* installing to library ‘/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages’
* installing *source* package ‘rpsurv’ ...
** this is package ‘rpsurv’ version ‘0.7.1’
** package ‘rpsurv’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
specified C++17
using C++ compiler: ‘g++-16 (Debian 16.2.0-1) 16.2.0’
using C++17
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1Bxz9n/R.INSTALL16d18e56fc868d/rpsurv/src'
g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I../inst/include -DRCPP_PARALLEL_USE_TBB=0 -I/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I../inst/include -DRCPP_PARALLEL_USE_TBB=0 -I/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcs_basis.cpp -o rcs_basis.o
g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I../inst/include -DRCPP_PARALLEL_USE_TBB=0 -I/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppParallel/include -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rpsurv_loglik.cpp -o rpsurv_loglik.o
rpsurv_loglik.cpp: In member function ‘virtual void RPLogLikGrad::operator()(std::size_t, std::size_t)’:
rpsurv_loglik.cpp:123:43: warning: ‘te.ScaleTerms::dlogS_deta’ may be used uninitialized [-Wmaybe-uninitialized]
123 | if (entry) dli -= te.dlogS_deta * Xentry(i, k);
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
rpsurv_loglik.cpp:91:18: note: ‘te.ScaleTerms::dlogS_deta’ was declared here
91 | ScaleTerms te;
| ^~
rpsurv_loglik.cpp:111:25: warning: ‘te.ScaleTerms::logS’ may be used uninitialized [-Wmaybe-uninitialized]
111 | if (entry) li -= te.logS;
| ~~~^~~~~~~~~~
rpsurv_loglik.cpp:91:18: note: ‘te.ScaleTerms::logS’ was declared here
91 | ScaleTerms te;
| ^~
g++-16 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o rpsurv.so RcppExports.o rcs_basis.o rpsurv_loglik.o -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1Bxz9n/R.INSTALL16d18e56fc868d/rpsurv/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1Bxz9n/R.INSTALL16d18e56fc868d/rpsurv/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1Bxz9n/R.INSTALL16d18e56fc868d/rpsurv/src'
installing to /home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/00LOCK-rpsurv/00new/rpsurv/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rpsurv)