* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’ * installing *source* package ‘sglOptim’ ... ** package ‘sglOptim’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-5) 13.2.0’ make[1]: Entering directory '/tmp/Rtmpu2RpiO/R.INSTALL2bceeb3929c41d/sglOptim/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'../inst/include' -fpic -g -O2 -Wall -pedantic -mtune=native -c only_for_testing.cpp -o only_for_testing.o In file included from only_for_testing.cpp:44: ../inst/include/sgl.h:48: warning: "NDEBUG" redefined 48 | #define NDEBUG | <command-line>: note: this is the location of the previous definition In file included from /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:17, from ../inst/include/sgl.h:70: /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 361 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) ) | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/detail/sp_counted_impl.hpp:35, from /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/detail/shared_count.hpp:27: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template<typename> class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:250:65: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 250 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template<typename> class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:507:31: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 507 | explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn() | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template<typename> class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:520:22: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 520 | shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn() | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template<typename> class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:603:34: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 603 | shared_ptr & operator=( std::auto_ptr<Y> & r ) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template<typename> class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:612:34: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 612 | shared_ptr & operator=( std::auto_ptr<Y> && r ) | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template<typename> class auto_ptr; | ^~~~~~~~ /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’: /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/BH/include/boost/smart_ptr/shared_ptr.hpp:614:38: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 614 | this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this ); | ^~~~~~~~ /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template<typename> class auto_ptr; | ^~~~~~~~ g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o sglOptim.so only_for_testing.o -llapack -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/Rtmpu2RpiO/R.INSTALL2bceeb3929c41d/sglOptim/src' make[1]: Entering directory '/tmp/Rtmpu2RpiO/R.INSTALL2bceeb3929c41d/sglOptim/src' make[1]: Leaving directory '/tmp/Rtmpu2RpiO/R.INSTALL2bceeb3929c41d/sglOptim/src' installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-sglOptim/00new/sglOptim/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sglOptim)