* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’ * installing *source* package ‘tiledb’ ... ** package ‘tiledb’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether g++-14 -std=gnu++17 accepts -g... yes checking for g++-14 -std=gnu++17 option to enable C++11 features... none needed checking how to run the C++ preprocessor... g++-14 -std=gnu++17 -E checking whether the compiler supports GNU C++... (cached) yes checking whether g++-14 -std=gnu++17 accepts -g... (cached) yes checking for g++-14 -std=gnu++17 option to enable C++11 features... (cached) none needed checking whether g++-14 -std=gnu++17 supports C++17 features by default... yes checking for pkg-config... /usr/bin/pkg-config checking if pkg-config knows TileDB... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for filesystem... yes checking for tiledb/tiledb... no downloading x86_64 TileDB library... installing TileDB for Debian GNU/Linux:... downloading https://github.com/TileDB-Inc/TileDB/releases/download/2.26.2/tiledb-linux-x86_64-2.26.2-30fc114.tar.gz using inst/tiledb/{lib,include} configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpayE0pM/R.INSTALL152f31a964926/tiledb/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c arrowio.cpp -o arrowio.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c batched.cpp -o batched.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c column_buffer.cpp -o column_buffer.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c deprecation.cpp -o deprecation.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c durations.cpp -o durations.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c libtiledb.cpp -o libtiledb.o gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c nanoarrow.c -o nanoarrow.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c nullable.cpp -o nullable.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c shmem.cpp -o shmem.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c virtualfile.cpp -o virtualfile.o gcc-14 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I. -I../inst/include/ -I../inst/tiledb/include -DTILEDB_SILENT_BUILD -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppInt64/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/nanoarrow/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c connection/connection.c -o connection/connection.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o tiledb.so RcppExports.o arrowio.o batched.o column_buffer.o deprecation.o durations.o libtiledb.o nanoarrow.o nullable.o shmem.o virtualfile.o -ltiledb -L../inst/tiledb/lib -Wl,-rpath,$ORIGIN/../tiledb/lib -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpayE0pM/R.INSTALL152f31a964926/tiledb/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpayE0pM/R.INSTALL152f31a964926/tiledb/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpayE0pM/R.INSTALL152f31a964926/tiledb/src' installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-tiledb/00new/tiledb/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tiledb)