* installing *source* package ‘BigDataStatMeth’ ... ** this is package ‘BigDataStatMeth’ version ‘1.0.3’ ** package ‘BigDataStatMeth’ successfully unpacked and MD5 sums checked ** using staged installation zlib 1.2.11 is available ok ./configure: line 91: clang -arch arm64 -std=gnu2x: command not found *** OpenMP not supported! BigDataStatMeth uses OpenMP to automatically *** parallelize operations like sorting, grouping, file reading, etc. *** For details on how to install the necessary toolchains on your OS see: *** https://github.com/Rdatatable/BigDataStatMeth/wiki/Installation *** Continuing installation without OpenMP support... ** libs using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’ using C++17 using SDK: ‘MacOSX11.3.1.sdk’ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_CholeskyDec.cpp -o hdf5_CholeskyDec.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_QRDecomposition.cpp -o hdf5_QRDecomposition.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_SVD.cpp -o hdf5_SVD.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_SolveEqation.cpp -o hdf5_SolveEqation.o clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_applyFunction.cpp -o hdf5_applyFunction.o In file included from hdf5_applyFunction.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from In file included from In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from In file included from hdf5_SolveEqation.cpphdf5_QRDecomposition.cpp:1In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCoreIn file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:hdf5_CholeskyDec.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:hdf5_SVD.cpp61: 1:: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:In file included from ::61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:61../inst/include/BigDataStatMeth.hpp: 273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ 2731: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h: :40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26In file included from : In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: ../inst/include/BigDataStatMeth.hpp:40:/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h273/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:::13: warning: variable 'count' set but not used [-Wunused-but-set-variable]273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] :29: Index count = 0; ^ : In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse: Index count = 0;13 ^ 26: warning: variable 'count' set but not used [-Wunused-but-set-variable]In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse: 26 Index count = 0; ^ : In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h: Index count = 0; ^273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_SVD.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:In file included from hdf5_SolveEqation.cpp:29In file included from In file included from hdf5_CholeskyDec.cpp:1: In file included from hdf5_QRDecomposition.cpp: ../inst/include/BigDataStatMeth.hpp1In file included from In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:RcppExports.cpp:40: :291In file included from hdf5_applyFunction.cpp:26:: 4In file included from In file included from : : : : In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25In file included from ../inst/include/BigDataStatMeth.hpp:40/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h: : In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:29: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.hIn file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from :/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseIn file included from 25In file included from In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29:: 29: In file included from : :../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from 29In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse::35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 29In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:: Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9:: :35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h: 29: In file included from ^ In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29In file included from warning: : variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] : Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h78:9: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:35: :/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h 29: ^ warning: :/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]:79In file included from In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU :/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU78::99:79 Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree : warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 35 Index nsuper_et = 0; // Number of relaxed snodes in the original etree :: 35 warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] ^: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h9 ^/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: : Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree : : warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] ^ Index nsuper_et = 0; // Number of relaxed snodes in the original etree /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:78 warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h9 Index nsuper_et = 0; // Number of relaxed snodes in the original etree :78:9: warning: ^variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] ^ : :9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79 :9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h ^ Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ :79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_CholeskyDec.cpp:In file included from 1In file included from : In file included from RcppExports.cpphdf5_SolveEqation.cppIn file included from :1: In file included from ../inst/include/BigDataStatMeth.hpp:In file included from hdf5_applyFunction.cpp:26: In file included from hdf5_SVD.cpp../inst/include/BigDataStatMeth.hpp../inst/include/BigDataStatMeth.hppIn file included from 4:hdf5_QRDecomposition.cpp: :4040:40: : : In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: ::1: In file included from In file included from In file included from In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.hIn file included from ../inst/include/BigDataStatMeth.hpp:1:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:::46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h25: 25: In file included from : In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.hIn file included from :31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers::25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from 72../inst/include/BigDataStatMeth.hppIn file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:::31: :72:10::In file included from 46:46: 40/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers : : /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: 10/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:In file included from variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; warning: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h ^ variable 'replacements' set but not used [-Wunused-but-set-variable] warning: variable 'replacements' set but not used [-Wunused-but-set-variable] ::25: In file included from 72:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: Index replacements = 0;variable 'replacements' set but not used [-Wunused-but-set-variable] : /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h Index replacements = 0; ^ Index replacements = 0; :1031: In file included from :/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46 warning: ^: ^/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.hvariable 'replacements' set but not used [-Wunused-but-set-variable] : Index replacements = 0; 72:10: warning: ^ variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_SolveEqation.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from RcppExports.cpp:4: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25In file included from hdf5_SVD.cppIn file included from In file included from hdf5_applyFunction.cpp:26: In file included from : hdf5_CholeskyDec.cpp:1: ../inst/include/BigDataStatMeth.hpp:40: :In file included from In file included from In file included from ../inst/include/BigDataStatMeth.hppIn file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:125:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h: hdf5_QRDecomposition.cppIn file included from ../inst/include/BigDataStatMeth.hpp:: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h40In file included from ::/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h: 25:371:37: : : In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: In file included from : In file included from In file included from In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:../inst/include/BigDataStatMeth.hpp25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: :40: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtrawarning: 246::variable 'count' set but not used [-Wunused-but-set-variable]In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: 457: warning: variable 'count' set but not used [-Wunused-but-set-variable] : /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h::In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:3724637:7: warning: : : In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246 int count = 0; ^ variable 'count' set but not used [-Wunused-but-set-variable] int count = 0;:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0;246 ^ ^ :7: int count = 0; ^ warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_bdPCA.cpp -o hdf5_bdPCA.o In file included from hdf5_bdPCA.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_bdPCA.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_bdPCA.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_bdPCA.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_bindDatasets.cpp -o hdf5_bindDatasets.o In file included from hdf5_bindDatasets.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_bindDatasets.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_bindDatasets.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_bindDatasets.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_blockCrossprod.cpp -o hdf5_blockCrossprod.o In file included from hdf5_blockCrossprod.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_blockCrossprod.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_blockCrossprod.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_blockCrossprod.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_blockNormalization.cpp -o hdf5_blockNormalization.o In file included from hdf5_blockNormalization.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_blockNormalization.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_blockNormalization.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_blockNormalization.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_blockSum.cpp -o hdf5_blockSum.o In file included from hdf5_blockSum.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_blockSum.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_blockSum.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_blockSum.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_blockmult.cpp -o hdf5_blockmult.o 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_blockmultSparse.cpp -o hdf5_blockmultSparse.o 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_blocksubstract.cpp -o hdf5_blocksubstract.o In file included from hdf5_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from hdf5_blockmultSparse.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_blockmultSparse.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_blockmultSparse.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_blocksubstract.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_blocksubstract.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_blocksubstract.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_blockmultSparse.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from hdf5_blocksubstract.cpp:27: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_blocktCrossprod.cpp -o hdf5_blocktCrossprod.o In file included from hdf5_blocktCrossprod.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_blocktCrossprod.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_blocktCrossprod.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_blocktCrossprod.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_createDiagonalDataset.cpp -o hdf5_createDiagonalDataset.o 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_createEmptyDataset.cpp -o hdf5_createEmptyDataset.o In file included from hdf5_createDiagonalDataset.cpp:6: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_createDiagonalDataset.cpp:6: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_createDiagonalDataset.cpp:6: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_createDiagonalDataset.cpp:6: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from hdf5_createEmptyDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_createEmptyDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_createEmptyDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_createEmptyDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_createGroup.cpp -o hdf5_createGroup.o 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_createMatrix.cpp -o hdf5_createMatrix.o In file included from hdf5_createGroup.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_createGroup.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_createGroup.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ 5 warnings generated. In file included from hdf5_createGroup.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_diagonalOperations.cpp -o hdf5_diagonalOperations.o In file included from hdf5_createMatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_createMatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_createMatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_createMatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from hdf5_diagonalOperations.cpp:46: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_diagonalOperations.cpp:46: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_diagonalOperations.cpp:46: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_diagonalOperations.cpp:46: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_eigenDecomposition.cpp -o hdf5_eigenDecomposition.o In file included from hdf5_eigenDecomposition.cpp:9: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_eigenDecomposition.cpp:9: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_eigenDecomposition.cpp:9: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_eigenDecomposition.cpp:9: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_fileLocked.cpp -o hdf5_fileLocked.o 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_getDatasetDimensions.cpp -o hdf5_getDatasetDimensions.o In file included from hdf5_fileLocked.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_fileLocked.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_fileLocked.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_fileLocked.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from hdf5_getDatasetDimensions.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_getDatasetDimensions.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_getDatasetDimensions.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_getDatasetDimensions.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_getDatasetList.cpp -o hdf5_getDatasetList.o In file included from hdf5_getDatasetList.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_getDatasetList.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_getDatasetList.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_getDatasetList.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_getMatrixProperties.cpp -o hdf5_getMatrixProperties.o In file included from hdf5_getMatrixProperties.cpp:10: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_getMatrixProperties.cpp:10: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_getMatrixProperties.cpp:10: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_getMatrixProperties.cpp:10: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_importFile.cpp -o hdf5_importFile.o 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_imputation.cpp -o hdf5_imputation.o In file included from hdf5_importFile.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_importFile.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_importFile.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_importFile.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from hdf5_imputation.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_imputation.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_imputation.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_imputation.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_invCholesky.cpp -o hdf5_invCholesky.o In file included from hdf5_invCholesky.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_invCholesky.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_invCholesky.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_invCholesky.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_matrixCorrelation.cpp -o hdf5_matrixCorrelation.o In file included from hdf5_matrixCorrelation.cpp:14: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_matrixCorrelation.cpp:14: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_matrixCorrelation.cpp:14: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_matrixCorrelation.cpp:14: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_matrixDiagonals.cpp -o hdf5_matrixDiagonals.o 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_matrixSdMean.cpp -o hdf5_matrixSdMean.o In file included from hdf5_matrixDiagonals.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_matrixDiagonals.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_matrixDiagonals.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_matrixDiagonals.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from hdf5_matrixSdMean.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_matrixSdMean.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_matrixSdMean.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_matrixSdMean.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_moveDataset.cpp -o hdf5_moveDataset.o In file included from hdf5_moveDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_moveDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_moveDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_moveDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_pseudoinverse.cpp -o hdf5_pseudoinverse.o In file included from hdf5_pseudoinverse.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_pseudoinverse.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_pseudoinverse.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_pseudoinverse.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_reduceDataset.cpp -o hdf5_reduceDataset.o 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_removeElement.cpp -o hdf5_removeElement.o In file included from hdf5_reduceDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_reduceDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_reduceDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_reduceDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_removeLowData.cpp -o hdf5_removeLowData.o In file included from hdf5_removeElement.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_removeElement.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_removeElement.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_removeElement.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from hdf5_removeLowData.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_removeLowData.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_removeLowData.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_removeLowData.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_removeMAF.cpp -o hdf5_removeMAF.o In file included from hdf5_removeMAF.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_removeMAF.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_removeMAF.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_removeMAF.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_sortDataset.cpp -o hdf5_sortDataset.o In file included from hdf5_sortDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_sortDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_sortDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_sortDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_splitDataset.cpp -o hdf5_splitDataset.o In file included from hdf5_splitDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_splitDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_splitDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_splitDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_subsetDataset.cpp -o hdf5_subsetDataset.o In file included from hdf5_subsetDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_subsetDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_subsetDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_subsetDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_triangular.cpp -o hdf5_triangular.o In file included from hdf5_triangular.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_triangular.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_triangular.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_triangular.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_vectormatrix.cpp -o hdf5_vectormatrix.o In file included from hdf5_vectormatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_vectormatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_vectormatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from hdf5_vectormatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c hdf5_writeDimnames.cpp -o hdf5_writeDimnames.o In file included from hdf5_writeDimnames.cpp:30: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from hdf5_writeDimnames.cpp:30: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from hdf5_writeDimnames.cpp:30: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c mem_blockmult.cpp -o mem_blockmult.o In file included from hdf5_writeDimnames.cpp:30: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from mem_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from mem_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from mem_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from mem_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c mem_blocksubstract.cpp -o mem_blocksubstract.o In file included from mem_blocksubstract.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from mem_blocksubstract.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from mem_blocksubstract.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from mem_blocksubstract.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c mem_blocksum.cpp -o mem_blocksum.o In file included from mem_blocksum.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from mem_blocksum.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from mem_blocksum.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from mem_blocksum.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c mem_correlation.cpp -o mem_correlation.o In file included from mem_correlation.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from mem_correlation.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from mem_correlation.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from mem_correlation.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c mem_crossprod.cpp -o mem_crossprod.o 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c mem_scalarprod.cpp -o mem_scalarprod.o In file included from mem_crossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from mem_crossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from mem_crossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from mem_crossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c mem_tcrossprod.cpp -o mem_tcrossprod.o In file included from mem_scalarprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from mem_scalarprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from mem_scalarprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/Rcpp/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include' -I'/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/include' -I'/Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/BH/include' -I/opt/R/arm64/include -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fPIC -falign-functions=64 -Wall -g -O2 -c mem_weightprod.cpp -o mem_weightprod.o In file included from mem_scalarprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from mem_tcrossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from mem_tcrossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from mem_tcrossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from mem_tcrossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ In file included from mem_weightprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:26: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseCore:61: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] Index count = 0; ^ In file included from mem_weightprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/Sparse:29: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/SparseLU:35: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree ^ /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] Index nsuper_et = 0; // Number of relaxed snodes in the original etree ^ In file included from mem_weightprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:31: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] Index replacements = 0; ^ In file included from mem_weightprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigen.h:25: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/RcppEigenForward.h:37: In file included from /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] int count = 0; ^ 5 warnings generated. 5 warnings generated. 5 warnings generated. 5 warnings generated. 5 warnings generated. 5 warnings generated. clang++ -arch arm64 -std=gnu++17 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o BigDataStatMeth.so RcppExports.o hdf5_CholeskyDec.o hdf5_QRDecomposition.o hdf5_SVD.o hdf5_SolveEqation.o hdf5_applyFunction.o hdf5_bdPCA.o hdf5_bindDatasets.o hdf5_blockCrossprod.o hdf5_blockNormalization.o hdf5_blockSum.o hdf5_blockmult.o hdf5_blockmultSparse.o hdf5_blocksubstract.o hdf5_blocktCrossprod.o hdf5_createDiagonalDataset.o hdf5_createEmptyDataset.o hdf5_createGroup.o hdf5_createMatrix.o hdf5_diagonalOperations.o hdf5_eigenDecomposition.o hdf5_fileLocked.o hdf5_getDatasetDimensions.o hdf5_getDatasetList.o hdf5_getMatrixProperties.o hdf5_importFile.o hdf5_imputation.o hdf5_invCholesky.o hdf5_matrixCorrelation.o hdf5_matrixDiagonals.o hdf5_matrixSdMean.o hdf5_moveDataset.o hdf5_pseudoinverse.o hdf5_reduceDataset.o hdf5_removeElement.o hdf5_removeLowData.o hdf5_removeMAF.o hdf5_sortDataset.o hdf5_splitDataset.o hdf5_subsetDataset.o hdf5_triangular.o hdf5_vectormatrix.o hdf5_writeDimnames.o mem_blockmult.o mem_blocksubstract.o mem_blocksum.o mem_correlation.o mem_crossprod.o mem_scalarprod.o mem_tcrossprod.o mem_weightprod.o -lz -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath /Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/lib/libhdf5_cpp.a /Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/lib/libhdf5.a -L/Volumes/Builds/packages/big-sur-arm64/extralib/4.5/Rhdf5lib/lib -lcrypto -lcurl -lsz -laec -lz -ldl -lm -F/Library/Frameworks/R.framework/.. -framework R ld: warning: could not create compact unwind for ___emutls_get_address: does not use standard frame ld: warning: could not create compact unwind for _allocate_tramp_ctrl: does not use standard frame ld: warning: could not create compact unwind for ___gcc_nested_func_ptr_created: does not use standard frame ld: warning: could not create compact unwind for ___gcc_nested_func_ptr_deleted: does not use standard frame installing to /Volumes/Builds/packages/big-sur-arm64/results/4.5/BigDataStatMeth.Rcheck/00LOCK-BigDataStatMeth/00new/BigDataStatMeth/libs ** generating debug symbols (dSYM) ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BigDataStatMeth)