~~~~~~~~~~~~~~~~~~~~
5 warnings generated.
9 warnings generated.
10 warnings generated.
11 warnings generated.
12 warnings generated.
clang++ -arch arm64 -std=gnu++20 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o EDI.so unity_01.o unity_02.o unity_03.o unity_04.o unity_05.o unity_06.o unity_07.o unity_08.o unity_09.o unity_10.o RcppExports.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -fstack-protector -F/Library/Frameworks/R.framework/.. -framework R
installing to /Volumes/Builds/packages/sonoma-arm64/results/4.6/EDI.Rcheck/00LOCK-EDI/00new/EDI/libs
** generating debug symbols (dSYM)
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (EDI)