* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’
* installing *source* package ‘sequoia’ ...
** this is package ‘sequoia’ version ‘3.0.3’
** package ‘sequoia’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-5) 14.3.0’
using Fortran compiler: ‘GNU Fortran (Debian 14.3.0-5) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpb4siH8/R.INSTALL3481463734645c/sequoia/src'
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c MkRelA.f90 -o MkRelA.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c Sequoia.f90 -o Sequoia.o
Sequoia.f90:3919:58:
3919 | double precision :: LLcp(3,2), LLU(4), U, ALR(3,2), ALRtmp, LLtmp, LLtrio(6), &
| 1
Warning: Unused variable ‘alrtmp’ declared at (1) [-Wunused-variable]
Sequoia.f90:16054:47:
16054 | integer :: i, r, AncB(2,mxA), Bi, AncBi(2, mxA), catA, catB, GA(2), catG, &
| 1
Warning: Unused variable ‘ancbi’ declared at (1) [-Wunused-variable]
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c SimGenoErrors.f90 -o SimGenoErrors.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c ester.f90 -o ester.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pretty_R_print.c -o pretty_R_print.o
gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o sequoia.so MkRelA.o Sequoia.o SimGenoErrors.o ester.o init.o pretty_R_print.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpb4siH8/R.INSTALL3481463734645c/sequoia/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpb4siH8/R.INSTALL3481463734645c/sequoia/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpb4siH8/R.INSTALL3481463734645c/sequoia/src'
installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-sequoia/00new/sequoia/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (sequoia)