- using R version 4.2.3 (2023-03-15)
- using platform: x86_64-pc-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘spatPomp/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘spatPomp’ version ‘0.31.0.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘spatPomp’ can be installed ... OK
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [28s/35s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking examples ... [3s/3s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [49s/75s] OK
Running ‘abf.R’ [0s/1s]
Running ‘abfir.R’ [0s/1s]
Running ‘bm.R’ [10s/14s]
Comparing ‘bm.Rout’ to ‘bm.Rout.save’ ... OK
Running ‘bm2.R’ [5s/7s]
Comparing ‘bm2.Rout’ to ‘bm2.Rout.save’ ... OK
Running ‘bpfilter.R’ [0s/1s]
Running ‘enkf.R’ [0s/1s]
Running ‘gbm.R’ [4s/6s]
Comparing ‘gbm.Rout’ to ‘gbm.Rout.save’ ... OK
Running ‘girf.R’ [0s/1s]
Running ‘he10.R’ [6s/9s]
Comparing ‘he10.Rout’ to ‘he10.Rout.save’ ... OK
Running ‘ibpf.R’ [0s/1s]
Running ‘ienkf.R’ [0s/1s]
Running ‘igirf.R’ [0s/1s]
Running ‘iter_filter.R’ [2s/3s]
Comparing ‘iter_filter.Rout’ to ‘iter_filter.Rout.save’ ... OK
Running ‘iubf.R’ [0s/0s]
Running ‘lorenz.R’ [4s/6s]
Comparing ‘lorenz.Rout’ to ‘lorenz.Rout.save’ ... OK
Running ‘measles.R’ [11s/17s]
Comparing ‘measles.Rout’ to ‘measles.Rout.save’ ... OK
Running ‘pfilter.R’ [0s/1s]
Running ‘plot.R’ [0s/1s]
Running ‘simulate.R’ [0s/1s]
Running ‘spatPomp.R’ [0s/0s]
Running ‘xtests.R’ [2s/3s]
- checking PDF version of manual ... OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK