- using R version 4.5.0 beta (2025-03-29 r88069)
- using platform: aarch64-apple-darwin20
- R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 14.2.0
- running under: macOS Ventura 13.4
- using session charset: UTF-8
- checking for file ‘DiceOptim/DESCRIPTION’ ... OK
- this is package ‘DiceOptim’ version ‘2.1.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘DiceOptim’ can be installed ... [4s/6s] OK
See the install log for details.
- used C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
- used SDK: ‘MacOSX11.3.sdk’
- checking installed package size ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [5s/6s] OK
- checking Rd files ... [0s/0s] NOTE
checkRd: (-1) EGO.cst.Rd:71: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EGO.cst.Rd:72: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EGO.cst.Rd:73: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EGO.cst.Rd:74: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EGO.cst.Rd:75: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EGO.cst.Rd:76: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) EGO.cst.Rd:77: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) crit_AL.Rd:28: Lost braces in \itemize; meant \describe ?
checkRd: (-1) crit_AL.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) crit_AL.Rd:30: Lost braces in \itemize; meant \describe ?
checkRd: (-1) crit_AL.Rd:31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) crit_AL.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) crit_AL.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) critcst_optimizer.Rd:48: Lost braces in \itemize; meant \describe ?
checkRd: (-1) critcst_optimizer.Rd:49: Lost braces in \itemize; meant \describe ?
checkRd: (-1) easyEGO.Rd:60: Lost braces
60 | \item \code{trace}{: between -1 and 3}
| ^
checkRd: (-1) easyEGO.Rd:61: Lost braces
61 | \item \code{seed}{: to fix the seed of the run}
| ^
checkRd: (-1) easyEGO.Rd:62: Lost braces
62 | \item \code{cov.reestim}{: Boolean, if TRUE (default) the covariance parameters are re-estimated at each iteration}
| ^
checkRd: (-1) easyEGO.Rd:63: Lost braces
63 | \item \code{model.trend}{: trend for the GP model}
| ^
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64 | \item \code{lb, ub}{: lower and upper bounds for the GP covariance ranges}
| ^
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65 | \item \code{nugget}{: optional nugget effect}
| ^
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66 | \item \code{covtype}{: covariance of the GP model (default "matern5_2")}
| ^
checkRd: (-1) easyEGO.Rd:67: Lost braces
67 | \item \code{optim.method}{: optimisation of the GP hyperparameters (default "BFGS")}
| ^
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68 | \item \code{multistart}{: number of restarts of BFGS}
| ^
checkRd: (-1) easyEGO.Rd:69: Lost braces
69 | \item \code{gpmean.trick, gpmean.freq}{: Boolean and integer, resp., for the gpmean trick}
| ^
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70 | \item \code{scaling}{: Boolean, activates input scaling}
| ^
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71 | \item \code{warping}{: Boolean, activates output warping}
| ^
checkRd: (-1) easyEGO.Rd:72: Lost braces
72 | \item \code{TR}{: Boolean, activates TREGO instead of EGO}
| ^
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73 | \item \code{trcontrol}{: list of parameters of the trust region, see \code{\link[DiceOptim]{TREGO.nsteps}}}
| ^
checkRd: (-1) easyEGO.Rd:74: Lost braces
74 | \item \code{always.sample}{: Boolean, activates force observation even if it leads to poor conditioning}
| ^
checkRd: (-1) easyEGO.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) easyEGO.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) easyEGO.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) easyEGO.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) easyEGO.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) easyEGO.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) easyEGO.cst.Rd:74-75: Lost braces
74 | \item \code{method}{: choice of constrained improvement function: "\code{AL}", "\code{EFI}" or "\code{SUR}"
| ^
checkRd: (-1) easyEGO.cst.Rd:76: Lost braces
76 | \item \code{trace}{: if positive, tracing information on the progress of the optimization is produced.}
| ^
checkRd: (-1) easyEGO.cst.Rd:77-78: Lost braces
77 | \item \code{inneroptim}{: choice of the inner optimization algorithm: "\code{genoud}" or "\code{random}"
| ^
checkRd: (-1) easyEGO.cst.Rd:79: Lost braces
79 | \item \code{maxit}{: maximum number of iterations of the inner loop. }
| ^
checkRd: (-1) easyEGO.cst.Rd:80: Lost braces
80 | \item \code{seed}{: to fix the random variable generator}
| ^
checkRd: (-1) easyEGO.cst.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) easyEGO.cst.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) easyEGO.cst.Rd:56-57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) integration_design_cst.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) integration_design_cst.Rd:62-63: Lost braces in \itemize; \value handles \item{}{} directly
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking compiled code ... OK
- checking examples ... [6s/7s] OK
- checking PDF version of manual ... [6s/7s] OK
- DONE
Status: 1 NOTE
- using check arguments '--no-clean-on-error '